© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9496.t1 |
| Gene name | |
| Location | scaffold_088:16373..18299 |
| Strand | - |
| Gene length (bp) | 1926 |
| Transcript length (bp) | 1602 |
| Coding sequence length (bp) | 1602 |
| Protein length (aa) | 534 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 5.4E-57 | 77 | 499 |
| PF00324 | AA_permease | Amino acid permease | 5.5E-25 | 75 | 517 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 79 | 22 |
| 2 | 89 | 108 | 19 |
| 3 | 142 | 164 | 22 |
| 4 | 179 | 201 | 22 |
| 5 | 208 | 230 | 22 |
| 6 | 250 | 272 | 22 |
| 7 | 293 | 315 | 22 |
| 8 | 335 | 357 | 22 |
| 9 | 387 | 409 | 22 |
| 10 | 419 | 441 | 22 |
| 11 | 454 | 476 | 22 |
| 12 | 491 | 513 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9496.t1 MAFESGRIEGQIHVEGSENVEKASKGLVAPKYMGTIRDQRDMSALGRVQVLRRNFRFVSILGFGCTLISTWEVIL TLLTSGLTDGGTAGLIWGFIIVTAGFALVFASIAEMASMSPTSGGQYHWVSEFAPRRGQKFLSYITGWLCATGWQ CAIVAIAYLAGTIIQGLIVLNRPTYEFERWHGTLLVIAITAFSILFNTFLAKNLPMVEGLILIIHVVGLFAIIIP LWVLAPRNSAKAVFTEFYDGGEWGSPGTATLVGLSTTITSMIGYDCSVHMSEEIKDASETLPKAMMSAVGVNGIL GFIMIVTLCFTLGDVNNILQSPTGFPFIQIFYNTTRSYAAANTMTAILIITLTASTITEVATASRQLWSFARDQG LPFSSFFAYVTPGWNIPLNSVLVSLVVTAILSLINIGSNLALNAVISLTITSLMSAYILSIGCVLLKRLRGEKLP PRRWSLGRFGMTINIASLAFLFPIFVFSFFPLTKTVDAHSMNWSIVMYMAMVSFASVYYYFWGRYQFIAPVALVK RDIDLDDM* |
| Coding | >Ani_SJS100_1|g9496.t1 ATGGCTTTTGAGAGTGGCAGGATTGAAGGGCAAATACATGTGGAGGGCTCTGAAAATGTTGAGAAAGCATCAAAG GGCCTCGTGGCCCCCAAGTACATGGGTACTATCAGAGACCAGCGCGATATGAGTGCTCTGGGCCGTGTCCAGGTT TTAAGGCGGAATTTCAGATTCGTCTCGATTCTAGGGTTCGGCTGTACGTTGATTTCCACATGGGAGGTCATCTTA ACGTTATTGACCAGTGGTCTGACAGATGGAGGAACCGCTGGGTTAATATGGGGTTTCATTATCGTCACAGCAGGT TTCGCGCTCGTCTTTGCCAGCATAGCTGAGATGGCTTCTATGTCACCAACATCGGGGGGTCAATACCACTGGGTA TCAGAATTCGCTCCACGCAGGGGACAGAAGTTTTTGAGCTATATAACGGGATGGCTTTGTGCAACGGGCTGGCAA TGTGCCATTGTAGCCATTGCATATCTGGCAGGTACTATAATCCAAGGATTGATAGTGCTAAATCGTCCAACATAC GAATTCGAGCGGTGGCACGGTACTCTGCTTGTTATAGCTATCACAGCATTTTCTATCTTATTCAACACGTTCCTA GCCAAGAACCTGCCTATGGTTGAGGGTCTGATACTCATTATCCATGTTGTGGGCCTATTTGCTATCATTATCCCA CTATGGGTACTTGCTCCTCGAAATAGCGCAAAGGCTGTCTTCACCGAATTCTACGATGGAGGCGAATGGGGAAGT CCTGGCACCGCTACGCTTGTCGGCTTGTCGACCACTATAACTTCCATGATTGGATACGATTGCTCAGTCCATATG