Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9425.t1
Gene name
Locationscaffold_086:3751..4483
Strand-
Gene length (bp)732
Transcript length (bp)513
Coding sequence length (bp)513
Protein length (aa) 171

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12680 SnoaL_2 SnoaL-like domain 8.5E-09 46 149
PF13474 SnoaL_3 SnoaL-like domain 3.0E-08 40 159
PF13577 SnoaL_4 SnoaL-like domain 2.3E-07 35 154
PF14534 DUF4440 Domain of unknown function (DUF4440) 5.2E-07 40 151
PF02136 NTF2 Nuclear transport factor 2 (NTF2) domain 2.6E-04 43 152

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 65 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9425.t1
MRIFNETQTVIRKNSAFKPFPDTPGIGNSSVVPSTDTEEISTLLHAYGEALKSRNVDEAVALYTEDGVIMPPHFS
ASTGTEALRDSYTRIFATIQLVINFQIEEIVIMSPEWAFARTTAEGTKTILATQESESHANQELFILRRNNGKWL
IARYAFSSMKPFVQNGIRRS*
Coding >Ani_SJS100_1|g9425.t1
ATGCGCATCTTCAACGAGACCCAGACAGTCATTCGAAAGAACTCGGCCTTCAAGCCCTTTCCCGATACCCCAGGA
ATCGGCAACTCATCAGTAGTGCCTTCCACCGACACCGAAGAAATCTCTACCCTCCTCCATGCTTACGGCGAAGCT
CTGAAAAGCCGGAATGTGGACGAAGCAGTTGCCCTTTACACAGAAGATGGAGTCATCATGCCGCCGCATTTCTCG
GCCAGTACAGGGACAGAGGCTCTACGCGACTCATATACACGAATCTTTGCAACCATCCAGCTCGTTATCAATTTC
CAGATTGAGGAGATAGTTATCATGTCTCCGGAGTGGGCTTTCGCCAGGACGACGGCTGAGGGAACGAAGACGATA
CTTGCCACCCAGGAGTCTGAGTCACATGCGAATCAGGAATTGTTCATCTTGAGAAGGAATAATGGAAAGTGGCTC
ATTGCTAGATATGCCTTTTCTAGTATGAAGCCTTTCGTGCAGAATGGGATTCGAAGGAGTTAA
Transcript >Ani_SJS100_1|g9425.t1
ATGCGCATCTTCAACGAGACCCAGACAGTCATTCGAAAGAACTCGGCCTTCAAGCCCTTTCCCGATACCCCAGGA
ATCGGCAACTCATCAGTAGTGCCTTCCACCGACACCGAAGAAATCTCTACCCTCCTCCATGCTTACGGCGAAGCT
CTGAAAAGCCGGAATGTGGACGAAGCAGTTGCCCTTTACACAGAAGATGGAGTCATCATGCCGCCGCATTTCTCG
GCCAGTACAGGGACAGAGGCTCTACGCGACTCATATACACGAATCTTTGCAACCATCCAGCTCGTTATCAATTTC
CAGATTGAGGAGATAGTTATCATGTCTCCGGAGTGGGCTTTCGCCAGGACGACGGCTGAGGGAACGAAGACGATA
CTTGCCACCCAGGAGTCTGAGTCACATGCGAATCAGGAATTGTTCATCTTGAGAAGGAATAATGGAAAGTGGCTC
ATTGCTAGATATGCCTTTTCTAGTATGAAGCCTTTCGTGCAGAATGGGATTCGAAGGAGTTAA
Gene >Ani_SJS100_1|g9425.t1
ATGCGCATCTTCAACGAGACCCAGGTAGCTCTTGCAGCGAGACTTGAATCTATACTTCATGAGATTTCACACCCC
CACCTTGATAGGTGGGGGTACCCATTCTTGGACAGGAAGGCCGTATATAATGCCAGGCAGTCAGTCATTAACGCT
ATCAGGGTACTTGTAACTTGATTGACTGGCGTCATCAGACAGTCATTCGAAAGAACTCGGCCTTCAAGCCCTTTC
CCGATACCCCAGGAATCGGCAACTCATCAGTAGGTGCACCCATGATGGATACAAGTCCTTTATACGGCAAAGTCT
GACTCAATTGCAGTGCCTTCCACCGACACCGAAGAAATCTCTACCCTCCTCCATGCTTACGGCGAAGCTCTGAAA
AGCCGGAATGTGGACGAAGCAGTTGCCCTTTACACAGAAGATGGAGTCATCATGCCGCCGCATTTCTCGGCCAGT
ACAGGGACAGAGGCTCTACGCGACTCATATACACGAATCTTTGCAACCATCCAGCTCGTTATCAATTTCCAGATT
GAGGAGATAGTTATCATGTCTCCGGAGTGGGCTTTCGCCAGGACGACGGCTGAGGGAACGAAGACGATACTTGCC
ACCCAGGAGTCTGAGTCACATGCGAATCAGGAATTGTTCATCTTGAGAAGGAATAATGGAAAGTGGCTCATTGCT
AGATATGCCTTTTCTAGTATGAAGCCTTTCGTGCAGAATGGGATTCGAAGGAGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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