Protein ID | Ani_SJS100_1|g9296.t1 |
Gene name | |
Location | scaffold_082:103932..105561 |
Strand | + |
Gene length (bp) | 1629 |
Transcript length (bp) | 1332 |
Coding sequence length (bp) | 1332 |
Protein length (aa) | 444 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05730 | CFEM | CFEM domain | 2.3E-12 | 22 | 87 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 102 | 124 | 22 |
2 | 134 | 156 | 22 |
3 | 206 | 228 | 22 |
4 | 256 | 278 | 22 |
5 | 291 | 310 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9296.t1 MRLQQILIGISVSLAAGASAANSTLPQCAVTCQTQVLAANSTSCATTDTTCLCNDDGFQDDMTTCVTAKCTGREQ LLTKRLNSRQCGIPVHKGRPAVEAATIVPLAISTILFFNRVLAKIMGLGGGWGADDVTIAIAWALAVGIFAVNVK MIELGFGENMWDIDPMDNITLIFKCFQGFVVMYKTQVSLAKISVCLFLLRIFQSTLFRYTTYAVIGLNAAIGITW VLTDSFRCIPVHLAWTQWEGLETGRCVDFIAVTFANAFVNIAVDIIMVLMPVYEVTKLNLSARKKVGVSVMFAMG LVYISSSLLSPPPLTLPRLTAVAIIRVVVFWYNRWNTNLTEQLQPIVHWSVLETQIAVMCACLPTFRAMLVHLFP KVLGNTSDHSSYGKRNTPSGGAVFGSQQPLSKSHINKTVSYSVDYGGKKKPQRSSFVQLVEMDPQAHP* |
Coding | >Ani_SJS100_1|g9296.t1 ATGCGCCTGCAACAGATACTGATTGGGATCTCAGTGTCTCTGGCCGCTGGGGCCTCAGCGGCGAATTCCACTCTA CCTCAATGCGCGGTAACCTGTCAGACGCAAGTTCTAGCGGCCAACTCAACCTCATGCGCAACCACCGATACAACA TGCCTGTGTAACGATGACGGATTTCAGGATGACATGACGACGTGTGTTACTGCAAAGTGTACAGGCAGAGAACAG CTCCTCACCAAACGACTAAATAGCCGACAATGCGGAATTCCTGTTCATAAAGGACGCCCCGCGGTGGAGGCCGCT ACCATTGTTCCGCTAGCCATTTCGACGATTCTCTTCTTTAACCGAGTCCTCGCAAAGATCATGGGTCTTGGGGGT GGTTGGGGCGCAGATGATGTCACAATTGCTATAGCGTGGGCCCTTGCAGTGGGCATCTTTGCCGTCAATGTCAAG ATGATTGAATTGGGTTTTGGCGAAAACATGTGGGATATTGACCCAATGGACAACATCACATTGATATTCAAGTGC TTTCAGGGGTTCGTTGTGATGTATAAAACACAGGTTTCCCTTGCAAAAATTTCAGTGTGTCTGTTCTTGTTGAGG ATCTTTCAGTCAACTTTGTTCCGCTATACCACATATGCAGTCATCGGTTTAAATGCTGCTATTGGAATTACGTGG GTCCTTACCGATTCCTTTCGATGTATTCCCGTCCACTTGGCCTGGACGCAGTGGGAAGGGCTCGAAACCGGGAGA TGCGTCGACTTCATTGCTGTCACTTTCGCCAACGCCTTCGTCAACATCGCCGTCGATATCATCATGGTGCTCATG CCGGTTTACGAAGTGACCAAGCTCAACTTGTCTGCTCGCAAAAAGGTTGGAGTCAGTGTCATGTTCGCCATGGGT CTAGTGTACATATCGTCTTCTCTGCTGTCGCCACCTCCGCTAACCCTTCCCAGATTGACTGCAGTTGCAATCATT CGTGTGGTTGTTTTCTGGTACAACCGTTGGAACACCAACCTCACTGAACAACTACAACCCATCGTTCATTGGTCG GTCCTGGAGACCCAAATCGCGGTCATGTGCGCCTGTCTGCCCACGTTTCGTGCCATGCTCGTGCATCTCTTCCCG AAAGTCCTGGGCAACACCAGCGACCATTCGTCCTATGGCAAACGGAACACGCCTAGCGGAGGGGCTGTGTTCGGG TCCCAGCAACCGTTGAGCAAGAGCCATATTAATAAAACAGTCTCGTACTCCGTCGACTATGGGGGGAAAAAGAAG CCTCAAAGAAGCAGTTTCGTGCAACTAGTGGAAATGGACCCACAGGCTCATCCATAA |