TCTGAAGAAATCAAGGACGCATCAGAGACACTTCCCAAGGCTATGATGTCTGCAGTGGGTGTCAATGGTATCCTC GGTTTTATTATGATTGTTACCCTGTGCTTCACCCTGGGTGATGTCAACAACATCTTGCAAAGTCCGACTGGATTT CCGTTCATTCAGATATTCTACAACACTACCCGTAGCTACGCGGCAGCAAACACCATGACAGCCATCCTTATCATC ACGCTGACCGCTAGCACGATCACTGAGGTAGCCACAGCATCCCGCCAGCTGTGGTCATTCGCGCGAGACCAAGGA CTTCCATTCTCATCTTTTTTTGCCTACGTCACTCCTGGCTGGAACATACCCCTCAACTCCGTCCTCGTCTCACTC GTTGTGACCGCGATCTTAAGCCTCATCAATATCGGGTCCAACCTAGCTCTGAACGCTGTTATCTCACTAACAATA ACATCGCTCATGTCAGCATACATCCTGTCCATTGGGTGTGTTCTGCTGAAGCGACTGCGCGGAGAAAAGCTCCCA CCGCGACGGTGGTCGCTCGGTCGGTTCGGAATGACCATCAACATAGCTAGTCTGGCGTTTCTCTTTCCGATATTT GTCTTTTCGTTCTTTCCACTTACAAAGACTGTCGATGCGCATAGTATGAACTGGAGTATCGTTATGTACATGGCA ATGGTTAGCTTTGCGTCGGTGTATTATTACTTCTGGGGGAGATACCAGTTCATTGCACCGGTAGCGTTGGTGAAG CGGGACATTGATCTGGATGATATGTGA |
| Transcript | >Ani_SJS100_1|g9496.t1 ATGGCTTTTGAGAGTGGCAGGATTGAAGGGCAAATACATGTGGAGGGCTCTGAAAATGTTGAGAAAGCATCAAAG GGCCTCGTGGCCCCCAAGTACATGGGTACTATCAGAGACCAGCGCGATATGAGTGCTCTGGGCCGTGTCCAGGTT TTAAGGCGGAATTTCAGATTCGTCTCGATTCTAGGGTTCGGCTGTACGTTGATTTCCACATGGGAGGTCATCTTA ACGTTATTGACCAGTGGTCTGACAGATGGAGGAACCGCTGGGTTAATATGGGGTTTCATTATCGTCACAGCAGGT TTCGCGCTCGTCTTTGCCAGCATAGCTGAGATGGCTTCTATGTCACCAACATCGGGGGGTCAATACCACTGGGTA TCAGAATTCGCTCCACGCAGGGGACAGAAGTTTTTGAGCTATATAACGGGATGGCTTTGTGCAACGGGCTGGCAA TGTGCCATTGTAGCCATTGCATATCTGGCAGGTACTATAATCCAAGGATTGATAGTGCTAAATCGTCCAACATAC GAATTCGAGCGGTGGCACGGTACTCTGCTTGTTATAGCTATCACAGCATTTTCTATCTTATTCAACACGTTCCTA GCCAAGAACCTGCCTATGGTTGAGGGTCTGATACTCATTATCCATGTTGTGGGCCTATTTGCTATCATTATCCCA CTATGGGTACTTGCTCCTCGAAATAGCGCAAAGGCTGTCTTCACCGAATTCTACGATGGAGGCGAATGGGGAAGT CCTGGCACCGCTACGCTTGTCGGCTTGTCGACCACTATAACTTCCATGATTGGATACGATTGCTCAGTCCATATG TCTGAAGAAATCAAGGACGCATCAGAGACACTTCCCAAGGCTATGATGTCTGCAGTGGGTGTCAATGGTATCCTC GGTTTTATTATGATTGTTACCCTGTGCTTCACCCTGGGTGATGTCAACAACATCTTGCAAAGTCCGACTGGATTT CCGTTCATTCAGATATTCTACAACACTACCCGTAGCTACGCGGCAGCAAACACCATGACAGCCATCCTTATCATC ACGCTGACCGCTAGCACGATCACTGAGGTAGCCACAGCATCCCGCCAGCTGTGGTCATTCGCGCGAGACCAAGGA CTTCCATTCTCATCTTTTTTTGCCTACGTCACTCCTGGCTGGAACATACCCCTCAACTCCGTCCTCGTCTCACTC GTTGTGACCGCGATCTTAAGCCTCATCAATATCGGGTCCAACCTAGCTCTGAACGCTGTTATCTCACTAACAATA ACATCGCTCATGTCAGCATACATCCTGTCCATTGGGTGTGTTCTGCTGAAGCGACTGCGCGGAGAAAAGCTCCCA CCGCGACGGTGGTCGCTCGGTCGGTTCGGAATGACCATCAACATAGCTAGTCTGGCGTTTCTCTTTCCGATATTT GTCTTTTCGTTCTTTCCACTTACAAAGACTGTCGATGCGCATAGTATGAACTGGAGTATCGTTATGTACATGGCA ATGGTTAGCTTTGCGTCGGTGTATTATTACTTCTGGGGGAGATACCAGTTCATTGCACCGGTAGCGTTGGTGAAG CGGGACATTGATCTGGATGATATGTGA |
