© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9275.t1 |
| Gene name | |
| Location | scaffold_082:47582..49504 |
| Strand | - |
| Gene length (bp) | 1922 |
| Transcript length (bp) | 1854 |
| Coding sequence length (bp) | 1854 |
| Protein length (aa) | 618 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00230 | MIP | Major intrinsic protein | 2.5E-41 | 336 | 570 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015267 | channel activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 345 | 367 | 22 |
| 2 | 374 | 396 | 22 |
| 3 | 418 | 440 | 22 |
| 4 | 464 | 486 | 22 |
| 5 | 496 | 518 | 22 |
| 6 | 530 | 552 | 22 |
| 7 | 562 | 584 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9275.t1 MDDGETRRPRATSDAISPRGENPPTSPLSPTRGRRGTAGDADFVSPTRRVSGRDGSGAGVRRRSSAASRRSGGSG IPSLAPRTTLAERTQGRFTMAGPEETPQLRLAHEPFVQPGYGDLNPSYEQPANSKPVWGLAKPLPRVVRPGMVPT KEELLEARQNIQLPAENSQKLGLEVDPNDLELGQIEKTADPRKMAAQVEDARIQRENNFMNKILSGDATTTRQGS RLSRTSSSRIRRPSAWDLPPENLSTVPEGETPAPSETHEEPPQMSSEEPLEPVLEEPELRADDGKDGMMDDLPNL EEIEAAYPEDLHPLVQELVEEEVHNNHTTWSVIRTHHREALAESLGVFVQLFVGFCGDLAVTVANAGNPNTTDWV WGFATMMAIYVSGGVSGAHLNPTITIMLWFYRGFPKSKMPEYFAAQFLGAFIAALAAYGLYYHSIQHYLLTNSTT GIITSFVTSQRETWIGPGTAFFTEFLGTMILTVVVLALGDDQNAPPGAGMNSLIVGLMVTCNTMSFAYQTGAALN PSRDFGPRLALLALGYGSSLFTNPYWFYGPWAGSLAGSFLGAFLYDFMIFTGGESPVNYPWERTQRAMRKSRMKW GKRLHLSRRDRGEKTVR* |
| Coding | >Ani_SJS100_1|g9275.t1 ATGGACGACGGGGAGACCAGGCGCCCACGGGCAACGTCTGATGCGATCTCCCCCCGAGGAGAGAACCCTCCCACT TCACCTCTATCACCTACTCGCGGCCGCCGAGGGACTGCTGGTGACGCTGACTTTGTTTCTCCCACCCGCCGCGTC TCTGGCCGTGATGGCTCCGGGGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAAGTGGC ATCCCCAGTTTGGCGCCACGCACCACGCTGGCTGAACGAACCCAAGGTCGTTTCACCATGGCTGGCCCAGAAGAG ACGCCTCAGCTGCGCTTGGCCCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACGAACAG CCCGCCAACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGACCGGGCATGGTGCCGACC AAGGAGGAGCTGTTGGAAGCCCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTC GACCCCAATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATGGCGGCCCAGGTGGAAGAT GCCCGCATCCAGCGTGAGAACAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAGGCTCG CGCCTCTCGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCGCCTGAGAATCTCTCGACG GTGCCCGAAGGCGAGACCCCGGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTG GAGCCCGTCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATGGACGACCTGCCCAATCTG GAGGAGATCGAGGCCGCCTATCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGCACAAC AACCACACCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCCCTGGGGGTCTTCGTGCAG CTGTTCGTCGGCTTTTGCGGCGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCAACACCACCGACTGGGTC TGGGGGTTTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACATCTCAATCCGACCATCACC ATTATGCTATGGTTTTACCGCGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCC TTCATCGCCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTCCTGACCAACTCCACCACG GGCATCATCACCAGCTTTGTGACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCGAATTT CTGGGCACGATGATACTGACGGTGGTGGTCCTGGCGCTGGGTGACGATCAGAACGCACCCCCGGGAGCGGGTATG AACTCACTCATCGTGGGTCTCATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCTTGAAT CCGAGTCGAGACTTTGGGCCCCGATTAGCGTTGCTGGCTCTTGGGTACGGCTCGTCGCTGTTCACCAATCCGTAC TGGTTTTACGGACCATGGGCCGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGATCTTT ACGGGTGGTGAATCGCCGGTCAACTACCCCTGGGAACGGACGCAGCGGGCGATGCGAAAGAGTCGGATGAAGTGG GGGAAGCGGTTGCATCTGTCACGCCGAGACAGGGGAGAGAAGACTGTTCGTTGA |
