Protein ID | Ani_SJS100_1|g9387.t1 |
Gene name | |
Location | scaffold_085:3854..5603 |
Strand | - |
Gene length (bp) | 1749 |
Transcript length (bp) | 1698 |
Coding sequence length (bp) | 1698 |
Protein length (aa) | 566 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04677 | CwfJ_C_1 | Protein similar to CwfJ C-terminus 1 | 1.0E-24 | 304 | 428 |
PF04676 | CwfJ_C_2 | Protein similar to CwfJ C-terminus 2 | 7.4E-16 | 502 | 563 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 47 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9387.t1 MASKIVVIGDVNCELQDVFTKLSKLHIKQNFSFAIIVGDLFGDCSTEHELEQISALLQGNIVVPLPTYFTLGSSP LPTRIIEAIESKDEVCPNLYFLGRRGTLKTSEGVRLVSLGGTLDPDSKSSEKYHPSYTESDARALYGAHQADILI THQWPKDIRVGSKAPFPDTDTPPTEVQCVADLCSTLKPRYHLSSSSAFFWEREPFFHLPTEDTDNPDAKPLTRFI SLAAYSKTTKTKWMYAFTLDPKAPPALTIPAGTTAPPFAPIPTKRKPLQSQRDSYHRFAVDDDHDNRPRKRRARA PPPGPDQCFFCLSNPNIATHLITSIGDEAYLTTAKGPLPTSKTYPSLKFPSHMLIIPFSHSPTLSSISDPTSRQS TYAEMHRYRSALHSMLRHRANNSLGAVTWEVSRGNGIHIHWQFLPVPADLVRRGLVDAAFKVEAENLKYPRFESQ SQPNDGDESAEPGDFFRVWIWEPPQQAAASDTETGAEAQPENKEEDGNKGSEKTLLLPLSPDFRFDLQFGRRVMA KLMGLEKRINWKDDVQSVQEEEADAVAFKEAFKEWDFTLE* |
Coding | >Ani_SJS100_1|g9387.t1 ATGGCGTCGAAGATAGTCGTCATCGGAGACGTCAACTGCGAACTGCAAGACGTCTTCACCAAGCTCTCCAAGCTG CATATCAAGCAGAACTTCTCCTTCGCCATCATCGTCGGCGACCTATTCGGCGACTGCTCCACAGAGCACGAACTC GAGCAGATCAGCGCTCTGCTCCAAGGCAACATCGTCGTGCCTCTTCCCACCTACTTCACCCTGGGTAGCAGTCCT CTCCCCACGCGCATCATCGAGGCCATCGAATCCAAAGACGAAGTCTGCCCTAATCTCTACTTCCTGGGTCGTCGC GGCACCCTCAAGACCTCCGAAGGCGTGCGTCTCGTCTCCTTAGGAGGCACTCTCGACCCCGACTCCAAATCCTCC GAAAAATACCACCCCTCTTACACCGAATCCGACGCGCGCGCCCTCTACGGCGCCCACCAAGCCGACATCCTTATC ACCCACCAATGGCCCAAGGACATCCGCGTCGGCTCCAAAGCCCCCTTCCCCGACACCGACACCCCCCCAACCGAA GTCCAATGCGTCGCCGACCTCTGCTCAACCCTTAAACCGCGATACCACCTCTCCTCCTCCAGCGCCTTCTTCTGG GAGCGCGAACCCTTCTTCCACCTCCCCACCGAGGACACCGACAACCCCGACGCCAAACCCCTCACCCGCTTCATC AGTCTGGCCGCATACAGCAAAACCACCAAAACCAAATGGATGTACGCCTTCACCCTCGACCCCAAGGCACCGCCA GCCCTCACCATCCCCGCCGGCACAACCGCACCCCCCTTCGCTCCCATCCCCACGAAACGCAAACCCCTCCAATCC CAACGCGACTCCTACCACCGCTTCGCCGTTGACGACGATCACGACAACCGCCCGCGCAAAAGACGCGCTCGCGCG CCCCCTCCAGGCCCAGACCAATGCTTCTTCTGCCTCTCCAACCCCAACATCGCAACCCACCTCATCACCTCCATC