© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9482.t1 |
| Gene name | |
| Location | scaffold_087:53789..55013 |
| Strand | + |
| Gene length (bp) | 1224 |
| Transcript length (bp) | 1224 |
| Coding sequence length (bp) | 1224 |
| Protein length (aa) | 408 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02317 | Octopine_DH | NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain | 2.5E-43 | 194 | 341 |
| PF01210 | NAD_Gly3P_dh_N | NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus | 1.2E-06 | 11 | 113 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046168 | glycerol-3-phosphate catabolic process | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0051287 | NAD binding | Yes |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Yes |
| GO:0009056 | catabolic process | No |
| GO:0036094 | small molecule binding | No |
| GO:0052646 | alditol phosphate metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0046434 | organophosphate catabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006072 | glycerol-3-phosphate metabolic process | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901136 | carbohydrate derivative catabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
| GO:0008150 | biological_process | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9482.t1 MTAGSFDPLSSVTVIGAGPCGCAFAADLASRGKCVLLYGHPDHRGAIPMIESNGGWLNATGEISGRYQIKTTSDL DLAIQHSNFIVTTVPSYGQDTILQLLSQFDLQRHTLIVNVGNFFYLAARQKVNALAILETDISPYAVRIIGDTVF VKGVKKSLAIWAWPPPAQAEPLKRHAELGRRRQVESIFSQNLVWCQNLLQVGLNNINPVVHCPAALMNVGWIEAT KGDFYFYAQGMSTSVSRVTEKVDQERLAIARAYGLDLVSITTYMNQNYQHDTEFGNYHEFAVGSVIHNKTKSAPT TMKHRYLLEDILYGMVPWYELGLKCGLASPTIRSLIEIASVVSGFDYLGTGRTLKAAGLGEATKEQVLIAMGGSV NEAPDVVSSPSDAPVNKTLDSHAPLQTLQLAV* |
| Coding | >Ani_SJS100_1|g9482.t1 ATGACCGCTGGCAGCTTCGATCCATTGTCGTCGGTCACCGTCATCGGTGCTGGTCCCTGCGGATGTGCCTTTGCC GCCGACCTGGCCAGCCGTGGGAAGTGTGTCCTGCTCTACGGTCACCCCGACCACCGTGGTGCCATCCCCATGATT GAGAGTAACGGCGGGTGGTTGAACGCAACCGGGGAGATCAGCGGCAGATATCAGATCAAAACTACCAGCGACCTG GATCTCGCCATTCAACACTCCAACTTCATCGTAACCACCGTCCCCTCATACGGACAAGATACTATACTCCAGCTC CTCAGCCAATTTGACCTGCAACGTCACACCCTCATCGTCAACGTGGGCAACTTCTTCTACCTCGCTGCCCGCCAA AAGGTCAACGCCCTCGCCATCCTCGAAACTGACATCTCCCCCTACGCCGTCCGGATCATAGGCGACACGGTGTTC GTCAAGGGCGTCAAGAAAAGTCTGGCCATTTGGGCCTGGCCCCCACCAGCACAGGCTGAGCCCCTGAAGCGTCAC GCAGAGCTCGGTCGCCGCCGACAGGTCGAGTCGATCTTCTCGCAGAACCTGGTGTGGTGTCAGAACCTGCTTCAG GTCGGCCTGAACAACATTAACCCAGTCGTGCACTGCCCAGCGGCACTCATGAACGTGGGCTGGATCGAGGCTACC AAAGGTGACTTCTACTTCTACGCGCAGGGTATGTCGACCTCCGTCTCGCGGGTGACGGAGAAGGTGGACCAGGAG CGCCTGGCTATTGCTCGCGCTTACGGGCTCGACCTCGTCTCCATCACAACATACATGAATCAGAACTACCAGCAT GACACGGAATTCGGTAATTACCATGAGTTCGCTGTGGGATCGGTTATCCACAACAAGACCAAGAGCGCGCCAACG ACCATGAAGCACCGCTACCTTTTGGAGGATATCCTCTACGGGATGGTCCCATGGTACGAGCTCGGTCTGAAGTGT GGTCTGGCGTCGCCGACTATCCGGTCTCTGATAGAGATCGCTTCGGTCGTGAGCGGCTTCGACTACCTCGGGACC GGGAGGACTCTGAAGGCAGCTGGTCTTGGCGAGGCCACCAAGGAGCAGGTTCTGATCGCCATGGGTGGGTCCGTC AACGAAGCTCCAGATGTGGTTTCTTCTCCGTCGGACGCACCTGTCAACAAGACGCTTGATTCTCATGCTCCGCTT CAGACATTGCAGTTGGCTGTTTGA |