| Transcript | >Ani_SJS100_1|g9275.t1 ATGGACGACGGGGAGACCAGGCGCCCACGGGCAACGTCTGATGCGATCTCCCCCCGAGGAGAGAACCCTCCCACT TCACCTCTATCACCTACTCGCGGCCGCCGAGGGACTGCTGGTGACGCTGACTTTGTTTCTCCCACCCGCCGCGTC TCTGGCCGTGATGGCTCCGGGGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAAGTGGC ATCCCCAGTTTGGCGCCACGCACCACGCTGGCTGAACGAACCCAAGGTCGTTTCACCATGGCTGGCCCAGAAGAG ACGCCTCAGCTGCGCTTGGCCCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACGAACAG CCCGCCAACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGACCGGGCATGGTGCCGACC AAGGAGGAGCTGTTGGAAGCCCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTC GACCCCAATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATGGCGGCCCAGGTGGAAGAT GCCCGCATCCAGCGTGAGAACAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAGGCTCG CGCCTCTCGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCGCCTGAGAATCTCTCGACG GTGCCCGAAGGCGAGACCCCGGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTG GAGCCCGTCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATGGACGACCTGCCCAATCTG GAGGAGATCGAGGCCGCCTATCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGCACAAC AACCACACCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCCCTGGGGGTCTTCGTGCAG CTGTTCGTCGGCTTTTGCGGCGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCAACACCACCGACTGGGTC TGGGGGTTTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACATCTCAATCCGACCATCACC ATTATGCTATGGTTTTACCGCGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCC TTCATCGCCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTCCTGACCAACTCCACCACG GGCATCATCACCAGCTTTGTGACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCGAATTT CTGGGCACGATGATACTGACGGTGGTGGTCCTGGCGCTGGGTGACGATCAGAACGCACCCCCGGGAGCGGGTATG AACTCACTCATCGTGGGTCTCATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCTTGAAT CCGAGTCGAGACTTTGGGCCCCGATTAGCGTTGCTGGCTCTTGGGTACGGCTCGTCGCTGTTCACCAATCCGTAC TGGTTTTACGGACCATGGGCCGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGATCTTT ACGGGTGGTGAATCGCCGGTCAACTACCCCTGGGAACGGACGCAGCGGGCGATGCGAAAGAGTCGGATGAAGTGG GGGAAGCGGTTGCATCTGTCACGCCGAGACAGGGGAGAGAAGACTGTTCGTTGA |
| Gene | >Ani_SJS100_1|g9275.t1 ATGGACGACGGGGAGACCAGGCGCCCACGGGCAACGGTATGTTCACTCGTATTCTCCTTCAGCTGAGCCAGGAGC TGATCGGAGTAATCTCCTCGCTTGAGCAGTCTGATGCGATCTCCCCCCGAGGAGAGAACCCTCCCACTTCACCTC TATCACCTACTCGCGGCCGCCGAGGGACTGCTGGTGACGCTGACTTTGTTTCTCCCACCCGCCGCGTCTCTGGCC GTGATGGCTCCGGGGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAAGTGGCATCCCCA GTTTGGCGCCACGCACCACGCTGGCTGAACGAACCCAAGGTCGTTTCACCATGGCTGGCCCAGAAGAGACGCCTC AGCTGCGCTTGGCCCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACGAACAGCCCGCCA ACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGACCGGGCATGGTGCCGACCAAGGAGG AGCTGTTGGAAGCCCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTCGACCCCA ATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATGGCGGCCCAGGTGGAAGATGCCCGCA TCCAGCGTGAGAACAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAGGCTCGCGCCTCT CGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCGCCTGAGAATCTCTCGACGGTGCCCG AAGGCGAGACCCCGGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTGGAGCCCG TCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATGGACGACCTGCCCAATCTGGAGGAGA TCGAGGCCGCCTATCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGCACAACAACCACA CCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCCCTGGGGGTCTTCGTGCAGCTGTTCG TCGGCTTTTGCGGCGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCAACACCACCGACTGGGTCTGGGGGT TTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACATCTCAATCCGACCATCACCATTATGC TATGGTTTTACCGCGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCCTTCATCG CCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTCCTGACCAACTCCACCACGGGCATCA TCACCAGCTTTGTGACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCGAATTTCTGGGCA CGATGATACTGACGGTGGTGGTCCTGGCGCTGGGTGACGATCAGAACGCACCCCCGGGAGCGGGTATGAACTCAC TCATCGTGGGTCTCATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCTTGAATCCGAGTC GAGACTTTGGGCCCCGATTAGCGTTGCTGGCTCTTGGGTACGGCTCGTCGCTGTTCACCAATCCGTACTGGTTTT ACGGACCATGGGCCGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGATCTTTACGGGTG GTGAATCGCCGGTCAACTACCCCTGGGAACGGACGCAGCGGGCGATGCGAAAGAGTCGGATGAAGTGGGGGAAGC GGTTGCATCTGTCACGCCGAGACAGGGGAGAGAAGACTGTTCGTTGA |