Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9309.t1
Gene name
Locationscaffold_083:7925..9159
Strand-
Gene length (bp)1234
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00295 Glyco_hydro_28 Glycosyl hydrolases family 28 9.2E-126 43 360

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004650 polygalacturonase activity Yes
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9309.t1
MHFLQNAVVAATMGAALAAAAPLEKRSCTFTSASAAKSGKSSCSTITLDNIAVPAGETLDLTGLKKGTTVIFEGE
TTFGYKEWKGPLISMSGTDITVKQASGAKINCDGARWWDGKGSNGGKTKPKFFQAHKLDQSSITGLKVYNTPVQG
FSILADHLTITDVTIDNSAGTSKGHNTDAFDIGQSTYITIDGATVYNQDDCLAINSGEHITFTNGYCDGGHGLSI
GSIGGRSDNTVNDVTISNSKVLNSQNGVRIKTIYGKTGTVENVKFEDITLSDISKYGIVVEQDYENGSPTGTPTN
GVKVEDITFKKVTGSVKSSGTDIYILCGSGSCSNWTWSGVDVTGGKKSSKCKNVPSGASCSD*
Coding >Ani_SJS100_1|g9309.t1
ATGCATTTCCTCCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTCCTCTCGAGAAG
CGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAAC
ATCGCGGTCCCCGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTCATCTTCGAGGGTGAG
ACCACCTTCGGCTACAAGGAATGGAAGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCC
TCCGGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTGGCAAGACCAAGCCC
AAGTTCTTCCAGGCCCACAAGCTCGACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGT
TTCAGCATTCTGGCCGACCACCTGACCATCACCGATGTGACCATCGACAACTCCGCCGGTACCAGCAAGGGTCAC
AACACCGATGCCTTTGACATTGGCCAGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAGGATGAC
TGCCTGGCCATCAACTCGGGTGAGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTCTCCATC
GGTTCCATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAG
AACGGTGTCCGCATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATCACCCTG
TCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAAC
GGTGTCAAGGTTGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATCTACATC
CTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAG
TGCAAGAACGTCCCCTCGGGCGCTTCCTGCAGCGATTAA
Transcript >Ani_SJS100_1|g9309.t1
ATGCATTTCCTCCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTCCTCTCGAGAAG
CGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAAC
ATCGCGGTCCCCGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTCATCTTCGAGGGTGAG
ACCACCTTCGGCTACAAGGAATGGAAGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCC
TCCGGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTGGCAAGACCAAGCCC
AAGTTCTTCCAGGCCCACAAGCTCGACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGT
TTCAGCATTCTGGCCGACCACCTGACCATCACCGATGTGACCATCGACAACTCCGCCGGTACCAGCAAGGGTCAC
AACACCGATGCCTTTGACATTGGCCAGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAGGATGAC
TGCCTGGCCATCAACTCGGGTGAGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTCTCCATC
GGTTCCATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAG
AACGGTGTCCGCATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATCACCCTG
TCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAAC
GGTGTCAAGGTTGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATCTACATC
CTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAG
TGCAAGAACGTCCCCTCGGGCGCTTCCTGCAGCGATTAA
Gene >Ani_SJS100_1|g9309.t1
ATGCATTTCCTCCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTCCTCTCGAGAAG
CGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAAC
ATCGCGGTCCCCGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTACGTCTTCTCTAGCTC
CCATAGTACTCTTCCTACTCCGATTGGACCAACTAACTCTCTTCCCTCACAGGTCATCTTCGAGGGTGAGACCAC
CTTCGGCTACAAGGAATGGAAGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCCTCCGG
TGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTGGCAAGACCAAGCCCAAGTT
CTTCCAGGCCCACAAGCTCGACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGTTTCAG
CATTCTGGCCGACCACCTGACCATCACCGATGTGACCATCGACAACTCCGCCGGTACCAGCAAGGGTCACAACAC
CGATGCCTTTGACATTGGCCAGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAGGATGACTGCCT
GGCCATCAACTCGGGTGAGGTATGTATATGTCTTGCCCCATCGCGCTGCCACTGTCCCGTAGCCACACGTGATTA
GAGACTGACTAGAACACAGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTCTCCATCGGTTC
CATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAGAACGG
TGTCCGCATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATCACCCTGTCCGA
CATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAACGGTGT
CAAGGTTGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATCTACATCCTGTG
CGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAA
GAACGTCCCCTCGGGCGCTTCCTGCAGCGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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