Protein ID | Ani_SJS100_1|g93.t1 |
Gene name | |
Location | scaffold_001:307203..310033 |
Strand | - |
Gene length (bp) | 2830 |
Transcript length (bp) | 2472 |
Coding sequence length (bp) | 2472 |
Protein length (aa) | 824 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00176 | SNF2-rel_dom | SNF2-related domain | 6.0E-60 | 236 | 540 |
PF08658 | Rad54_N | Rad54 N terminal | 7.9E-58 | 39 | 209 |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | 1.5E-14 | 585 | 690 |
PF04851 | ResIII | Type III restriction enzyme, res subunit | 6.3E-06 | 229 | 408 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005524 | ATP binding | Yes |
GO:0016787 | hydrolase activity | Yes |
GO:0003677 | DNA binding | Yes |
GO:0016817 | hydrolase activity, acting on acid anhydrides | Yes |
GO:0140658 | ATP-dependent chromatin remodeler activity | Yes |
GO:1901363 | heterocyclic compound binding | No |
GO:0036094 | small molecule binding | No |
GO:0043167 | ion binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0008094 | ATP-dependent activity, acting on DNA | No |
GO:0003674 | molecular_function | No |
GO:0140657 | ATP-dependent activity | No |
GO:0017076 | purine nucleotide binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0000166 | nucleotide binding | No |
GO:0140640 | catalytic activity, acting on a nucleic acid | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0043168 | anion binding | No |
GO:0003824 | catalytic activity | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0005488 | binding | No |
GO:0003676 | nucleic acid binding | No |
GO:0140097 | catalytic activity, acting on DNA | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g93.t1 MSRSQPRVFDRKVLMYRPRPVVNQDGADTPSKPLQASSTNSVDRLSKPFKCPGIATATRTSDKPARKRRKVNYAG ADGTVNDDSVKPYTNEDRLALATRDANRFPSFKVKDKEMTFKQRFKIPLINKSSDAYNSSRPAPTLGMRQGATFV VKPLHDPSGEFAIVLYDPTVDDVNEPEVKEGATADTEEQKPKLDEPLVHKSLADILGLKKKTEGRPKVPVVIDPR LAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPSSL VGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRAIVRPVLIISYETLRLYVDTLRDSPIGLLLC DEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAAGT EEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSAFQLGLYKHFIQSPEIKSLLRGKGSQPL KAIGLLKKLCNHPDLLNLSNDLPGCEYTFPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLIS NYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDW NPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE TRSDTHDTFKCKRCRPDGTQYIKAPAMLYGDTSTWNHFVNDGEQGALSKIQDLLIRQETGERDVSAVFQYISH* |
Coding | >Ani_SJS100_1|g93.t1 ATGAGCCGGAGCCAGCCACGAGTATTTGATAGAAAAGTGCTAATGTACCGGCCACGGCCCGTCGTGAACCAAGAT GGTGCAGACACACCGTCCAAGCCGCTGCAGGCCAGCTCCACGAACAGCGTCGACCGTCTATCGAAACCCTTCAAA TGTCCAGGCATAGCCACGGCTACACGAACATCAGACAAGCCAGCGAGGAAGCGTAGGAAGGTGAACTATGCAGGG GCCGATGGCACGGTGAACGACGACAGCGTCAAGCCATATACCAACGAGGATCGCTTAGCGCTCGCAACAAGAGAT GCGAACAGGTTCCCTAGCTTCAAGGTCAAGGACAAAGAGATGACGTTCAAGCAAAGATTCAAAATTCCTCTGATC AATAAGTCGTCTGACGCCTATAATAGCTCTAGACCAGCGCCCACGCTTGGTATGAGGCAAGGCGCTACATTTGTT GTGAAACCATTGCATGATCCGAGCGGGGAGTTTGCTATAGTGCTATATGACCCAACGGTCGATGACGTTAACGAG CCAGAAGTGAAGGAAGGGGCCACGGCCGATACAGAAGAGCAGAAGCCAAAGTTGGATGAGCCATTGGTACATAAG AGTTTGGCAGATATTCTTGGGCTCAAGAAGAAGACTGAAGGGCGACCGAAAGTTCCGGTTGTTATAGATCCACGG CTGGCGAAAGTGCTACGACCTCACCAGGTTGAGGGTGTCAAGTTCCTTTACCGTTGTACAACTGGCATGGTTGAC AAGAATGCGAATGGTTGCATCATGGCAGATGGGATGGGTCTGGGCAAGACGCTTCAATGTATCTCATTGATGTGG ACGCTCCTCAAGCAATCTCCAGAAGCGGGAGTAACAACCATACAAAAGTGCATTATCGCTTGTCCGTCAAGTTTG GTCGGAAACTGGGCCAATGAACTAGTGAAATGGTTGGGCAAGGACGCCATCACACCTTTTGCGGTCGACGGTAAA GCCTCGAAGACAGAGCTCATCAGTCAGATGAAACAATGGGCCATTGCTTCGGGACGGGCTATTGTCAGACCAGTA CTCATCATATCGTATGAAACACTCCGGTTATATGTTGACACACTGAGGGACAGTCCTATCGGCCTACTTCTTTGT GACGAAGGTCATCGATTGAAGAACAAGGAGAGTTTGACATGGACAGCGCTCAACGGCCTGAATGTACAGCGTCGG GTGATCTTGTCCGGCACTCCCATTCAGAACGACCTTTCAGAATACTTTGCTCTTCTCCATTTTGCTAACCCTAAT TTACTGGGGTCGCAGAACGAGTTCCGGAAAAGGTTCGAATTGCCCATTCTCAGAGGAAGAGATGCCGCAGGAACA GAAGAAGACCTCAAGAAGGGTGATGAGCGTCTTGCCGAACTCTCCGGGATTGTAAACAAGTTTATCATACGACGC ACGAACGATATTCTGTCAAAGTACTTGCCAGTCAAGTACGAACATGTTGTTTTCTGCAACATGTCCGCCTTTCAG CTGGGCTTATATAAGCATTTCATTCAGAGTCCTGAAATCAAAAGCTTACTTCGAGGCAAGGGAAGTCAACCACTG AAAGCAATCGGTCTTTTGAAAAAGCTTTGCAACCATCCGGACCTTCTTAATCTCTCTAATGACCTGCCGGGTTGC