© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9269.t1 |
| Gene name | |
| Location | scaffold_082:33365..35159 |
| Strand | + |
| Gene length (bp) | 1794 |
| Transcript length (bp) | 1368 |
| Coding sequence length (bp) | 1368 |
| Protein length (aa) | 456 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 4.3E-39 | 51 | 435 |
| PF03222 | Trp_Tyr_perm | Tryptophan/tyrosine permease family | 3.6E-06 | 53 | 192 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003333 | amino acid transmembrane transport | Yes |
| GO:0071705 | nitrogen compound transport | No |
| GO:0071702 | organic substance transport | No |
| GO:0008150 | biological_process | No |
| GO:0015849 | organic acid transport | No |
| GO:0055085 | transmembrane transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0006865 | amino acid transport | No |
| GO:0051179 | localization | No |
| GO:1903825 | organic acid transmembrane transport | No |
| GO:0009987 | cellular process | No |
| GO:1905039 | carboxylic acid transmembrane transport | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 80 | 102 | 22 |
| 2 | 137 | 159 | 22 |
| 3 | 163 | 182 | 19 |
| 4 | 189 | 211 | 22 |
| 5 | 231 | 253 | 22 |
| 6 | 265 | 287 | 22 |
| 7 | 310 | 332 | 22 |
| 8 | 345 | 367 | 22 |
| 9 | 377 | 399 | 22 |
| 10 | 419 | 441 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9269.t1 MSTLDVKDIENGPARRVEEEGGMWENDMEKTPSVERDPFGNEAVGEVHYKTLDWWQSGMLMIAETVSLGVLSLPA TVAEVGLIPAIILIVGMGIIATYSGYVIGQFRARYPFIHSMADAGEVLCGRYGRMFTEFAQLVFFMFASGSHLVT FTVMMNTLTNHGTCSVVFGVVGLVLSFACSLPRTMKNVSWLAVTSFLSIFTAVLITMIGVAVEHPNPPPMQLTRS TSFVKGFSAVTNIAFAYCGHPAFFGFIAEMKEPKDFPKSLCMLQGFEIVFYTVASAVIYRYAGQNVTSPALGSAG IVVRKVAYGIAIPTIVIAGVVLGHVAIKNVYVRLFRGTDVMHKRSALGIGAWIGLAAGYWIIAWVIAEAIPVFSD LVSLVSALFASWFSFGLPGVFWLYMYWGNYFTSVRKTLLTLANLALFGIGATICVCGLWVSGLSISSDSSGSSFS CANNA* |
| Coding | >Ani_SJS100_1|g9269.t1 ATGTCGACCTTGGACGTGAAGGATATTGAGAATGGACCGGCTCGCCGGGTCGAGGAAGAGGGGGGCATGTGGGAG AATGATATGGAGAAGACGCCATCCGTGGAGAGGGATCCTTTTGGAAATGAAGCTGTGGGAGAGGTTCACTATAAG ACTCTCGACTGGTGGCAATCTGGCATGCTGATGATCGCCGAGACTGTATCCCTGGGTGTTCTGTCTCTGCCCGCC ACCGTGGCTGAGGTTGGCCTGATTCCTGCCATCATCCTTATCGTGGGCATGGGCATCATTGCCACCTACTCCGGC