© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9440.t1 |
| Gene name | |
| Location | scaffold_086:43978..45895 |
| Strand | + |
| Gene length (bp) | 1917 |
| Transcript length (bp) | 1629 |
| Coding sequence length (bp) | 1629 |
| Protein length (aa) | 543 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 6.8E-113 | 52 | 511 |
| PF13520 | AA_permease_2 | Amino acid permease | 8.1E-29 | 55 | 474 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 55 | 74 | 19 |
| 2 | 84 | 106 | 22 |
| 3 | 119 | 141 | 22 |
| 4 | 161 | 183 | 22 |
| 5 | 190 | 212 | 22 |
| 6 | 242 | 264 | 22 |
| 7 | 283 | 302 | 19 |
| 8 | 406 | 428 | 22 |
| 9 | 455 | 477 | 22 |
| 10 | 487 | 504 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9440.t1 MDDIHNTQKDPDVFISPTLEPGPALPKVGDRTPRIVHDEEAQNLRKGLQERHTQMIAIAGAIGTGLFLGLGSSIQ TGGPLGALLGYLLIGLVVCAVQIALGEVSALMPVTGSFVRHVELLVDPALGFAIGWNVVYGCFMSVPSEISAAVV LIQYWNDTLNPAIWVTILIVISAIVSFLFIRVYGEVEFVFAILKILLIIGIILMGLVIDLGGVSGTPRLGFHYWK DPGPFVEYIASGPWGRFLGFWAVTTNAVYSFSGVESLTIAAAEMANPRQNIPRACKRVFARVTIFYFLAVLIVGM IVPSNDPRLGNESGTAAQSPFVIAASDAGIKVVPSIINAVVLTSAWSASNQSILAGTRTLYGLALKGHAPAVFLR TTRHGVPYACAVAQISVSALAYLTCQNEAYTVFNWLLDLTAAGVLISWGTIALNHIRLMRGFRAQGLDTAEMPWH HWWSVYTSWFALVMCVIVLFTGGFTVFTHGNWDASSFVSSYLDIPLVLAFYLGYKFHRKTEMVSSYEMPLEQALL ECRNDPDNTLGCTFLGK* |
| Coding | >Ani_SJS100_1|g9440.t1 ATGGATGATATCCATAACACCCAAAAAGACCCAGATGTCTTCATCTCGCCCACCCTCGAACCAGGCCCTGCGCTC CCCAAAGTCGGAGACCGCACACCACGTATCGTCCACGATGAAGAGGCCCAGAATCTACGCAAGGGGTTGCAGGAG CGCCATACCCAGATGATAGCCATCGCGGGCGCCATTGGAACCGGCCTCTTCCTCGGTCTAGGCAGCTCGATCCAA ACCGGTGGCCCGCTCGGCGCTCTACTCGGTTATCTACTGATCGGCCTGGTGGTCTGCGCGGTGCAAATCGCCCTA GGCGAAGTGTCAGCCCTGATGCCCGTGACCGGCTCTTTTGTCCGACACGTCGAGCTGCTCGTCGATCCGGCTCTC GGGTTCGCAATAGGCTGGAACGTCGTCTACGGTTGCTTCATGTCCGTGCCCAGCGAGATCTCCGCAGCTGTCGTC CTAATCCAGTACTGGAACGACACCCTCAATCCCGCTATCTGGGTGACGATCCTGATCGTCATCTCGGCAATCGTC TCGTTCCTCTTCATCCGAGTCTACGGAGAAGTTGAGTTCGTCTTCGCCATCCTCAAGATCCTCCTCATCATCGGC ATCATCCTCATGGGCTTGGTGATCGACCTCGGCGGCGTCTCGGGTACTCCACGTCTCGGATTCCATTACTGGAAA GACCCCGGCCCGTTCGTGGAATACATCGCCTCGGGCCCGTGGGGCCGATTCCTCGGTTTCTGGGCCGTCACGACA AACGCAGTTTATTCCTTCTCCGGGGTGGAAAGTCTAACCATCGCGGCAGCGGAAATGGCGAATCCAAGACAGAAT ATCCCCCGCGCGTGTAAACGCGTCTTTGCGCGCGTTACCATCTTCTACTTTTTGGCTGTGCTAATCGTGGGGATG