© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9468.t1 |
| Gene name | |
| Location | scaffold_086:123127..124024 |
| Strand | - |
| Gene length (bp) | 897 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 786 |
| Protein length (aa) | 262 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 23 | 19 |
| 2 | 30 | 52 | 22 |
| 3 | 62 | 81 | 19 |
| 4 | 94 | 116 | 22 |
| 5 | 131 | 153 | 22 |
| 6 | 173 | 195 | 22 |
| 7 | 210 | 232 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9468.t1 MNGIFAADLAAYLILSPTVIYIFIAHRWTGFLAWYSLIMFCSARVIGGALGVRDSSSMAANIIQSVGITPLILCV DGLVHEARTYRFPHASRRLNWSVVIGTSVTMVVAISLSIKACLDIFENKAQSDDYSLWKAGSSLTVVVWLFQIGW SVYSLQFHDKGIQGPGYQGGTVLLQGALVALAFIGVRVIYALVAVCTESKDLSPVYGLMSVRVILMFLPELFATV TMIVVGVRTRHLRELKDETDYGKLDVVQPTSVGIAA* |
| Coding | >Ani_SJS100_1|g9468.t1 ATGAACGGAATATTTGCGGCCGATCTTGCGGCTTATCTGATCCTCTCGCCGACTGTCATCTACATATTCATAGCT CACCGATGGACCGGGTTTTTAGCCTGGTACTCCCTAATAATGTTCTGTTCCGCTCGAGTTATTGGAGGTGCTCTA GGAGTTCGCGACAGCAGCAGCATGGCAGCGAATATTATCCAGAGCGTGGGAATCACGCCTTTAATTTTATGCGTT GACGGATTGGTCCATGAAGCCCGAACGTATCGCTTTCCCCATGCCAGCCGTCGCCTCAATTGGTCCGTCGTGATT GGAACATCAGTTACCATGGTGGTAGCTATAAGTCTTTCTATCAAGGCATGTCTGGACATTTTCGAGAACAAAGCA CAGTCCGACGATTATTCATTATGGAAGGCTGGATCATCCCTGACCGTTGTGGTTTGGCTCTTCCAGATTGGGTGG TCGGTTTACTCCCTACAATTCCACGATAAAGGAATTCAAGGTCCGGGATATCAAGGCGGCACTGTGCTCCTTCAG GGTGCGCTGGTTGCACTAGCATTCATTGGTGTCCGTGTCATCTACGCACTTGTTGCTGTTTGTACCGAGAGTAAA GATCTTAGTCCAGTGTATGGACTAATGTCCGTCCGCGTTATTCTCATGTTCCTGCCGGAGTTGTTTGCGACCGTA ACCATGATCGTCGTGGGTGTCCGCACCAGACATCTCCGAGAACTGAAAGACGAAACGGACTATGGAAAGCTTGAT GTGGTCCAGCCCACTTCGGTTGGCATTGCGGCTTAG |
| Transcript | >Ani_SJS100_1|g9468.t1 ATGAACGGAATATTTGCGGCCGATCTTGCGGCTTATCTGATCCTCTCGCCGACTGTCATCTACATATTCATAGCT CACCGATGGACCGGGTTTTTAGCCTGGTACTCCCTAATAATGTTCTGTTCCGCTCGAGTTATTGGAGGTGCTCTA GGAGTTCGCGACAGCAGCAGCATGGCAGCGAATATTATCCAGAGCGTGGGAATCACGCCTTTAATTTTATGCGTT GACGGATTGGTCCATGAAGCCCGAACGTATCGCTTTCCCCATGCCAGCCGTCGCCTCAATTGGTCCGTCGTGATT GGAACATCAGTTACCATGGTGGTAGCTATAAGTCTTTCTATCAAGGCATGTCTGGACATTTTCGAGAACAAAGCA CAGTCCGACGATTATTCATTATGGAAGGCTGGATCATCCCTGACCGTTGTGGTTTGGCTCTTCCAGATTGGGTGG TCGGTTTACTCCCTACAATTCCACGATAAAGGAATTCAAGGTCCGGGATATCAAGGCGGCACTGTGCTCCTTCAG GGTGCGCTGGTTGCACTAGCATTCATTGGTGTCCGTGTCATCTACGCACTTGTTGCTGTTTGTACCGAGAGTAAA GATCTTAGTCCAGTGTATGGACTAATGTCCGTCCGCGTTATTCTCATGTTCCTGCCGGAGTTGTTTGCGACCGTA ACCATGATCGTCGTGGGTGTCCGCACCAGACATCTCCGAGAACTGAAAGACGAAACGGACTATGGAAAGCTTGAT GTGGTCCAGCCCACTTCGGTTGGCATTGCGGCTTAG |
| Gene | >Ani_SJS100_1|g9468.t1 ATGAACGGAATATTTGCGGCCGATCTTGCGGCTTATCTGATCCTCTCGCCGACTGTCATCTACATATTCATAGCT CACCGATGGACCGGGTTTTTAGCCTGGTACTCCCTAATAATGTTCTGTTCCGCTCGAGTTATTGGAGGTGCTCTA GGAGTTCGCGACAGCAGCAGCATGGCAGCGAATATTATCCAGAGCGTGGGAATCACGCCTTTAATTTTATGCGTT GACGGATTGGTCCATGAAGCGTACGTTCACGCCTCAAGATATGCTAGATCCGGTACTAAATTAGCAACAGCCGAA CGTATCGCTTTCCCCATGCCAGCCGTCGCCTCAATTGGTCCGTCGTGATTGGAACATCAGTTACCATGGTGGTAG CTATAAGTCTTTCTATCAAGGCATGTCTGGACATTTTCGAGAACAAAGCACAGTCCGACGATTATTCATTATGGA AGGCTGGATCATCCCTGACCGTTGTGGTTTGGCTCTTCCAGATTGGGTGGTCGGTTTACTCCCTACAATTCCACG ATAAAGGAATTCAAGGTCCGGGATATCAAGGCGGCACTGTGGTGAGTATTGCGTACCTCTCATCTTGATACTTAC CATTACTTGGCTAACATGTGTTTACAGCTCCTTCAGGGTGCGCTGGTTGCACTAGCATTCATTGGTGTCCGTGTC ATCTACGCACTTGTTGCTGTTTGTACCGAGAGTAAAGATCTTAGTCCAGTGTATGGACTAATGTCCGTCCGCGTT ATTCTCATGTTCCTGCCGGAGTTGTTTGCGACCGTAACCATGATCGTCGTGGGTGTCCGCACCAGACATCTCCGA GAACTGAAAGACGAAACGGACTATGGAAAGCTTGATGTGGTCCAGCCCACTTCGGTTGGCATTGCGGCTTAG |