TACGTCATTGGACAGTTCCGGGCCAGATACCCCTTCATCCACAGCATGGCGGATGCCGGCGAGGTCTTGTGCGGC CGCTACGGTCGCATGTTCACGGAATTTGCTCAGCTGGTGTTCTTCATGTTTGCATCTGGCAGTCACTTGGTGACC TTCACCGTTATGATGAACACCCTTACCAACCACGGAACCTGCTCTGTCGTGTTTGGTGTCGTCGGCTTGGTGCTT TCCTTCGCCTGCTCTCTTCCTCGTACCATGAAGAACGTCTCATGGCTGGCTGTCACTTCCTTCCTCAGTATTTTC ACGGCCGTCTTGATCACCATGATTGGTGTCGCCGTTGAACATCCGAACCCTCCGCCCATGCAGCTTACCCGCTCA ACTTCTTTCGTCAAGGGTTTCTCGGCTGTCACTAACATCGCTTTCGCCTACTGTGGTCACCCGGCCTTCTTTGGT TTCATCGCCGAGATGAAGGAGCCCAAGGATTTCCCCAAGTCCCTCTGCATGTTGCAAGGTTTCGAAATCGTCTTC TATACGGTCGCCTCCGCCGTCATCTACCGCTACGCCGGTCAGAACGTCACCTCCCCCGCCCTGGGCTCTGCCGGT ATCGTCGTTCGCAAGGTCGCCTACGGCATTGCCATCCCCACCATCGTCATCGCGGGTGTCGTTCTGGGACACGTG GCTATCAAGAACGTCTATGTCCGTCTCTTCCGCGGCACGGATGTCATGCACAAGCGCAGTGCCCTGGGTATCGGT GCCTGGATTGGGCTCGCTGCGGGCTACTGGATTATTGCCTGGGTGATTGCCGAGGCCATTCCAGTCTTTAGCGAT CTCGTCAGCTTGGTCAGCGCATTGTTTGCCAGTTGGTTTTCATTCGGTCTGCCCGGTGTTTTCTGGCTGTACATG TACTGGGGCAACTACTTCACCTCGGTTCGCAAAACGCTCCTTACTCTTGCCAACCTGGCGTTGTTCGGCATTGGC GCTACCATCTGTGTCTGTGGTCTGTGGGTCTCTGGCCTCTCGATCTCTAGTGACAGTTCTGGCAGCAGCTTTTCG TGCGCCAATAATGCCTAA |
| Transcript | >Ani_SJS100_1|g9269.t1 ATGTCGACCTTGGACGTGAAGGATATTGAGAATGGACCGGCTCGCCGGGTCGAGGAAGAGGGGGGCATGTGGGAG AATGATATGGAGAAGACGCCATCCGTGGAGAGGGATCCTTTTGGAAATGAAGCTGTGGGAGAGGTTCACTATAAG ACTCTCGACTGGTGGCAATCTGGCATGCTGATGATCGCCGAGACTGTATCCCTGGGTGTTCTGTCTCTGCCCGCC ACCGTGGCTGAGGTTGGCCTGATTCCTGCCATCATCCTTATCGTGGGCATGGGCATCATTGCCACCTACTCCGGC TACGTCATTGGACAGTTCCGGGCCAGATACCCCTTCATCCACAGCATGGCGGATGCCGGCGAGGTCTTGTGCGGC CGCTACGGTCGCATGTTCACGGAATTTGCTCAGCTGGTGTTCTTCATGTTTGCATCTGGCAGTCACTTGGTGACC TTCACCGTTATGATGAACACCCTTACCAACCACGGAACCTGCTCTGTCGTGTTTGGTGTCGTCGGCTTGGTGCTT TCCTTCGCCTGCTCTCTTCCTCGTACCATGAAGAACGTCTCATGGCTGGCTGTCACTTCCTTCCTCAGTATTTTC ACGGCCGTCTTGATCACCATGATTGGTGTCGCCGTTGAACATCCGAACCCTCCGCCCATGCAGCTTACCCGCTCA ACTTCTTTCGTCAAGGGTTTCTCGGCTGTCACTAACATCGCTTTCGCCTACTGTGGTCACCCGGCCTTCTTTGGT TTCATCGCCGAGATGAAGGAGCCCAAGGATTTCCCCAAGTCCCTCTGCATGTTGCAAGGTTTCGAAATCGTCTTC TATACGGTCGCCTCCGCCGTCATCTACCGCTACGCCGGTCAGAACGTCACCTCCCCCGCCCTGGGCTCTGCCGGT ATCGTCGTTCGCAAGGTCGCCTACGGCATTGCCATCCCCACCATCGTCATCGCGGGTGTCGTTCTGGGACACGTG GCTATCAAGAACGTCTATGTCCGTCTCTTCCGCGGCACGGATGTCATGCACAAGCGCAGTGCCCTGGGTATCGGT GCCTGGATTGGGCTCGCTGCGGGCTACTGGATTATTGCCTGGGTGATTGCCGAGGCCATTCCAGTCTTTAGCGAT CTCGTCAGCTTGGTCAGCGCATTGTTTGCCAGTTGGTTTTCATTCGGTCTGCCCGGTGTTTTCTGGCTGTACATG TACTGGGGCAACTACTTCACCTCGGTTCGCAAAACGCTCCTTACTCTTGCCAACCTGGCGTTGTTCGGCATTGGC GCTACCATCTGTGTCTGTGGTCTGTGGGTCTCTGGCCTCTCGATCTCTAGTGACAGTTCTGGCAGCAGCTTTTCG TGCGCCAATAATGCCTAA |
