© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g929.t1 |
| Gene name | |
| Location | scaffold_003:344567..346150 |
| Strand | + |
| Gene length (bp) | 1583 |
| Transcript length (bp) | 1515 |
| Coding sequence length (bp) | 1515 |
| Protein length (aa) | 505 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01554 | MatE | MatE | 1.5E-28 | 57 | 218 |
| PF01554 | MatE | MatE | 1.9E-26 | 283 | 433 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0042910 | xenobiotic transmembrane transporter activity | Yes |
| GO:0015297 | antiporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 84 | 106 | 22 |
| 2 | 126 | 148 | 22 |
| 3 | 168 | 185 | 17 |
| 4 | 205 | 227 | 22 |
| 5 | 232 | 254 | 22 |
| 6 | 275 | 297 | 22 |
| 7 | 317 | 339 | 22 |
| 8 | 352 | 374 | 22 |
| 9 | 420 | 442 | 22 |
| 10 | 449 | 471 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g929.t1 MYDSLPSYRETSSAHTHGEEHTPLLPKQVDTGPDSKSAKSSVSFLVEFFRLLKDSIPVILAYTLQNSLQTTSVLI VGRTSPENLATTAFSLMFAMVTAWMIALGGTTALDTLASSTFTGSSNKHDLGILLQRAFFVLGLFYVPVAILWTC SEPVFLLLGQDPQLSRDSARFLTCLIPGGLGYIYFEAMKKYLQAQGIMRPGTYVLLITVPFNALLNYLFCYTFRM GLLGAPFATGISYWLSFALLVLYARFIAGSECWGGWSRKAFENLGTFARLAFLGVVHVGTEWWAFEIVALAAGRL GTIPLAAQSVIMTADQVLNTIPFGVGVATSSRVGSLLGSRDAAGASRAANTAAWLSMALGGAVLAVLMGTRHVFA KIFNSDEGVVQLTAEVLPWVALFQIADGLNGSCGGSLRGMGRQHVGALVNLASYYCGALPLGIWLAFNGWGLKGL WVGQCIALYLVGALEWTIVAFSNWEGEVDKAFQRMDIHDRLEVGHTTNGATTVV* |
| Coding | >Ani_SJS100_1|g929.t1 ATGTACGACTCTCTTCCTAGCTACCGGGAGACTTCTTCCGCGCACACTCATGGAGAGGAACATACGCCACTACTT CCCAAGCAGGTCGACACCGGCCCCGACTCCAAAAGCGCAAAATCATCGGTTTCCTTTCTGGTCGAATTTTTCCGG CTGTTGAAGGACTCCATACCAGTCATTCTGGCATACACGCTGCAAAACAGCCTACAAACCACCTCGGTGTTGATT GTGGGACGGACCTCTCCGGAGAACCTGGCCACCACAGCTTTCTCACTGATGTTTGCCATGGTCACGGCATGGATG ATCGCCTTAGGCGGGACCACCGCATTGGACACACTAGCCTCCTCAACGTTCACAGGCAGCTCGAATAAGCATGAT CTCGGAATTCTGTTGCAGCGGGCATTCTTTGTCCTCGGCCTGTTCTATGTCCCCGTTGCAATTCTTTGGACATGC TCGGAGCCTGTGTTTCTTCTGCTTGGCCAGGACCCCCAGCTTTCACGGGATAGTGCGCGTTTCCTAACTTGCTTG ATCCCTGGCGGTCTGGGTTATATCTACTTCGAGGCCATGAAAAAATATCTGCAAGCACAGGGTATTATGCGCCCT GGGACGTATGTCTTGCTGATTACGGTGCCGTTTAATGCATTGCTCAATTACCTGTTCTGTTACACCTTTCGCATG GGGTTGCTTGGTGCGCCATTTGCCACCGGCATTTCCTACTGGCTGTCCTTTGCACTGCTCGTGTTGTATGCCCGA