GGCGACGAAGCCTACCTCACCACCGCAAAGGGTCCCCTGCCCACCTCCAAAACCTATCCCTCACTCAAGTTTCCC TCCCACATGCTCATAATCCCCTTCTCCCACTCCCCCACTCTCTCCAGCATCTCAGACCCCACATCCAGACAATCC ACCTACGCCGAAATGCACCGCTACCGCTCCGCCCTGCACTCCATGCTGCGCCACCGCGCAAACAATTCCCTGGGC GCAGTAACATGGGAAGTCTCCCGCGGAAACGGAATCCACATTCACTGGCAATTCCTCCCTGTCCCTGCTGATCTC GTGCGCCGGGGCCTCGTCGACGCGGCGTTCAAGGTCGAGGCTGAGAATCTGAAGTATCCAAGATTCGAATCCCAA TCTCAACCTAATGACGGTGATGAGAGCGCGGAACCGGGTGACTTCTTCCGCGTGTGGATTTGGGAGCCTCCGCAG CAGGCTGCTGCTTCAGACACTGAAACTGGAGCTGAGGCTCAGCCTGAGAATAAGGAAGAGGACGGTAACAAAGGA AGTGAGAAAACGCTCCTCCTGCCACTTAGTCCGGACTTCCGGTTCGATTTGCAGTTCGGACGCAGAGTCATGGCC AAGTTGATGGGGTTGGAGAAGCGCATTAATTGGAAGGATGATGTGCAGTCTGTTCAGGAGGAGGAGGCGGATGCG GTGGCGTTTAAGGAAGCTTTTAAGGAGTGGGATTTTACGCTGGAGTAG |
Transcript | >Ani_SJS100_1|g9387.t1 ATGGCGTCGAAGATAGTCGTCATCGGAGACGTCAACTGCGAACTGCAAGACGTCTTCACCAAGCTCTCCAAGCTG CATATCAAGCAGAACTTCTCCTTCGCCATCATCGTCGGCGACCTATTCGGCGACTGCTCCACAGAGCACGAACTC GAGCAGATCAGCGCTCTGCTCCAAGGCAACATCGTCGTGCCTCTTCCCACCTACTTCACCCTGGGTAGCAGTCCT CTCCCCACGCGCATCATCGAGGCCATCGAATCCAAAGACGAAGTCTGCCCTAATCTCTACTTCCTGGGTCGTCGC GGCACCCTCAAGACCTCCGAAGGCGTGCGTCTCGTCTCCTTAGGAGGCACTCTCGACCCCGACTCCAAATCCTCC GAAAAATACCACCCCTCTTACACCGAATCCGACGCGCGCGCCCTCTACGGCGCCCACCAAGCCGACATCCTTATC ACCCACCAATGGCCCAAGGACATCCGCGTCGGCTCCAAAGCCCCCTTCCCCGACACCGACACCCCCCCAACCGAA GTCCAATGCGTCGCCGACCTCTGCTCAACCCTTAAACCGCGATACCACCTCTCCTCCTCCAGCGCCTTCTTCTGG GAGCGCGAACCCTTCTTCCACCTCCCCACCGAGGACACCGACAACCCCGACGCCAAACCCCTCACCCGCTTCATC AGTCTGGCCGCATACAGCAAAACCACCAAAACCAAATGGATGTACGCCTTCACCCTCGACCCCAAGGCACCGCCA GCCCTCACCATCCCCGCCGGCACAACCGCACCCCCCTTCGCTCCCATCCCCACGAAACGCAAACCCCTCCAATCC CAACGCGACTCCTACCACCGCTTCGCCGTTGACGACGATCACGACAACCGCCCGCGCAAAAGACGCGCTCGCGCG CCCCCTCCAGGCCCAGACCAATGCTTCTTCTGCCTCTCCAACCCCAACATCGCAACCCACCTCATCACCTCCATC GGCGACGAAGCCTACCTCACCACCGCAAAGGGTCCCCTGCCCACCTCCAAAACCTATCCCTCACTCAAGTTTCCC TCCCACATGCTCATAATCCCCTTCTCCCACTCCCCCACTCTCTCCAGCATCTCAGACCCCACATCCAGACAATCC ACCTACGCCGAAATGCACCGCTACCGCTCCGCCCTGCACTCCATGCTGCGCCACCGCGCAAACAATTCCCTGGGC GCAGTAACATGGGAAGTCTCCCGCGGAAACGGAATCCACATTCACTGGCAATTCCTCCCTGTCCCTGCTGATCTC GTGCGCCGGGGCCTCGTCGACGCGGCGTTCAAGGTCGAGGCTGAGAATCTGAAGTATCCAAGATTCGAATCCCAA