Protein ID | Ani_SJS100_1|g9403.t1 |
Gene name | |
Location | scaffold_085:60598..62486 |
Strand | - |
Gene length (bp) | 1888 |
Transcript length (bp) | 1827 |
Coding sequence length (bp) | 1827 |
Protein length (aa) | 609 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03151 | TPT | Triose-phosphate Transporter family | 5.1E-21 | 138 | 453 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 132 | 151 | 19 |
2 | 166 | 188 | 22 |
3 | 223 | 242 | 19 |
4 | 252 | 274 | 22 |
5 | 281 | 298 | 17 |
6 | 302 | 324 | 22 |
7 | 337 | 359 | 22 |
8 | 374 | 396 | 22 |
9 | 408 | 430 | 22 |
10 | 435 | 454 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9403.t1 MGVSPSGNHHRRRSSVLAGASQSAPIEHRDDIPRVIGDAAGSKREEPKSSPAEDADISDLSSIAESLEMDYISSD DDLHDDEETGLTAKQRRQRRRRRQQRRQLDARIADVKASKHDTLPLGFTDSDVFRRLSINAGLILLWYFFSLSIS IYNKWMFSDDDVVFPFPLFTTSLHMAVQFTFSSILLYLIPSLRPKAPAASTPTGSPVSEHDPFESRPVVTRFFYL TRLVPCGVATSLDIGLGNMSLKFISLTFLTMCKSSALAFVLLFAFVFRLETPSVKLIVIIATMTVGVVMMVAGET AFNAVGFILVIASAFFSGFRWGLTQILLLRHPATANPFSTLFFLTPVMFVSLIVIALAVEGPLEIIAGFQALAAA RGGLFAVFLLIFPGILAFCMISSEFALLKRSSVVTLSICGIFKEVVTISAAGVIFHDQLTAVNITGLVVTIGSIA SYNYMKISKMRSEAQKGAWTRSPNLDSEDDSDPTGERGEYRRIRNPETSTFQSPGIHVDEDNVNITPEDDLTAGG RRSFRVRASGASNALGLSINTTNLGDHDRNFSPRVSAPSPLKSAPPVITSLEAELNRSASGPSFGSKPQTSPERA SPEGRSAS* |
Coding | >Ani_SJS100_1|g9403.t1 ATGGGTGTCTCTCCGTCTGGCAATCATCATCGACGGCGGAGCTCAGTACTGGCGGGCGCTTCACAGTCAGCTCCA ATCGAGCATCGAGACGATATACCAAGGGTCATTGGGGACGCTGCCGGCTCAAAACGAGAGGAGCCCAAGTCCTCG CCGGCTGAGGACGCAGACATCTCGGACCTATCCTCGATCGCAGAGAGCTTGGAGATGGATTATATCAGCTCAGAC GACGACCTCCATGATGACGAAGAAACGGGCCTCACAGCGAAGCAGAGACGCCAGAGGCGCCGCAGAAGGCAGCAG CGGCGACAGTTGGATGCCCGTATCGCCGACGTCAAGGCCTCGAAGCACGATACATTACCGTTGGGGTTCACAGAT AGTGATGTCTTCAGGAGGCTGTCCATTAATGCGGGATTGATCCTGCTGTGGTATTTCTTTTCGCTGTCGATTTCA ATTTACAACAAGTGGATGTTCTCCGATGACGATGTTGTCTTTCCTTTCCCCCTCTTCACCACGAGCTTGCATATG GCCGTTCAGTTCACCTTCTCGTCGATACTCCTCTATTTGATACCCTCCCTGCGTCCGAAAGCGCCCGCTGCATCC ACACCTACAGGTTCGCCCGTGAGCGAGCATGATCCCTTTGAGTCCCGACCGGTGGTCACCCGGTTCTTCTACCTT ACACGTCTCGTCCCCTGCGGTGTGGCGACTTCCCTCGATATTGGACTGGGAAACATGTCCCTGAAGTTCATTTCC CTTACCTTCCTCACCATGTGCAAATCATCCGCCTTAGCATTCGTCCTTCTCTTTGCCTTCGTTTTCCGCCTCGAA ACCCCATCCGTCAAGTTGATCGTGATCATTGCTACGATGACCGTGGGTGTTGTCATGATGGTCGCCGGCGAGACC GCTTTCAATGCGGTTGGATTTATCCTCGTCATTGCATCGGCGTTCTTTTCGGGCTTCCGATGGGGCCTCACCCAG