TTCATTGCCGGCTCCGAATGCTGGGGCGGCTGGTCGCGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCGATTG GCCTTTCTGGGCGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTGAGATAGTAGCTCTTGCAGCCGGAAGGCTG GGAACAATCCCACTGGCGGCTCAGAGCGTCATCATGACCGCAGACCAAGTGCTCAACACAATCCCATTTGGCGTG GGAGTCGCTACATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGTGATGCAGCTGGTGCATCGAGAGCGGCCAAC ACCGCGGCCTGGCTAAGTATGGCGCTGGGAGGGGCCGTGCTGGCTGTGCTGATGGGGACTCGACACGTCTTTGCA AAGATATTCAACTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGGTTCTACCATGGGTGGCGTTGTTCCAGATC GCCGATGGATTGAACGGTAGCTGTGGAGGAAGCCTTAGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGTCAAC CTGGCCAGTTATTATTGTGGTGCACTACCTCTAGGTATTTGGCTAGCCTTCAATGGATGGGGACTGAAAGGTCTT TGGGTGGGACAGTGCATCGCATTGTATCTTGTGGGGGCACTGGAGTGGACAATCGTGGCCTTCAGTAACTGGGAA GGCGAGGTCGATAAGGCGTTTCAGCGAATGGATATCCATGACCGATTGGAGGTTGGACACACCACCAATGGTGCC ACGACTGTTGTGTAA |
| Transcript | >Ani_SJS100_1|g929.t1 ATGTACGACTCTCTTCCTAGCTACCGGGAGACTTCTTCCGCGCACACTCATGGAGAGGAACATACGCCACTACTT CCCAAGCAGGTCGACACCGGCCCCGACTCCAAAAGCGCAAAATCATCGGTTTCCTTTCTGGTCGAATTTTTCCGG CTGTTGAAGGACTCCATACCAGTCATTCTGGCATACACGCTGCAAAACAGCCTACAAACCACCTCGGTGTTGATT GTGGGACGGACCTCTCCGGAGAACCTGGCCACCACAGCTTTCTCACTGATGTTTGCCATGGTCACGGCATGGATG ATCGCCTTAGGCGGGACCACCGCATTGGACACACTAGCCTCCTCAACGTTCACAGGCAGCTCGAATAAGCATGAT CTCGGAATTCTGTTGCAGCGGGCATTCTTTGTCCTCGGCCTGTTCTATGTCCCCGTTGCAATTCTTTGGACATGC TCGGAGCCTGTGTTTCTTCTGCTTGGCCAGGACCCCCAGCTTTCACGGGATAGTGCGCGTTTCCTAACTTGCTTG ATCCCTGGCGGTCTGGGTTATATCTACTTCGAGGCCATGAAAAAATATCTGCAAGCACAGGGTATTATGCGCCCT GGGACGTATGTCTTGCTGATTACGGTGCCGTTTAATGCATTGCTCAATTACCTGTTCTGTTACACCTTTCGCATG GGGTTGCTTGGTGCGCCATTTGCCACCGGCATTTCCTACTGGCTGTCCTTTGCACTGCTCGTGTTGTATGCCCGA TTCATTGCCGGCTCCGAATGCTGGGGCGGCTGGTCGCGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCGATTG GCCTTTCTGGGCGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTGAGATAGTAGCTCTTGCAGCCGGAAGGCTG GGAACAATCCCACTGGCGGCTCAGAGCGTCATCATGACCGCAGACCAAGTGCTCAACACAATCCCATTTGGCGTG GGAGTCGCTACATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGTGATGCAGCTGGTGCATCGAGAGCGGCCAAC ACCGCGGCCTGGCTAAGTATGGCGCTGGGAGGGGCCGTGCTGGCTGTGCTGATGGGGACTCGACACGTCTTTGCA AAGATATTCAACTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGGTTCTACCATGGGTGGCGTTGTTCCAGATC GCCGATGGATTGAACGGTAGCTGTGGAGGAAGCCTTAGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGTCAAC CTGGCCAGTTATTATTGTGGTGCACTACCTCTAGGTATTTGGCTAGCCTTCAATGGATGGGGACTGAAAGGTCTT TGGGTGGGACAGTGCATCGCATTGTATCTTGTGGGGGCACTGGAGTGGACAATCGTGGCCTTCAGTAACTGGGAA GGCGAGGTCGATAAGGCGTTTCAGCGAATGGATATCCATGACCGATTGGAGGTTGGACACACCACCAATGGTGCC ACGACTGTTGTGTAA |
| Gene | >Ani_SJS100_1|g929.t1 ATGTACGACTCTCTTCCTAGCTACCGGGAGACTTCTTCCGCGCACACTCATGGAGAGGAACATACGCCACTACTT CCCAAGCAGGTCGACACCGGCCCCGACTCCAAAAGCGCAAAATCATCGGTTTCCTTTCTGGTCGAATTTTTCCGG CTGTTGAAGGACTCCATACCAGTCATTCTGGCATACACGCTGCAAAACAGCCTACAAACCACCTCGGTGTTGATT GTGGGACGGACCTCTCCGGAGAACCTGGCCACCACAGCTTTCTCACTGATGTTTGCCATGGTCACGGCATGGATG ATCGCCTTAGGCGGGACCACCGCATTGGACACACTAGCCTCCTCAACGTTCACAGGCAGCTCGAATAAGCATGAT CTCGGAATTCTGTTGCAGCGGGCATTCTTTGTCCTCGGCCTGTTCTATGTCCCCGTTGCAATTCTTTGGACATGC TCGGAGCCTGTGTTTCTTCTGCTTGGCCAGGACCCCCAGCTTTCACGGGATAGTGCGCGTTTCCTAACTTGCTTG ATCCCTGGCGGTCTGGGTTATATCTACTTCGAGGCCATGAAAAAATATCTGCAAGCACAGGGTAAGTCTTTTTCC GACGTGCTTCTCAGACATCATATCTCTGGGAAGTTTGTTAATGAGAGGATACAGGTATTATGCGCCCTGGGACGT ATGTCTTGCTGATTACGGTGCCGTTTAATGCATTGCTCAATTACCTGTTCTGTTACACCTTTCGCATGGGGTTGC TTGGTGCGCCATTTGCCACCGGCATTTCCTACTGGCTGTCCTTTGCACTGCTCGTGTTGTATGCCCGATTCATTG CCGGCTCCGAATGCTGGGGCGGCTGGTCGCGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCGATTGGCCTTTC TGGGCGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTGAGATAGTAGCTCTTGCAGCCGGAAGGCTGGGAACAA TCCCACTGGCGGCTCAGAGCGTCATCATGACCGCAGACCAAGTGCTCAACACAATCCCATTTGGCGTGGGAGTCG CTACATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGTGATGCAGCTGGTGCATCGAGAGCGGCCAACACCGCGG CCTGGCTAAGTATGGCGCTGGGAGGGGCCGTGCTGGCTGTGCTGATGGGGACTCGACACGTCTTTGCAAAGATAT TCAACTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGGTTCTACCATGGGTGGCGTTGTTCCAGATCGCCGATG GATTGAACGGTAGCTGTGGAGGAAGCCTTAGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGTCAACCTGGCCA GTTATTATTGTGGTGCACTACCTCTAGGTATTTGGCTAGCCTTCAATGGATGGGGACTGAAAGGTCTTTGGGTGG GACAGTGCATCGCATTGTATCTTGTGGGGGCACTGGAGTGGACAATCGTGGCCTTCAGTAACTGGGAAGGCGAGG TCGATAAGGCGTTTCAGCGAATGGATATCCATGACCGATTGGAGGTTGGACACACCACCAATGGTGCCACGACTG TTGTGTAA |