GAGTACACCTTCCCAGAGGACTATGTCCCGCCGGAAGCAAGAGGGCGTGATCGAGATATCAAATCTTGGTATTCA GGGAAGATGATGGTCTTGGATCGAATGCTAGCTCGTATTCGCCAGGATACTAATGACAAAATTGTTTTGATTAGC AATTACACCCAGACCCTCGACCTTTTCGAGAAGCTGTGCAGAACCCGGGGGTACGGCTCCTTGCGACTGGACGGA ACCATGACTGTTGGGAAACGACAGAAGCTGGTCGATAAGTTCAATAATCCCGATGGGGAAGAGTTTGTGTTCCTG CTGAGCAGTAAGGCTGGTGGCTGCGGCCTGAATTTAATAGGTGCAAACCGCCTTGTTCTTTTTGACCCCGATTGG AATCCAGCGGCCGATCAGCAGGCTCTGGCGCGGGTGTGGCGTGATGGCCAGAAGAAAGACTGCTTCGTCTACCGT TTCATCGCGACTGGATCAATTGAGGAGAAGATCTTTCAGCGTCAGTCTCATAAACAGTCACTTTCTTCGTGTGTC GTGGATTCGGCCGAGGATGTCGAACGACACTTCTCGCTGGAATCCCTCCGAGAGCTCTTTCAATTCAAACCGGAA ACGCGGAGCGATACACATGACACGTTCAAATGCAAGCGATGCCGACCGGATGGAACACAATACATTAAGGCGCCA GCCATGTTGTACGGTGACACGAGTACTTGGAATCATTTTGTTAATGACGGAGAGCAGGGAGCTCTCAGCAAGATC CAGGACTTGCTGATACGCCAAGAGACTGGAGAGCGTGATGTCTCTGCCGTTTTTCAGTATATCAGCCATTGA |
Transcript | >Ani_SJS100_1|g93.t1 ATGAGCCGGAGCCAGCCACGAGTATTTGATAGAAAAGTGCTAATGTACCGGCCACGGCCCGTCGTGAACCAAGAT GGTGCAGACACACCGTCCAAGCCGCTGCAGGCCAGCTCCACGAACAGCGTCGACCGTCTATCGAAACCCTTCAAA TGTCCAGGCATAGCCACGGCTACACGAACATCAGACAAGCCAGCGAGGAAGCGTAGGAAGGTGAACTATGCAGGG GCCGATGGCACGGTGAACGACGACAGCGTCAAGCCATATACCAACGAGGATCGCTTAGCGCTCGCAACAAGAGAT GCGAACAGGTTCCCTAGCTTCAAGGTCAAGGACAAAGAGATGACGTTCAAGCAAAGATTCAAAATTCCTCTGATC AATAAGTCGTCTGACGCCTATAATAGCTCTAGACCAGCGCCCACGCTTGGTATGAGGCAAGGCGCTACATTTGTT GTGAAACCATTGCATGATCCGAGCGGGGAGTTTGCTATAGTGCTATATGACCCAACGGTCGATGACGTTAACGAG CCAGAAGTGAAGGAAGGGGCCACGGCCGATACAGAAGAGCAGAAGCCAAAGTTGGATGAGCCATTGGTACATAAG AGTTTGGCAGATATTCTTGGGCTCAAGAAGAAGACTGAAGGGCGACCGAAAGTTCCGGTTGTTATAGATCCACGG CTGGCGAAAGTGCTACGACCTCACCAGGTTGAGGGTGTCAAGTTCCTTTACCGTTGTACAACTGGCATGGTTGAC AAGAATGCGAATGGTTGCATCATGGCAGATGGGATGGGTCTGGGCAAGACGCTTCAATGTATCTCATTGATGTGG ACGCTCCTCAAGCAATCTCCAGAAGCGGGAGTAACAACCATACAAAAGTGCATTATCGCTTGTCCGTCAAGTTTG GTCGGAAACTGGGCCAATGAACTAGTGAAATGGTTGGGCAAGGACGCCATCACACCTTTTGCGGTCGACGGTAAA GCCTCGAAGACAGAGCTCATCAGTCAGATGAAACAATGGGCCATTGCTTCGGGACGGGCTATTGTCAGACCAGTA CTCATCATATCGTATGAAACACTCCGGTTATATGTTGACACACTGAGGGACAGTCCTATCGGCCTACTTCTTTGT GACGAAGGTCATCGATTGAAGAACAAGGAGAGTTTGACATGGACAGCGCTCAACGGCCTGAATGTACAGCGTCGG