ATTCTCCTCCTACGCCATCCCGCGACGGCGAACCCGTTCTCCACCCTCTTCTTCCTTACGCCTGTGATGTTTGTC TCACTGATTGTCATTGCGCTGGCGGTAGAGGGGCCGTTGGAGATCATCGCTGGCTTCCAAGCCCTGGCGGCTGCC CGCGGGGGCCTGTTTGCTGTTTTCCTGCTGATCTTCCCTGGTATCCTGGCTTTCTGCATGATTTCCTCTGAGTTT GCGCTCCTCAAGCGCTCTTCGGTAGTGACGCTGAGCATTTGCGGCATCTTCAAGGAAGTCGTCACCATCAGTGCT GCTGGGGTCATCTTCCACGATCAGCTCACTGCAGTCAACATTACGGGCTTGGTGGTCACCATTGGCAGCATCGCG TCCTACAACTACATGAAGATCTCTAAAATGCGCTCAGAAGCCCAGAAGGGCGCGTGGACACGCAGTCCCAATCTG GACTCTGAGGACGACTCCGATCCGACTGGGGAGCGCGGAGAGTACCGACGGATCCGTAACCCTGAAACGAGCACT TTCCAATCTCCGGGTATCCATGTCGACGAGGACAATGTGAATATCACTCCTGAGGATGACTTGACCGCTGGCGGT CGGCGCTCATTCCGTGTTCGTGCCAGCGGCGCTAGCAATGCGCTCGGGTTAAGCATCAACACCACCAATCTCGGG GACCACGATAGAAATTTCTCCCCTCGAGTGTCGGCCCCCTCGCCCTTGAAATCGGCGCCCCCAGTCATCACGTCC CTGGAAGCTGAGCTTAATCGATCGGCTTCTGGCCCTAGCTTCGGAAGCAAGCCCCAGACATCTCCAGAACGGGCT TCACCGGAAGGACGCTCAGCTAGCTAG |
Transcript | >Ani_SJS100_1|g9403.t1 ATGGGTGTCTCTCCGTCTGGCAATCATCATCGACGGCGGAGCTCAGTACTGGCGGGCGCTTCACAGTCAGCTCCA ATCGAGCATCGAGACGATATACCAAGGGTCATTGGGGACGCTGCCGGCTCAAAACGAGAGGAGCCCAAGTCCTCG CCGGCTGAGGACGCAGACATCTCGGACCTATCCTCGATCGCAGAGAGCTTGGAGATGGATTATATCAGCTCAGAC GACGACCTCCATGATGACGAAGAAACGGGCCTCACAGCGAAGCAGAGACGCCAGAGGCGCCGCAGAAGGCAGCAG CGGCGACAGTTGGATGCCCGTATCGCCGACGTCAAGGCCTCGAAGCACGATACATTACCGTTGGGGTTCACAGAT AGTGATGTCTTCAGGAGGCTGTCCATTAATGCGGGATTGATCCTGCTGTGGTATTTCTTTTCGCTGTCGATTTCA ATTTACAACAAGTGGATGTTCTCCGATGACGATGTTGTCTTTCCTTTCCCCCTCTTCACCACGAGCTTGCATATG GCCGTTCAGTTCACCTTCTCGTCGATACTCCTCTATTTGATACCCTCCCTGCGTCCGAAAGCGCCCGCTGCATCC ACACCTACAGGTTCGCCCGTGAGCGAGCATGATCCCTTTGAGTCCCGACCGGTGGTCACCCGGTTCTTCTACCTT ACACGTCTCGTCCCCTGCGGTGTGGCGACTTCCCTCGATATTGGACTGGGAAACATGTCCCTGAAGTTCATTTCC CTTACCTTCCTCACCATGTGCAAATCATCCGCCTTAGCATTCGTCCTTCTCTTTGCCTTCGTTTTCCGCCTCGAA ACCCCATCCGTCAAGTTGATCGTGATCATTGCTACGATGACCGTGGGTGTTGTCATGATGGTCGCCGGCGAGACC GCTTTCAATGCGGTTGGATTTATCCTCGTCATTGCATCGGCGTTCTTTTCGGGCTTCCGATGGGGCCTCACCCAG ATTCTCCTCCTACGCCATCCCGCGACGGCGAACCCGTTCTCCACCCTCTTCTTCCTTACGCCTGTGATGTTTGTC TCACTGATTGTCATTGCGCTGGCGGTAGAGGGGCCGTTGGAGATCATCGCTGGCTTCCAAGCCCTGGCGGCTGCC CGCGGGGGCCTGTTTGCTGTTTTCCTGCTGATCTTCCCTGGTATCCTGGCTTTCTGCATGATTTCCTCTGAGTTT GCGCTCCTCAAGCGCTCTTCGGTAGTGACGCTGAGCATTTGCGGCATCTTCAAGGAAGTCGTCACCATCAGTGCT GCTGGGGTCATCTTCCACGATCAGCTCACTGCAGTCAACATTACGGGCTTGGTGGTCACCATTGGCAGCATCGCG TCCTACAACTACATGAAGATCTCTAAAATGCGCTCAGAAGCCCAGAAGGGCGCGTGGACACGCAGTCCCAATCTG