Transcript | >Ani_SJS100_1|g9296.t1 ATGCGCCTGCAACAGATACTGATTGGGATCTCAGTGTCTCTGGCCGCTGGGGCCTCAGCGGCGAATTCCACTCTA CCTCAATGCGCGGTAACCTGTCAGACGCAAGTTCTAGCGGCCAACTCAACCTCATGCGCAACCACCGATACAACA TGCCTGTGTAACGATGACGGATTTCAGGATGACATGACGACGTGTGTTACTGCAAAGTGTACAGGCAGAGAACAG CTCCTCACCAAACGACTAAATAGCCGACAATGCGGAATTCCTGTTCATAAAGGACGCCCCGCGGTGGAGGCCGCT ACCATTGTTCCGCTAGCCATTTCGACGATTCTCTTCTTTAACCGAGTCCTCGCAAAGATCATGGGTCTTGGGGGT GGTTGGGGCGCAGATGATGTCACAATTGCTATAGCGTGGGCCCTTGCAGTGGGCATCTTTGCCGTCAATGTCAAG ATGATTGAATTGGGTTTTGGCGAAAACATGTGGGATATTGACCCAATGGACAACATCACATTGATATTCAAGTGC TTTCAGGGGTTCGTTGTGATGTATAAAACACAGGTTTCCCTTGCAAAAATTTCAGTGTGTCTGTTCTTGTTGAGG ATCTTTCAGTCAACTTTGTTCCGCTATACCACATATGCAGTCATCGGTTTAAATGCTGCTATTGGAATTACGTGG GTCCTTACCGATTCCTTTCGATGTATTCCCGTCCACTTGGCCTGGACGCAGTGGGAAGGGCTCGAAACCGGGAGA TGCGTCGACTTCATTGCTGTCACTTTCGCCAACGCCTTCGTCAACATCGCCGTCGATATCATCATGGTGCTCATG CCGGTTTACGAAGTGACCAAGCTCAACTTGTCTGCTCGCAAAAAGGTTGGAGTCAGTGTCATGTTCGCCATGGGT CTAGTGTACATATCGTCTTCTCTGCTGTCGCCACCTCCGCTAACCCTTCCCAGATTGACTGCAGTTGCAATCATT CGTGTGGTTGTTTTCTGGTACAACCGTTGGAACACCAACCTCACTGAACAACTACAACCCATCGTTCATTGGTCG GTCCTGGAGACCCAAATCGCGGTCATGTGCGCCTGTCTGCCCACGTTTCGTGCCATGCTCGTGCATCTCTTCCCG AAAGTCCTGGGCAACACCAGCGACCATTCGTCCTATGGCAAACGGAACACGCCTAGCGGAGGGGCTGTGTTCGGG TCCCAGCAACCGTTGAGCAAGAGCCATATTAATAAAACAGTCTCGTACTCCGTCGACTATGGGGGGAAAAAGAAG CCTCAAAGAAGCAGTTTCGTGCAACTAGTGGAAATGGACCCACAGGCTCATCCATAA |
Gene | >Ani_SJS100_1|g9296.t1 ATGCGCCTGCAACAGATACTGATTGGGATCTCAGTGTCTCTGGCCGCTGGGGCCTCAGCGGCGAATTCCACTCTA CCTCAATGCGCGGTATGCTCGGATGCCATCGGAACGTCATACCCTCGCTGACCCTTACAATAGGTAACCTGTCAG ACGCAAGTTCTAGCGGCCAACTCAACCTCATGCGCAACCACCGATACAACATGCCTGTGTAACGATGACGGATTT CAGGATGACATGACGACGTGTGTTACTGCAAAGTGTACAGGCAGAGAACAGCTCCGTATGTCTCATCGCAAGCTT CGATCTGCTACCATCTAACAACTTGCAGTCACCAAACGACTAAATAGCCGACAATGCGGAATTCCTGTTCATAAA GGACGCCCCGCGGTGGAGGCCGCTACCATTGTTCCGCTAGCCATTTCGACGATTCTCTTCTTTAACCGAGTCCTC GCAAAGATCATGGGTCTTGGGGGTGGTTGGGGCGCAGATGATGTCACAATTGCTATAGCGTGGGTATGTATAACG TTATACATGCCCCAAATATTTACTAAGAATGAATATAGGCCCTTGCAGTGGGCATCTTTGCCGTCAATGTCAAGA GTAAGTTTGGTTGTATAAAGACTGGGAGACCGTCTAACCATCCTTCAGTGATTGAATTGGGTTTTGGCGAAAACA TGTGGGATATTGACCCAATGGACAACATCACATTGATATTCAAGGTGCGTGTGCAGTCGTCAATGACACGGTTAC ATTCTAATTGTTATCCAGTGCTTTCAGGGGTTCGTTGTGATGTATAAAACACAGGTTTCCCTTGCAAAAATTTCA GTGTGTCTGTTCTTGTTGAGGATCTTTCAGTCAACTTTGTTCCGCTATACCACATATGCAGTCATCGGTTTAAAT GCTGCTATTGGAATTACGTGGGTCCTTACCGATTCCTTTCGATGTATTCCCGTCCACTTGGCCTGGACGCAGTGG GAAGGGCTCGAAACCGGGAGATGCGTCGACTTCATTGCTGTCACTTTCGCCAACGCCTTCGTCAACATCGCCGTC GATATCATCATGGTGCTCATGCCGGTTTACGAAGTGACCAAGCTCAACTTGTCTGCTCGCAAAAAGGTTGGAGTC AGTGTCATGTTCGCCATGGGTCTAGTGTACATATCGTCTTCTCTGCTGTCGCCACCTCCGCTAACCCTTCCCAGA TTGACTGCAGTTGCAATCATTCGTGTGGTTGTTTTCTGGTACAACCGTTGGAACACCAACCTCACTGGTTCGTCC GGCTGCCCGCCCCTGATGAATACCTACTAACCCAGAATCATAGAACAACTACAACCCATCGTTCATTGGTCGGTC CTGGAGACCCAAATCGCGGTCATGTGCGCCTGTCTGCCCACGTTTCGTGCCATGCTCGTGCATCTCTTCCCGAAA GTCCTGGGCAACACCAGCGACCATTCGTCCTATGGCAAACGGAACACGCCTAGCGGAGGGGCTGTGTTCGGGTCC CAGCAACCGTTGAGCAAGAGCCATATTAATAAAACAGTCTCGTACTCCGTCGACTATGGGGGGAAAAAGAAGCCT CAAAGAAGCAGTTTCGTGCAACTAGTGGAAATGGACCCACAGGCTCATCCATAA |