GTGATCTTGTCCGGCACTCCCATTCAGAACGACCTTTCAGAATACTTTGCTCTTCTCCATTTTGCTAACCCTAAT TTACTGGGGTCGCAGAACGAGTTCCGGAAAAGGTTCGAATTGCCCATTCTCAGAGGAAGAGATGCCGCAGGAACA GAAGAAGACCTCAAGAAGGGTGATGAGCGTCTTGCCGAACTCTCCGGGATTGTAAACAAGTTTATCATACGACGC ACGAACGATATTCTGTCAAAGTACTTGCCAGTCAAGTACGAACATGTTGTTTTCTGCAACATGTCCGCCTTTCAG CTGGGCTTATATAAGCATTTCATTCAGAGTCCTGAAATCAAAAGCTTACTTCGAGGCAAGGGAAGTCAACCACTG AAAGCAATCGGTCTTTTGAAAAAGCTTTGCAACCATCCGGACCTTCTTAATCTCTCTAATGACCTGCCGGGTTGC GAGTACACCTTCCCAGAGGACTATGTCCCGCCGGAAGCAAGAGGGCGTGATCGAGATATCAAATCTTGGTATTCA GGGAAGATGATGGTCTTGGATCGAATGCTAGCTCGTATTCGCCAGGATACTAATGACAAAATTGTTTTGATTAGC AATTACACCCAGACCCTCGACCTTTTCGAGAAGCTGTGCAGAACCCGGGGGTACGGCTCCTTGCGACTGGACGGA ACCATGACTGTTGGGAAACGACAGAAGCTGGTCGATAAGTTCAATAATCCCGATGGGGAAGAGTTTGTGTTCCTG CTGAGCAGTAAGGCTGGTGGCTGCGGCCTGAATTTAATAGGTGCAAACCGCCTTGTTCTTTTTGACCCCGATTGG AATCCAGCGGCCGATCAGCAGGCTCTGGCGCGGGTGTGGCGTGATGGCCAGAAGAAAGACTGCTTCGTCTACCGT TTCATCGCGACTGGATCAATTGAGGAGAAGATCTTTCAGCGTCAGTCTCATAAACAGTCACTTTCTTCGTGTGTC GTGGATTCGGCCGAGGATGTCGAACGACACTTCTCGCTGGAATCCCTCCGAGAGCTCTTTCAATTCAAACCGGAA ACGCGGAGCGATACACATGACACGTTCAAATGCAAGCGATGCCGACCGGATGGAACACAATACATTAAGGCGCCA GCCATGTTGTACGGTGACACGAGTACTTGGAATCATTTTGTTAATGACGGAGAGCAGGGAGCTCTCAGCAAGATC CAGGACTTGCTGATACGCCAAGAGACTGGAGAGCGTGATGTCTCTGCCGTTTTTCAGTATATCAGCCATTGA |
Gene | >Ani_SJS100_1|g93.t1 ATGAGCCGGGTAACGTATACTATTGCCATGTGATATCACGTGACAGCGTGATACTTTGGTGTTGCCAACAGATGC GGGCGACGCGCTAGGCAGTGGCAAACACGCGTCGAGTTCGGCCAGCCATTATTGACAACCACAACCGCCGACTAA TACGATCAGAGCCAGCCACGAGTATTTGATAGAAAAGTGCTAATGTGAGATCTATTATGACTTTCTTGAGGTTAC CTTGCACTCTAAGCTTACGCATTCAGGTACCGGCCACGGCCCGTCGTGAACCAAGATGGTGCAGACACACCGTCC AAGCCGCTGCAGGCCAGCTCCACGAACAGCGTCGACCGTCTATCGAAACCCTTCAAATGTCCAGGCATAGCCACG GCTACACGAACATCAGACAAGCCAGCGAGGAAGCGTAGGAAGGTGAACTATGCAGGGGCCGATGGCACGGTGAAC GACGACAGCGTCAAGCCATATACCAACGAGGATCGCTTAGCGCTCGCAACAAGAGATGCGAACAGGTTCCCTAGC TTCAAGGTCAAGGACAAAGAGATGACGTTCAAGCAAAGATTCAAAATTCCTCTGATCAATAAGTCGTCTGACGCC TATAATAGCTCTAGACCAGCGCCCACGCTTGGTATGAGGCAAGGCGCTACATTTGTTGTGAAACCATTGCATGAT CCGAGCGGGGAGTTTGCTATAGTGCTATATGACCCAACGGTCGATGACGTTAACGAGCCAGAAGTGAAGGAAGGG