Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g94.t1
Gene name
Locationscaffold_001:310596..311678
Strand+
Gene length (bp)1082
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 1.0E-08 3 84
PF00153 Mito_carr Mitochondrial carrier protein 2.5E-15 98 184
PF00153 Mito_carr Mitochondrial carrier protein 2.7E-20 192 294

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 55 77 22
2 153 175 22
3 190 212 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g94.t1
MSSDFWAGYLSGAIGIIIGNPLDVIKVRLQAGSTPDVAASTTPQQLSRFDSATSLVRGAAAPILGYGALNALLFV
AYNRSLKFLDSSIIDSTNPQGIPLSKIWLAGAAGGVASWTVSSPTEFIKCRAQLDSRPGVSSWTVAKDIVRTRGW
TGLYYGGGVTCARDAIGYGFYFWSYEYCKRLTASNDDDATMTATKVLLCGGIAGIVTWASVFPLDVLKTRLQART
IELSPEHRPLVQPSAKPYTASSIQIAKEAYLNEGLKAFYRGLGVCSVRAFIVNAVQWAAYEWLMKYLQNP*
Coding >Ani_SJS100_1|g94.t1
ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATC
AAAGTGCGGTTGCAGGCAGGAAGTACTCCAGATGTCGCCGCCTCAACCACACCCCAGCAACTGAGTCGCTTTGAT
AGCGCTACTTCTCTTGTTCGAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTG
GCTTATAACCGATCCTTGAAGTTCTTGGATAGTTCAATCATTGACTCTACAAACCCACAAGGTATCCCCTTAAGC
AAGATCTGGCTTGCCGGTGCTGCAGGTGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGT
AGGGCCCAGCTTGACTCACGGCCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGG
ACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTACTTTTGGTCTTAC
GAGTACTGCAAGCGGCTTACTGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGT
GGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGCTCAAGACAAGACTGCAGGCGAGGACG
ATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATT
GCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCCTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTC
ATAGTCAATGCTGTTCAGTGGGCGGCATACGAGTGGCTGATGAAGTATTTACAAAATCCATAA
Transcript >Ani_SJS100_1|g94.t1
ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATC
AAAGTGCGGTTGCAGGCAGGAAGTACTCCAGATGTCGCCGCCTCAACCACACCCCAGCAACTGAGTCGCTTTGAT
AGCGCTACTTCTCTTGTTCGAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTG
GCTTATAACCGATCCTTGAAGTTCTTGGATAGTTCAATCATTGACTCTACAAACCCACAAGGTATCCCCTTAAGC
AAGATCTGGCTTGCCGGTGCTGCAGGTGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGT
AGGGCCCAGCTTGACTCACGGCCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGG
ACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTACTTTTGGTCTTAC
GAGTACTGCAAGCGGCTTACTGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGT
GGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGCTCAAGACAAGACTGCAGGCGAGGACG
ATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATT
GCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCCTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTC
ATAGTCAATGCTGTTCAGTGGGCGGCATACGAGTGGCTGATGAAGTATTTACAAAATCCATAA
Gene >Ani_SJS100_1|g94.t1
ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATC
AAAGTGCGGTTGCAGGCAGGAAGTACTCCAGATGTCGCCGCCTCAACCACACCCCAGCAACTGAGTCGCTTTGAT
AGCGCTACTTCTCTTGTTCGAGGTTTGCAAATCTTCCGATCATGTAAATTACGCGTCTAGTATTAACCATTTCAC
CAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGA
AGTTCTTGGATAGTTCAATCATTGACTCTACAAACCCACAAGGTATCCCCTTAAGCAAGATCTGGCTTGCCGGTG
CTGCAGGTGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCAC
GGCCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGGACGGGCCTTTATTACGGAG
GAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTAGTATGTGAATCCCTCCCCCGGATCGTCCCCCG
CTATTTCATTGCGGCTCTTCACGGAGTATTGACATACATTCTTCTCTGCAGCTTTTGGTCTTACGAGTACTGCAA
GCGGCTTACTGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGG
AATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGCTCAAGACAAGACTGCAGGCGAGGACGATTGAATTGTC
CCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGC
TTATCTCAATGAAGGACTCAAAGCCTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTCATAGTCAATGC
TGTTCAGGTATGTTAATCTGGGCCTGAAATGTTGTACCGCATTGCTAACGACCCATTCCAAGTGGGCGGCATACG
AGTGGCTGATGAAGTATTTACAAAATCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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