| Gene | >Ani_SJS100_1|g9269.t1 ATGTCGACCTTGGACGTGAAGGATATTGAGAATGGACCGGCTCGCCGGGTCGAGGAAGAGGGGGGCATGTGGGAG AATGATATGGAGAAGACGCCATCCGTGGAGAGGGATCCTTTTGGAAATGAAGCTGTGGGAGAGGTTCACTATAAG ACTCTCGACTGGTGGTATGTTTGAGCCCCGTGAACTATACCCGACCGTTGATACTAGGCGGCATATACTTGATGG CAGAGACTAACCAACTATTCTTTCTCTTTATAGGCAATCTGGCATGCGTATGCTCTCCCCCACTTTGATATCAAT ATTGTCTCTTTGTGCATGTAACCTAACATCCTTTCTCTCCAGTGATGATCGCCGAGACTGTATCCCTGGGTGTTC TGTCTCTGCCCGCCACCGTGGCTGAGGTTGGCCTGATTCCGTAAGTAGCATACGATCGCGTGCCTTCAACGTCGC CCGCCCAGTCTGTCGCTAACCAGTAATGCAATCAGTGCCATCATCCTTATCGTGGGCATGGGCATCATTGCCACC TACTCCGGCTACGTCATTGGACAGTTCCGGGCCAGATACCCCTTCATCCACAGCATGGCGGATGCCGGCGAGGTC TTGTGCGGCCGCTACGGTCGCATGTTCACGGAATTTGCTCAGCTGGTGTTCTTCATGTTTGCATCTGGCAGTCAC TTGGTGACCTTCACCGTTATGATGAACACCCTTACCAACCACGGAACCTGCTCTGTCGTGTTTGGTGTCGTCGGC TTGGTGCTTTCCTTCGCCTGCTCTCTTCCTCGTACCATGAAGAACGTCTCATGGCTGGCTGTCACTTGTCAGTAT CTCATTGAGTTCATCCCCAGTTTCCTCATATCGTGCTAACACTTTCACACAGCCTTCCTCAGTATTTTCACGGCC GTCTTGATCACCATGATTGGTGTCGCCGTTGAACATCCGAACCCTCCGCCCATGCAGCTTACCCGCTCAACTTCT TTCGTCAAGGGTTTCTCGGCTGTCACTAACATCGCTTTCGCCTACTGTTCGTCTCCCCTTCTCTTGTCCACTGTC ATCCGGTTGCATCTGAGTAACTAACCCTTTCTCCAGGTGGTCACCCGGCCTTCTTTGGTTTCATCGCCGAGATGA AGGAGCCCAAGGATTTCCCCAAGTCCCTCTGCATGTTGCAAGGTTTCGAAATCGTCTTCTATACGGTCGCCTCCG CCGTCATCTACCGCTACGCCGGTCAGAACGTCACCTCCCCCGCCCTGGGCTCTGCCGGTATCGTCGTTCGCAAGG TCGCCTACGGCATTGCCATCCCCACCATCGTCATCGCGGGTGTCGTTCTGGGACACGTGGCTATCAAGAACGTCT ATGTCCGTCTCTTCCGCGGCACGGATGTCATGCACAAGCGCAGTGCCCTGGGTATCGGTGCCTGGATTGGGCTCG CTGCGGGCTACTGGATTATTGCCTGGGTGATTGCCGAGGCCATTCCAGTCTTTAGCGATCTCGTCAGCTTGGTCA GCGCATTGTTTGCCAGTTGGTTTTCATGTGAGTTACCCATACAGTCTGAATTCTCCTACTTCGTCATTGAACTCT GTCACTAATAATTTTCTAGTCGGTCTGCCCGGTGTTTTCTGGCTGTACATGTACTGGGGCAACTACTTCACCTCG GTTCGCAAAACGCTCCTTACTCTTGCCAACCTGGCGTTGTTCGGCATTGGCGCTACCATCTGTGTCTGTGGTCTG TGGGTCTCTGGCCTCTCGATCTCTAGTGACAGTTCTGGCAGCAGCTTTTCGTGCGCCAATAATGCCTAA |