| Gene | >Ani_SJS100_1|g9496.t1 ATGGCTTTTGAGAGTGGCAGGATTGAAGGGCAAATACATGTGGAGGGCTCTGAAAATGTTGAGAAAGCATCAAAG GGCCTCGTGGCCCCCAAGTACATGGGTACTATCAGAGACCAGCGCGATATGAGTGCTCTGGGCCGTGTCCAGGTT TTAAGGGTTAGGATGCTGTGTTCATGCTATAGCTGCCTTATTCTAATGCAAGATAGCGGAATTTCAGATTCGTCT CGATTCTAGGGTTCGGCTGTACGTTGATTTCCACATGGGAGGTCATCTTAACGTGAGCACTACTACAGACACTGT GGATTATTGGCTAATCAATGAGTAGGTTATTGACCAGTGGTCTGACAGATGGAGGAACCGCTGGGTTAATATGGG GTTTCATTATCGTCACAGCAGGTTTCGCGCTCGTCTTTGCCAGCATAGCTGAGATGGCTTCTATGTACGTTTCGC AGCCCTTGGGTACTTAATGTCTGGAAGGAGAGTCGAGCGCATTCTAATACTTGATCAAAGGTCACCAACATCGGG GGGTCAATACCACTGGGTATCAGAATTCGCTCCACGCAGGGGACAGAAGTTTTTGAGCTATATAACGGGTATGTC GAGGATATGCGCTCTTCCAAGTCAAGTCTGACAAAGAAAATAGGATGGCTTTGTGCAACGGGCTGGCAATGTGCC ATTGTAGCCATTGCATATCTGGCAGGTACTATAATCCAAGGATTGATAGTGCTAAATCGTCCAACATACGAATTC GAGCGGTGGCACGGTACTCTGCTTGTTATAGCTATCACAGCATTTTCTATCTTATTCAACACGTTCCTAGCCAAG AACCTGCCTATGGTTGAGGGTCTGATACTCATTATCCATGTTGTGGGCCTATTTGCTATCATTATCCCACTATGG GTACTTGCTCCTCGAAATAGCGCAAAGGCTGTCTTCACCGAATTCTACGATGGAGGCGAATGGGGAAGTCCTGGC ACCGCTACGCTTGTCGGCTTGTCGACCACTATAACTTCCATGATTGGATACGATTGCTCAGTCCATATGTGTAAG CGCCTCTTGCATTACTGGAAACATGATGCTAACACAAACCTAGCTGAAGAAATCAAGGACGCATCAGAGACACTT CCCAAGGCTATGATGTCTGCAGTGGGTGTCAATGGTATCCTCGGTTTTATTATGATTGTTACCCTGTGCTTCACC CTGGGTGATGTCAACAACATCTTGCAAAGTCCGACTGGATTTCCGTTCATTCAGATATTCTACAACACTACCCGT AGCTACGCGGCAGCAAACACCATGACAGCCATCCTTATCATCACGCTGACCGCTAGCACGATCACTGAGGTAGCC ACAGCATCCCGCCAGCTGTGGTCATTCGCGCGAGACCAAGGACTTCCATTCTCATCTTTTTTTGCCTACGTAAGT GCTTCCATGCAACAGCTACTAACACCGCTGATTCCTGTTGTAACCACGCAGGTCACTCCTGGCTGGAACATACCC CTCAACTCCGTCCTCGTCTCACTCGTTGTGACCGCGATCTTAAGCCTCATCAATATCGGGTCCAACCTAGCTCTG AACGCTGTTATCTCACTAACAATAACATCGCTCATGTCAGCATACATCCTGTCCATTGGGTGTGTTCTGCTGAAG CGACTGCGCGGAGAAAAGCTCCCACCGCGACGGTGGTCGCTCGGTCGGTTCGGAATGACCATCAACATAGCTAGT CTGGCGTTTCTCTTTCCGATATTTGTCTTTTCGTTCTTTCCACTTACAAAGACTGTCGATGCGCATAGTATGAAC TGGAGTATCGTTATGTACATGGCAATGGTTAGCTTTGCGTCGGTGTATTATTACTTCTGGGGGAGATACCAGTTC ATTGCACCGGTAGCGTTGGTGAAGCGGGACATTGATCTGGATGATATGTGA |