GACTCTGAGGACGACTCCGATCCGACTGGGGAGCGCGGAGAGTACCGACGGATCCGTAACCCTGAAACGAGCACT TTCCAATCTCCGGGTATCCATGTCGACGAGGACAATGTGAATATCACTCCTGAGGATGACTTGACCGCTGGCGGT CGGCGCTCATTCCGTGTTCGTGCCAGCGGCGCTAGCAATGCGCTCGGGTTAAGCATCAACACCACCAATCTCGGG GACCACGATAGAAATTTCTCCCCTCGAGTGTCGGCCCCCTCGCCCTTGAAATCGGCGCCCCCAGTCATCACGTCC CTGGAAGCTGAGCTTAATCGATCGGCTTCTGGCCCTAGCTTCGGAAGCAAGCCCCAGACATCTCCAGAACGGGCT TCACCGGAAGGACGCTCAGCTAGCTAG |
Gene | >Ani_SJS100_1|g9403.t1 ATGGGTGTCTCTCCGTCTGGCAATCATCATCGACGGCGGAGCTCAGTACTGGCGGGCGCTTCACAGTCAGCTCCA ATCGAGCATCGAGACGATATACCAAGGGTCATTGGGGACGCTGCCGGCTCAAAACGAGAGGAGCCCAAGTCCTCG CCGGCTGAGGACGCAGACATCTCGGACCTATCCTCGATCGCAGAGAGCTTGGAGATGGATTATATCAGCTCAGAC GACGACCTCCATGATGACGAAGAAACGGGCCTCACAGCGAAGCAGAGACGCCAGAGGCGCCGCAGAAGGCAGCAG CGGCGACAGTTGGATGCCCGTATCGCCGACGTCAAGGCCTCGAAGCACGATACATTACCGTTGGGGTTCACAGAT AGTGATGTCTTCAGGAGGCTGTCCATTAATGCGGGATTGATCCTGCTGTGGTATTTCTTTTCGCTGTCGATTTCA ATTGTGAGTTTCTCTGGTGCGCGTATTCCATGGCTCACATGCTAACCCCCGTCGGTGCTGGTAGTACAACAAGTG GATGTTCTCCGATGACGATGTTGTCTTTCCTTTCCCCCTCTTCACCACGAGCTTGCATATGGCCGTTCAGTTCAC CTTCTCGTCGATACTCCTCTATTTGATACCCTCCCTGCGTCCGAAAGCGCCCGCTGCATCCACACCTACAGGTTC GCCCGTGAGCGAGCATGATCCCTTTGAGTCCCGACCGGTGGTCACCCGGTTCTTCTACCTTACACGTCTCGTCCC CTGCGGTGTGGCGACTTCCCTCGATATTGGACTGGGAAACATGTCCCTGAAGTTCATTTCCCTTACCTTCCTCAC CATGTGCAAATCATCCGCCTTAGCATTCGTCCTTCTCTTTGCCTTCGTTTTCCGCCTCGAAACCCCATCCGTCAA GTTGATCGTGATCATTGCTACGATGACCGTGGGTGTTGTCATGATGGTCGCCGGCGAGACCGCTTTCAATGCGGT TGGATTTATCCTCGTCATTGCATCGGCGTTCTTTTCGGGCTTCCGATGGGGCCTCACCCAGATTCTCCTCCTACG CCATCCCGCGACGGCGAACCCGTTCTCCACCCTCTTCTTCCTTACGCCTGTGATGTTTGTCTCACTGATTGTCAT TGCGCTGGCGGTAGAGGGGCCGTTGGAGATCATCGCTGGCTTCCAAGCCCTGGCGGCTGCCCGCGGGGGCCTGTT TGCTGTTTTCCTGCTGATCTTCCCTGGTATCCTGGCTTTCTGCATGATTTCCTCTGAGTTTGCGCTCCTCAAGCG CTCTTCGGTAGTGACGCTGAGCATTTGCGGCATCTTCAAGGAAGTCGTCACCATCAGTGCTGCTGGGGTCATCTT CCACGATCAGCTCACTGCAGTCAACATTACGGGCTTGGTGGTCACCATTGGCAGCATCGCGTCCTACAACTACAT GAAGATCTCTAAAATGCGCTCAGAAGCCCAGAAGGGCGCGTGGACACGCAGTCCCAATCTGGACTCTGAGGACGA CTCCGATCCGACTGGGGAGCGCGGAGAGTACCGACGGATCCGTAACCCTGAAACGAGCACTTTCCAATCTCCGGG TATCCATGTCGACGAGGACAATGTGAATATCACTCCTGAGGATGACTTGACCGCTGGCGGTCGGCGCTCATTCCG TGTTCGTGCCAGCGGCGCTAGCAATGCGCTCGGGTTAAGCATCAACACCACCAATCTCGGGGACCACGATAGAAA TTTCTCCCCTCGAGTGTCGGCCCCCTCGCCCTTGAAATCGGCGCCCCCAGTCATCACGTCCCTGGAAGCTGAGCT TAATCGATCGGCTTCTGGCCCTAGCTTCGGAAGCAAGCCCCAGACATCTCCAGAACGGGCTTCACCGGAAGGACG CTCAGCTAGCTAG |