ATAGTCCCTAGTAACGATCCCCGACTGGGAAATGAATCTGGCACGGCCGCGCAGAGTCCGTTCGTAATTGCGGCT TCCGATGCGGGGATCAAAGTAGTGCCTTCTATTATCAATGCCGTGGTGTTGACGTCTGCGTGGTCAGCGTCAAAT CAGAGTATCCTGGCTGGAACGCGCACGTTGTATGGTCTTGCGCTGAAGGGCCACGCACCGGCGGTGTTTCTGCGC ACAACGAGGCACGGTGTGCCGTATGCTTGTGCGGTGGCGCAGATTTCTGTGTCCGCGTTGGCGTACCTTACGTGT CAGAATGAGGCATATACGGTTTTCAATTGGTTGTTGGATTTGACGGCAGCGGGGGTGTTGATCTCGTGGGGGACG ATTGCGTTGAATCATATTAGGTTGATGAGAGGGTTCAGGGCGCAGGGATTGGATACGGCGGAAATGCCGTGGCAT CATTGGTGGTCTGTGTATACATCCTGGTTTGCTCTGGTGATGTGTGTGATTGTTTTGTTCACGGGCGGGTTCACG GTGTTTACTCATGGCAATTGGGATGCTTCGAGCTTCGTGTCGTCGTATTTGGACATTCCGCTCGTACTGGCTTTC TATCTGGGCTATAAGTTTCACCGCAAGACAGAGATGGTATCGAGTTATGAGATGCCGCTGGAGCAGGCTCTGCTC GAGTGTCGGAACGACCCAGATAATACCTTGGGATGCACATTCTTAGGAAAGTGA |
| Transcript | >Ani_SJS100_1|g9440.t1 ATGGATGATATCCATAACACCCAAAAAGACCCAGATGTCTTCATCTCGCCCACCCTCGAACCAGGCCCTGCGCTC CCCAAAGTCGGAGACCGCACACCACGTATCGTCCACGATGAAGAGGCCCAGAATCTACGCAAGGGGTTGCAGGAG CGCCATACCCAGATGATAGCCATCGCGGGCGCCATTGGAACCGGCCTCTTCCTCGGTCTAGGCAGCTCGATCCAA ACCGGTGGCCCGCTCGGCGCTCTACTCGGTTATCTACTGATCGGCCTGGTGGTCTGCGCGGTGCAAATCGCCCTA GGCGAAGTGTCAGCCCTGATGCCCGTGACCGGCTCTTTTGTCCGACACGTCGAGCTGCTCGTCGATCCGGCTCTC GGGTTCGCAATAGGCTGGAACGTCGTCTACGGTTGCTTCATGTCCGTGCCCAGCGAGATCTCCGCAGCTGTCGTC CTAATCCAGTACTGGAACGACACCCTCAATCCCGCTATCTGGGTGACGATCCTGATCGTCATCTCGGCAATCGTC TCGTTCCTCTTCATCCGAGTCTACGGAGAAGTTGAGTTCGTCTTCGCCATCCTCAAGATCCTCCTCATCATCGGC ATCATCCTCATGGGCTTGGTGATCGACCTCGGCGGCGTCTCGGGTACTCCACGTCTCGGATTCCATTACTGGAAA GACCCCGGCCCGTTCGTGGAATACATCGCCTCGGGCCCGTGGGGCCGATTCCTCGGTTTCTGGGCCGTCACGACA AACGCAGTTTATTCCTTCTCCGGGGTGGAAAGTCTAACCATCGCGGCAGCGGAAATGGCGAATCCAAGACAGAAT ATCCCCCGCGCGTGTAAACGCGTCTTTGCGCGCGTTACCATCTTCTACTTTTTGGCTGTGCTAATCGTGGGGATG ATAGTCCCTAGTAACGATCCCCGACTGGGAAATGAATCTGGCACGGCCGCGCAGAGTCCGTTCGTAATTGCGGCT TCCGATGCGGGGATCAAAGTAGTGCCTTCTATTATCAATGCCGTGGTGTTGACGTCTGCGTGGTCAGCGTCAAAT CAGAGTATCCTGGCTGGAACGCGCACGTTGTATGGTCTTGCGCTGAAGGGCCACGCACCGGCGGTGTTTCTGCGC ACAACGAGGCACGGTGTGCCGTATGCTTGTGCGGTGGCGCAGATTTCTGTGTCCGCGTTGGCGTACCTTACGTGT CAGAATGAGGCATATACGGTTTTCAATTGGTTGTTGGATTTGACGGCAGCGGGGGTGTTGATCTCGTGGGGGACG ATTGCGTTGAATCATATTAGGTTGATGAGAGGGTTCAGGGCGCAGGGATTGGATACGGCGGAAATGCCGTGGCAT CATTGGTGGTCTGTGTATACATCCTGGTTTGCTCTGGTGATGTGTGTGATTGTTTTGTTCACGGGCGGGTTCACG GTGTTTACTCATGGCAATTGGGATGCTTCGAGCTTCGTGTCGTCGTATTTGGACATTCCGCTCGTACTGGCTTTC TATCTGGGCTATAAGTTTCACCGCAAGACAGAGATGGTATCGAGTTATGAGATGCCGCTGGAGCAGGCTCTGCTC GAGTGTCGGAACGACCCAGATAATACCTTGGGATGCACATTCTTAGGAAAGTGA |
