Protein ID | Ani_SJS100_1|g9238.t1 |
Gene name | |
Location | scaffold_081:92763..93465 |
Strand | - |
Gene length (bp) | 702 |
Transcript length (bp) | 702 |
Coding sequence length (bp) | 702 |
Protein length (aa) | 234 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13419 | HAD_2 | Haloacid dehalogenase-like hydrolase | 7.5E-25 | 6 | 199 |
PF00702 | Hydrolase | haloacid dehalogenase-like hydrolase | 2.8E-10 | 4 | 194 |
PF13242 | Hydrolase_like | HAD-hyrolase-like | 9.4E-11 | 148 | 224 |
PF12710 | HAD | haloacid dehalogenase-like hydrolase | 4.8E-08 | 6 | 191 |
Orthofinder run ID | 3 |
Orthogroup | 9378 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9238.t1 MPYQLVIFDFDGTLFDTYDAIEYSIQLTFQRLLPSHPPPSSSDIRPLVSTGAPPGDTFRSLHPDPTTFDESLWVP TYRELYAIHGQSRTTPYPAARDVLQALHDRNQPMAIISNKAAVAVKAALEKTDLLQYFPDSLILGHGVAGVQRKP DPSSFTDVLWPNWKALGAPDGVDAERVLMVGDTLTDILYARNIGAQVCWCRYGQGDVEECERLQPDHTAETLEDV LKIVESRS* |
Coding | >Ani_SJS100_1|g9238.t1 ATGCCATATCAGCTCGTCATTTTTGACTTTGACGGCACCCTGTTCGACACTTACGATGCCATCGAGTACTCCATC CAGTTGACCTTCCAGCGCCTCCTGCCCTCCCATCCTCCGCCTTCGTCCAGCGATATTCGCCCGCTTGTCTCCACC GGTGCGCCTCCCGGGGACACCTTTCGCAGTCTACACCCCGATCCCACCACCTTCGACGAATCCCTTTGGGTCCCC ACCTACCGCGAGCTGTATGCCATCCATGGCCAATCCCGTACAACTCCCTATCCCGCCGCTCGCGACGTCCTACAA GCCTTGCACGACCGGAATCAACCCATGGCCATCATTAGCAACAAAGCTGCGGTGGCAGTGAAGGCGGCCTTAGAG AAGACCGACCTGCTGCAGTACTTTCCAGACTCCCTCATTCTGGGTCATGGGGTGGCCGGCGTGCAGCGCAAGCCT GATCCGTCCAGCTTCACGGACGTGCTCTGGCCGAACTGGAAGGCCCTCGGGGCGCCCGATGGGGTGGATGCGGAG CGCGTGCTGATGGTCGGGGACACCTTGACGGATATTCTGTACGCAAGGAACATTGGCGCCCAGGTCTGCTGGTGT CGGTACGGCCAGGGTGATGTGGAGGAGTGCGAACGGCTGCAACCGGATCATACAGCGGAGACATTAGAGGATGTG CTCAAGATCGTGGAGAGCAGGTCATGA |
Transcript | >Ani_SJS100_1|g9238.t1 ATGCCATATCAGCTCGTCATTTTTGACTTTGACGGCACCCTGTTCGACACTTACGATGCCATCGAGTACTCCATC CAGTTGACCTTCCAGCGCCTCCTGCCCTCCCATCCTCCGCCTTCGTCCAGCGATATTCGCCCGCTTGTCTCCACC GGTGCGCCTCCCGGGGACACCTTTCGCAGTCTACACCCCGATCCCACCACCTTCGACGAATCCCTTTGGGTCCCC ACCTACCGCGAGCTGTATGCCATCCATGGCCAATCCCGTACAACTCCCTATCCCGCCGCTCGCGACGTCCTACAA GCCTTGCACGACCGGAATCAACCCATGGCCATCATTAGCAACAAAGCTGCGGTGGCAGTGAAGGCGGCCTTAGAG AAGACCGACCTGCTGCAGTACTTTCCAGACTCCCTCATTCTGGGTCATGGGGTGGCCGGCGTGCAGCGCAAGCCT GATCCGTCCAGCTTCACGGACGTGCTCTGGCCGAACTGGAAGGCCCTCGGGGCGCCCGATGGGGTGGATGCGGAG CGCGTGCTGATGGTCGGGGACACCTTGACGGATATTCTGTACGCAAGGAACATTGGCGCCCAGGTCTGCTGGTGT CGGTACGGCCAGGGTGATGTGGAGGAGTGCGAACGGCTGCAACCGGATCATACAGCGGAGACATTAGAGGATGTG CTCAAGATCGTGGAGAGCAGGTCATGA |
Gene | >Ani_SJS100_1|g9238.t1 ATGCCATATCAGCTCGTCATTTTTGACTTTGACGGCACCCTGTTCGACACTTACGATGCCATCGAGTACTCCATC CAGTTGACCTTCCAGCGCCTCCTGCCCTCCCATCCTCCGCCTTCGTCCAGCGATATTCGCCCGCTTGTCTCCACC GGTGCGCCTCCCGGGGACACCTTTCGCAGTCTACACCCCGATCCCACCACCTTCGACGAATCCCTTTGGGTCCCC ACCTACCGCGAGCTGTATGCCATCCATGGCCAATCCCGTACAACTCCCTATCCCGCCGCTCGCGACGTCCTACAA GCCTTGCACGACCGGAATCAACCCATGGCCATCATTAGCAACAAAGCTGCGGTGGCAGTGAAGGCGGCCTTAGAG AAGACCGACCTGCTGCAGTACTTTCCAGACTCCCTCATTCTGGGTCATGGGGTGGCCGGCGTGCAGCGCAAGCCT GATCCGTCCAGCTTCACGGACGTGCTCTGGCCGAACTGGAAGGCCCTCGGGGCGCCCGATGGGGTGGATGCGGAG CGCGTGCTGATGGTCGGGGACACCTTGACGGATATTCTGTACGCAAGGAACATTGGCGCCCAGGTCTGCTGGTGT CGGTACGGCCAGGGTGATGTGGAGGAGTGCGAACGGCTGCAACCGGATCATACAGCGGAGACATTAGAGGATGTG CTCAAGATCGTGGAGAGCAGGTCATGA |