TCTCAACCTAATGACGGTGATGAGAGCGCGGAACCGGGTGACTTCTTCCGCGTGTGGATTTGGGAGCCTCCGCAG CAGGCTGCTGCTTCAGACACTGAAACTGGAGCTGAGGCTCAGCCTGAGAATAAGGAAGAGGACGGTAACAAAGGA AGTGAGAAAACGCTCCTCCTGCCACTTAGTCCGGACTTCCGGTTCGATTTGCAGTTCGGACGCAGAGTCATGGCC AAGTTGATGGGGTTGGAGAAGCGCATTAATTGGAAGGATGATGTGCAGTCTGTTCAGGAGGAGGAGGCGGATGCG GTGGCGTTTAAGGAAGCTTTTAAGGAGTGGGATTTTACGCTGGAGTAG |
Gene | >Ani_SJS100_1|g9387.t1 ATGGCGTCGAAGATGTAAGTCTAGCTCAACTCACTTTTCAAAGTACTTCACTAACTCCTTCCCAGAGTCGTCATC GGAGACGTCAACTGCGAACTGCAAGACGTCTTCACCAAGCTCTCCAAGCTGCATATCAAGCAGAACTTCTCCTTC GCCATCATCGTCGGCGACCTATTCGGCGACTGCTCCACAGAGCACGAACTCGAGCAGATCAGCGCTCTGCTCCAA GGCAACATCGTCGTGCCTCTTCCCACCTACTTCACCCTGGGTAGCAGTCCTCTCCCCACGCGCATCATCGAGGCC ATCGAATCCAAAGACGAAGTCTGCCCTAATCTCTACTTCCTGGGTCGTCGCGGCACCCTCAAGACCTCCGAAGGC GTGCGTCTCGTCTCCTTAGGAGGCACTCTCGACCCCGACTCCAAATCCTCCGAAAAATACCACCCCTCTTACACC GAATCCGACGCGCGCGCCCTCTACGGCGCCCACCAAGCCGACATCCTTATCACCCACCAATGGCCCAAGGACATC CGCGTCGGCTCCAAAGCCCCCTTCCCCGACACCGACACCCCCCCAACCGAAGTCCAATGCGTCGCCGACCTCTGC TCAACCCTTAAACCGCGATACCACCTCTCCTCCTCCAGCGCCTTCTTCTGGGAGCGCGAACCCTTCTTCCACCTC CCCACCGAGGACACCGACAACCCCGACGCCAAACCCCTCACCCGCTTCATCAGTCTGGCCGCATACAGCAAAACC ACCAAAACCAAATGGATGTACGCCTTCACCCTCGACCCCAAGGCACCGCCAGCCCTCACCATCCCCGCCGGCACA ACCGCACCCCCCTTCGCTCCCATCCCCACGAAACGCAAACCCCTCCAATCCCAACGCGACTCCTACCACCGCTTC GCCGTTGACGACGATCACGACAACCGCCCGCGCAAAAGACGCGCTCGCGCGCCCCCTCCAGGCCCAGACCAATGC TTCTTCTGCCTCTCCAACCCCAACATCGCAACCCACCTCATCACCTCCATCGGCGACGAAGCCTACCTCACCACC GCAAAGGGTCCCCTGCCCACCTCCAAAACCTATCCCTCACTCAAGTTTCCCTCCCACATGCTCATAATCCCCTTC TCCCACTCCCCCACTCTCTCCAGCATCTCAGACCCCACATCCAGACAATCCACCTACGCCGAAATGCACCGCTAC CGCTCCGCCCTGCACTCCATGCTGCGCCACCGCGCAAACAATTCCCTGGGCGCAGTAACATGGGAAGTCTCCCGC GGAAACGGAATCCACATTCACTGGCAATTCCTCCCTGTCCCTGCTGATCTCGTGCGCCGGGGCCTCGTCGACGCG GCGTTCAAGGTCGAGGCTGAGAATCTGAAGTATCCAAGATTCGAATCCCAATCTCAACCTAATGACGGTGATGAG AGCGCGGAACCGGGTGACTTCTTCCGCGTGTGGATTTGGGAGCCTCCGCAGCAGGCTGCTGCTTCAGACACTGAA ACTGGAGCTGAGGCTCAGCCTGAGAATAAGGAAGAGGACGGTAACAAAGGAAGTGAGAAAACGCTCCTCCTGCCA CTTAGTCCGGACTTCCGGTTCGATTTGCAGTTCGGACGCAGAGTCATGGCCAAGTTGATGGGGTTGGAGAAGCGC ATTAATTGGAAGGATGATGTGCAGTCTGTTCAGGAGGAGGAGGCGGATGCGGTGGCGTTTAAGGAAGCTTTTAAG GAGTGGGATTTTACGCTGGAGTAG |