Protein ID | Ani_SJS100_1|g94.t1 |
Gene name | |
Location | scaffold_001:310596..311678 |
Strand | + |
Gene length (bp) | 1082 |
Transcript length (bp) | 888 |
Coding sequence length (bp) | 888 |
Protein length (aa) | 296 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00153 | Mito_carr | Mitochondrial carrier protein | 1.0E-08 | 3 | 84 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.5E-15 | 98 | 184 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.7E-20 | 192 | 294 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 55 | 77 | 22 |
2 | 153 | 175 | 22 |
3 | 190 | 212 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g94.t1 MSSDFWAGYLSGAIGIIIGNPLDVIKVRLQAGSTPDVAASTTPQQLSRFDSATSLVRGAAAPILGYGALNALLFV AYNRSLKFLDSSIIDSTNPQGIPLSKIWLAGAAGGVASWTVSSPTEFIKCRAQLDSRPGVSSWTVAKDIVRTRGW TGLYYGGGVTCARDAIGYGFYFWSYEYCKRLTASNDDDATMTATKVLLCGGIAGIVTWASVFPLDVLKTRLQART IELSPEHRPLVQPSAKPYTASSIQIAKEAYLNEGLKAFYRGLGVCSVRAFIVNAVQWAAYEWLMKYLQNP* |
Coding | >Ani_SJS100_1|g94.t1 ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATC AAAGTGCGGTTGCAGGCAGGAAGTACTCCAGATGTCGCCGCCTCAACCACACCCCAGCAACTGAGTCGCTTTGAT AGCGCTACTTCTCTTGTTCGAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTG GCTTATAACCGATCCTTGAAGTTCTTGGATAGTTCAATCATTGACTCTACAAACCCACAAGGTATCCCCTTAAGC AAGATCTGGCTTGCCGGTGCTGCAGGTGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGT AGGGCCCAGCTTGACTCACGGCCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGG ACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTACTTTTGGTCTTAC GAGTACTGCAAGCGGCTTACTGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGT GGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGCTCAAGACAAGACTGCAGGCGAGGACG ATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATT GCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCCTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTC ATAGTCAATGCTGTTCAGTGGGCGGCATACGAGTGGCTGATGAAGTATTTACAAAATCCATAA |
Transcript | >Ani_SJS100_1|g94.t1 ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATC AAAGTGCGGTTGCAGGCAGGAAGTACTCCAGATGTCGCCGCCTCAACCACACCCCAGCAACTGAGTCGCTTTGAT AGCGCTACTTCTCTTGTTCGAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTG GCTTATAACCGATCCTTGAAGTTCTTGGATAGTTCAATCATTGACTCTACAAACCCACAAGGTATCCCCTTAAGC AAGATCTGGCTTGCCGGTGCTGCAGGTGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGT AGGGCCCAGCTTGACTCACGGCCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGG ACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTACTTTTGGTCTTAC GAGTACTGCAAGCGGCTTACTGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGT GGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGCTCAAGACAAGACTGCAGGCGAGGACG ATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATT GCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCCTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTC ATAGTCAATGCTGTTCAGTGGGCGGCATACGAGTGGCTGATGAAGTATTTACAAAATCCATAA |
Gene | >Ani_SJS100_1|g94.t1 ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATC AAAGTGCGGTTGCAGGCAGGAAGTACTCCAGATGTCGCCGCCTCAACCACACCCCAGCAACTGAGTCGCTTTGAT AGCGCTACTTCTCTTGTTCGAGGTTTGCAAATCTTCCGATCATGTAAATTACGCGTCTAGTATTAACCATTTCAC CAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGA AGTTCTTGGATAGTTCAATCATTGACTCTACAAACCCACAAGGTATCCCCTTAAGCAAGATCTGGCTTGCCGGTG CTGCAGGTGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCAC GGCCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGGACGGGCCTTTATTACGGAG GAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTAGTATGTGAATCCCTCCCCCGGATCGTCCCCCG CTATTTCATTGCGGCTCTTCACGGAGTATTGACATACATTCTTCTCTGCAGCTTTTGGTCTTACGAGTACTGCAA GCGGCTTACTGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGG AATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGCTCAAGACAAGACTGCAGGCGAGGACGATTGAATTGTC CCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGC TTATCTCAATGAAGGACTCAAAGCCTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTCATAGTCAATGC TGTTCAGGTATGTTAATCTGGGCCTGAAATGTTGTACCGCATTGCTAACGACCCATTCCAAGTGGGCGGCATACG AGTGGCTGATGAAGTATTTACAAAATCCATAA |