GCCACGGCCGATACAGAAGAGCAGAAGCCAAAGTTGGATGAGCCATTGGTACATAAGAGTTTGGCAGATATTCTT GGGCTCAAGAAGAAGACTGAAGGGCGACCGAAAGTTCCGGTTGTTATAGATCCACGGCTGGCGAAAGTGCTACGA CCTCACCAGGTTGAGGGTGTCAAGGTTAGCATTTGCTCCGCACAAGCTCTGTTGCAATGTACTAATGCGTCGACA AAAGTTCCTTTACCGTTGTACAACTGGCATGGTTGACAAGAATGCGAATGGTTGCATCATGGCAGATGGGATGGG TCTGGGCAAGACGGTAAGCTGAACGGCCTGTGGCACGAAACAAAAGACTAATGGCGCTGGTAGCTTCAATGTATC TCATTGATGTGGACGCTCCTCAAGCAATCTCCAGAAGCGGGAGTAACAACCATACAAAAGTGCATTATCGCTTGT CCGTCAAGTTTGGTCGGAAACTGGGCCAATGAACTAGGTGAGTTGACTTGGCTATTCGATGACACAACTGCTAAC AGTTGCAGTGAAATGGTTGGGCAAGGACGCCATCACACCTTTTGCGGTCGACGGTAAAGCCTCGAAGACAGAGCT CATCAGTCAGATGAAACAATGGGCCATTGCTTCGGGACGGGCTATTGTCAGACCAGTACTCATCATATCGTATGA AACACTCCGGTTATATGTTGACACACTGAGGGACAGTCCTATCGGCCTACTTCTTTGTGACGAAGGTCATCGATT GAAGAACAAGGAGAGTTTGACATGGACAGCGCTCAACGGCCTGAATGTACAGCGTCGGGTGATCTTGTCCGGCAC TCCCATTCAGAACGACCTTTCAGAATACTTTGCTCTTCTCCATTTTGCTAACCCTAATTTACTGGGGTCGCAGAA CGAGTTCCGGAAAAGGTTCGAATTGCCCATTCTCAGAGGAAGAGATGCCGCAGGAACAGAAGAAGACCTCAAGAA GGGTGATGAGCGTCTTGCCGAACTCTCCGGGATTGTAAACAAGTTTATCATACGACGCACGAACGATATTCTGTC AAAGTACTTGCCAGTCAAGTACGAACATGTTGTTTTCTGCAACATGTCCGCCTTTCAGCTGGGCTTATATAAGCA TTTCATTCAGAGTCCTGAAATCAAAAGCTTACTTCGAGGCAAGGGAAGTCAACCACTGAAAGCAATCGGTCTTTT GAAAAAGCTTTGCAACCATCCGGACCTTCTTAATCTCTCTAATGACCTGCCGGGTTGCGAGTACACCTTCCCAGA GGACTATGTCCCGCCGGAAGCAAGAGGGCGTGATCGAGATATCAAATCTTGGTATTCAGGGAAGATGATGGTCTT GGATCGAATGCTAGCTCGTATTCGCCAGGATACTAATGACAAAATTGTTTTGATTAGCAATTACACCCAGACCCT CGACCTTTTCGAGAAGCTGTGCAGAACCCGGGGGTACGGCTCCTTGCGACTGGACGGAACCATGACTGTTGGGAA ACGACAGAAGCTGGTCGATAAGTTCAATAATCCCGATGGGGAAGAGTTTGTGTTCCTGCTGAGCAGTAAGGCTGG TGGCTGCGGCCTGAATTTAATAGGTGCAAACCGCCTTGTTCTTTTTGACCCCGATTGGAATCCAGCGGCCGATCA GCAGGCTCTGGCGCGGGTGTGGCGTGATGGCCAGAAGAAAGACTGCTTCGTCTACCGTTTCATCGCGACTGGATC AATTGAGGAGAAGATCTTTCAGCGTCAGTCTCATAAACAGTCACTTTCTTCGTGTGTCGTGGATTCGGCCGAGGA TGTCGAACGACACTTCTCGCTGGAATCCCTCCGAGAGCTCTTTCAATTCAAACCGGAAACGCGGAGCGATACACA TGACACGTTCAAATGCAAGCGATGCCGACCGGATGGAACACAATACATTAAGGCGCCAGCCATGTTGTACGGTGA CACGAGTACTTGGAATCATTTTGTTAATGACGGAGAGCAGGGAGCTCTCAGCAAGATCCAGGACTTGCTGATACG CCAAGAGACTGGAGAGCGTGATGTCTCTGCCGTTTTTCAGTATATCAGCCATTGA |