| Transcript | >Ani_SJS100_1|g9482.t1 ATGACCGCTGGCAGCTTCGATCCATTGTCGTCGGTCACCGTCATCGGTGCTGGTCCCTGCGGATGTGCCTTTGCC GCCGACCTGGCCAGCCGTGGGAAGTGTGTCCTGCTCTACGGTCACCCCGACCACCGTGGTGCCATCCCCATGATT GAGAGTAACGGCGGGTGGTTGAACGCAACCGGGGAGATCAGCGGCAGATATCAGATCAAAACTACCAGCGACCTG GATCTCGCCATTCAACACTCCAACTTCATCGTAACCACCGTCCCCTCATACGGACAAGATACTATACTCCAGCTC CTCAGCCAATTTGACCTGCAACGTCACACCCTCATCGTCAACGTGGGCAACTTCTTCTACCTCGCTGCCCGCCAA AAGGTCAACGCCCTCGCCATCCTCGAAACTGACATCTCCCCCTACGCCGTCCGGATCATAGGCGACACGGTGTTC GTCAAGGGCGTCAAGAAAAGTCTGGCCATTTGGGCCTGGCCCCCACCAGCACAGGCTGAGCCCCTGAAGCGTCAC GCAGAGCTCGGTCGCCGCCGACAGGTCGAGTCGATCTTCTCGCAGAACCTGGTGTGGTGTCAGAACCTGCTTCAG GTCGGCCTGAACAACATTAACCCAGTCGTGCACTGCCCAGCGGCACTCATGAACGTGGGCTGGATCGAGGCTACC AAAGGTGACTTCTACTTCTACGCGCAGGGTATGTCGACCTCCGTCTCGCGGGTGACGGAGAAGGTGGACCAGGAG CGCCTGGCTATTGCTCGCGCTTACGGGCTCGACCTCGTCTCCATCACAACATACATGAATCAGAACTACCAGCAT GACACGGAATTCGGTAATTACCATGAGTTCGCTGTGGGATCGGTTATCCACAACAAGACCAAGAGCGCGCCAACG ACCATGAAGCACCGCTACCTTTTGGAGGATATCCTCTACGGGATGGTCCCATGGTACGAGCTCGGTCTGAAGTGT GGTCTGGCGTCGCCGACTATCCGGTCTCTGATAGAGATCGCTTCGGTCGTGAGCGGCTTCGACTACCTCGGGACC GGGAGGACTCTGAAGGCAGCTGGTCTTGGCGAGGCCACCAAGGAGCAGGTTCTGATCGCCATGGGTGGGTCCGTC AACGAAGCTCCAGATGTGGTTTCTTCTCCGTCGGACGCACCTGTCAACAAGACGCTTGATTCTCATGCTCCGCTT CAGACATTGCAGTTGGCTGTTTGA |
| Gene | >Ani_SJS100_1|g9482.t1 ATGACCGCTGGCAGCTTCGATCCATTGTCGTCGGTCACCGTCATCGGTGCTGGTCCCTGCGGATGTGCCTTTGCC GCCGACCTGGCCAGCCGTGGGAAGTGTGTCCTGCTCTACGGTCACCCCGACCACCGTGGTGCCATCCCCATGATT GAGAGTAACGGCGGGTGGTTGAACGCAACCGGGGAGATCAGCGGCAGATATCAGATCAAAACTACCAGCGACCTG GATCTCGCCATTCAACACTCCAACTTCATCGTAACCACCGTCCCCTCATACGGACAAGATACTATACTCCAGCTC CTCAGCCAATTTGACCTGCAACGTCACACCCTCATCGTCAACGTGGGCAACTTCTTCTACCTCGCTGCCCGCCAA AAGGTCAACGCCCTCGCCATCCTCGAAACTGACATCTCCCCCTACGCCGTCCGGATCATAGGCGACACGGTGTTC GTCAAGGGCGTCAAGAAAAGTCTGGCCATTTGGGCCTGGCCCCCACCAGCACAGGCTGAGCCCCTGAAGCGTCAC GCAGAGCTCGGTCGCCGCCGACAGGTCGAGTCGATCTTCTCGCAGAACCTGGTGTGGTGTCAGAACCTGCTTCAG GTCGGCCTGAACAACATTAACCCAGTCGTGCACTGCCCAGCGGCACTCATGAACGTGGGCTGGATCGAGGCTACC AAAGGTGACTTCTACTTCTACGCGCAGGGTATGTCGACCTCCGTCTCGCGGGTGACGGAGAAGGTGGACCAGGAG CGCCTGGCTATTGCTCGCGCTTACGGGCTCGACCTCGTCTCCATCACAACATACATGAATCAGAACTACCAGCAT GACACGGAATTCGGTAATTACCATGAGTTCGCTGTGGGATCGGTTATCCACAACAAGACCAAGAGCGCGCCAACG ACCATGAAGCACCGCTACCTTTTGGAGGATATCCTCTACGGGATGGTCCCATGGTACGAGCTCGGTCTGAAGTGT GGTCTGGCGTCGCCGACTATCCGGTCTCTGATAGAGATCGCTTCGGTCGTGAGCGGCTTCGACTACCTCGGGACC GGGAGGACTCTGAAGGCAGCTGGTCTTGGCGAGGCCACCAAGGAGCAGGTTCTGATCGCCATGGGTGGGTCCGTC AACGAAGCTCCAGATGTGGTTTCTTCTCCGTCGGACGCACCTGTCAACAAGACGCTTGATTCTCATGCTCCGCTT CAGACATTGCAGTTGGCTGTTTGA |