| Gene | >Ani_SJS100_1|g9440.t1 ATGGATGATATCCATAACACCCAAAAAGACCCAGATGTCTTCATCTCGCCCACCCTCGAACCAGGCCCTGCGCTC CCCAAAGTCGGAGACCGCACACCACGTATCGTCCACGATGAAGAGGCCCAGAATCTACGCAAGGGGTTGCAGGAG CGCCATACCCAGATGATAGCCATCGCGGGCGCCATTGTACGTCAATTCCCATCTTTACAATTTGAAATGTTCATA TTTGTACGACGTACTGAATAAATATCCCACCAGGGAACCGGCCTCTTCCTCGGTCTAGGCAGCTCGATCCAAACC GGTGGCCCGCTCGGCGCTCTACTCGGTTATCTACTGATCGGCCTGGTGGTCTGCGCGGTGCAAATCGCCCTAGGC GAAGTGTCAGCCCTGATGCCCGTGACCGGCTCTTTTGTCCGACACGTCGAGCTGCTCGTCGATCCGGCTCTCGGG TTCGCAATAGGCTGGAACGTCGTCTACGGTTGCTTCATGTCCGTGCCCAGCGAGATCTCCGCAGCTGTCGTCCTA ATCCAGTACTGGAACGACACCCTCAATCCCGCTATCTGGGTGACGATCCTGATCGTCATCTCGGCAATCGTCTCG TTCCTCTTCATCCGAGTCTACGGAGAAGTTGAGTTCGTCTTCGCCATCCTCAAGATCCTCCTCATCATCGGCATC ATCCTCATGGGCTTGGTGATCGACCTCGGCGGCGTCTCGGGTACTCCACGTCTCGGATTCCATTACTGGAAAGAC CCCGGCCCGTTCGTGGAATACATCGCCTCGGGCCCGTGGGGCCGATTCCTCGGTTTCTGGGCCGTCACGACAAAC GCAGTTTATTCCTTCTCCGGGGTGGAAAGTCTAACCATCGCGGCAGCGGAAATGGCGAATCCAAGACAGAATATC CCCCGCGCGTGTAAACGCGTCTTTGCGCGCGTTACCATCTTCTACTTTTTGGCTGTGCTAATCGTGGGGATGATA GTCCCTAGTAACGATCCCCGACTGGGAAATGAATCTGGCACGGCCGCGCAGAGTCCGTTCGTAATTGCGGCTTCC GATGCGGGGATCAAAGTAGTGCCTTCTATTATCAATGCCGTGGTGTTGACGTCTGCGTGGTCAGCGTCAAATCAG AGTATCCTGGCTGGAACGCGCACGTTGTATGGTCTTGCGCTGAAGGGCCACGCACCGGCGGTGTTTCTGCGCACA ACGAGGCACGGTGTGCCGTATGCTTGTGCGGTGGCGCAGATTTCTGTGTCCGCGTTGGCGTACCTTACGTGTCAG AATGAGGCATATACGGTTTTCAATTGGTTGTTGGATTTGACGGCAGCGGGGGTGTTGATCTCGTGGGGGACGATT GCGTTGAATCATATTAGGTTGATGAGAGGGTTCAGGGCGCAGGGATTGGATACGGCGGAAATGCCGTGGCATCAT TGGTGGTCTGGTGAGTTATTTGAATATTCTACAGGTATTGACTGTGGCTGATGAAAGCAGTGTATACATCCTGGT TTGCTCTGGTGATGTGTGTGATTGTTTTGTTCACGGGCGGGTTCACGGTGTTTACTCATGGCAATTGGGATGCTT CGAGCTTCGTGTCGTCGTATTTGTGAGTCAGATTCTGTGTTGATGGATGATGTTGTACTAACTGAGTGGTAGGGA CATTCCGCTCGTACTGGCTTTCTATCTGGGCTATAAGTTTCACCGCAAGACAGAGATGGTATCGAGTTATGAGAT GCCGCTGGAGCAGGCTCTGCTCGAGTGTCGGAACGACCCAGATAATGTACCCATCCAGAGGAGCAAGTGGTCGAG GTGGAACATTTTGTGGGGATGATAGACCTTGGGATGCACATTCTTGTAGGTAGGTCAGGTTATCCCACAAAACTA CATCAATAGACTGACACATGTACCGCACTCAGAGGAAAGTGA |