Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9234.t1
Gene name
Locationscaffold_081:85009..86554
Strand+
Gene length (bp)1545
Transcript length (bp)1380
Coding sequence length (bp)1380
Protein length (aa) 460

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 7.2E-12 102 241

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

Domain # Start End Length
1 108 130 22

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9234.t1
MKLSHPVEDDFVFVNISRPDEIKSASTQRTIRRHVMRDIGRSRRTRPEQRTWSVGLRAPSDPVTEHIPAPIDPCN
TTFYPTPMSDRALQLMHFMTTDRDYVFRPFRTVWFSMALTDATAILVALANAAMFLDQRLRAQGYQYETSTECLS
YYGQCVRQVTHRLADTRESISQGVITAILGLTCHDLYVGTLDRWKIHISGLGRILHLRGGYRGLDDSITRFAIWL
DVVGSVMEDSRPRLPTPPGYAARIPDMLSPTLRSLLRDLIARYDCFRDVAAAFSYASFIVQYTDGSLCRSETAWV
NEDNLTVIELFGPATHFLLSMSRPTELDPIATENPILYLREALRLVLLLFLATMKQDIFLFTAHERQYLQWKLST
LIPQMERTDYDDSCLKLHLWVLVTVSRLSHSTQPGLYLDDIRSLLDLLGMGSKEGTDLVENILSINILDAYHPFL
PVLKTSSCS*
Coding >Ani_SJS100_1|g9234.t1
ATGAAGCTGTCTCACCCGGTAGAGGACGATTTCGTCTTCGTAAATATCTCGCGCCCCGATGAGATCAAGTCTGCT
TCAACGCAGCGCACCATCCGACGCCATGTCATGCGTGACATTGGGAGATCACGTCGTACACGCCCGGAGCAACGA
ACTTGGTCTGTGGGCCTGAGAGCCCCGTCAGATCCAGTGACAGAACACATTCCAGCGCCGATTGACCCATGTAAT
ACGACATTTTATCCTACCCCTATGAGCGACCGAGCGCTACAGCTCATGCACTTCATGACTACGGACCGCGACTAC
GTGTTCCGTCCGTTCCGGACCGTCTGGTTCTCCATGGCATTAACTGACGCCACTGCCATCCTGGTGGCCTTGGCT
AATGCTGCCATGTTTCTCGATCAACGCCTGCGGGCCCAGGGTTATCAGTATGAGACCAGTACGGAGTGTCTGAGT
TACTACGGACAATGCGTTCGGCAGGTCACACACCGGCTGGCAGATACCCGTGAGAGTATTAGCCAAGGGGTCATC
ACGGCCATATTGGGCCTGACCTGTCACGATCTCTATGTTGGTACGTTAGATCGCTGGAAAATTCATATCAGTGGC
CTGGGCCGTATCCTCCACCTGAGGGGTGGATACCGGGGCCTAGACGATAGTATCACGCGCTTTGCCATTTGGCTT
GATGTTGTGGGCAGCGTGATGGAAGACTCTCGCCCTCGGTTGCCTACTCCGCCGGGGTATGCGGCTCGAATTCCC
GATATGCTGTCTCCCACTCTGAGAAGCCTTCTAAGGGACCTTATTGCAAGATACGATTGCTTCCGTGACGTCGCG
GCTGCCTTCAGTTATGCGAGCTTCATTGTCCAATACACTGACGGGTCCCTTTGTCGTTCCGAAACAGCCTGGGTA
AACGAGGATAACCTCACTGTCATTGAACTGTTTGGCCCAGCCACACATTTCCTGCTTTCCATGTCGAGGCCAACC
GAGTTGGATCCAATTGCAACAGAAAACCCAATTCTGTACCTCCGCGAAGCACTTCGGCTGGTGCTATTACTGTTT
CTTGCCACGATGAAGCAAGATATCTTCCTCTTTACCGCTCACGAACGCCAATATCTGCAGTGGAAGTTATCAACG
CTTATTCCACAGATGGAGAGAACCGACTACGACGACTCTTGTCTGAAACTGCATCTCTGGGTTCTTGTAACAGTG
TCTCGACTTTCTCATTCTACCCAGCCAGGGTTGTATCTTGACGATATCCGGTCCTTGCTGGACCTTCTCGGCATG
GGTAGCAAGGAAGGAACTGATCTTGTCGAAAACATCCTGTCCATTAACATTCTGGATGCCTATCATCCTTTTCTC
CCAGTGCTCAAGACATCCTCATGTTCATAG
Transcript >Ani_SJS100_1|g9234.t1
ATGAAGCTGTCTCACCCGGTAGAGGACGATTTCGTCTTCGTAAATATCTCGCGCCCCGATGAGATCAAGTCTGCT
TCAACGCAGCGCACCATCCGACGCCATGTCATGCGTGACATTGGGAGATCACGTCGTACACGCCCGGAGCAACGA
ACTTGGTCTGTGGGCCTGAGAGCCCCGTCAGATCCAGTGACAGAACACATTCCAGCGCCGATTGACCCATGTAAT
ACGACATTTTATCCTACCCCTATGAGCGACCGAGCGCTACAGCTCATGCACTTCATGACTACGGACCGCGACTAC
GTGTTCCGTCCGTTCCGGACCGTCTGGTTCTCCATGGCATTAACTGACGCCACTGCCATCCTGGTGGCCTTGGCT
AATGCTGCCATGTTTCTCGATCAACGCCTGCGGGCCCAGGGTTATCAGTATGAGACCAGTACGGAGTGTCTGAGT
TACTACGGACAATGCGTTCGGCAGGTCACACACCGGCTGGCAGATACCCGTGAGAGTATTAGCCAAGGGGTCATC
ACGGCCATATTGGGCCTGACCTGTCACGATCTCTATGTTGGTACGTTAGATCGCTGGAAAATTCATATCAGTGGC
CTGGGCCGTATCCTCCACCTGAGGGGTGGATACCGGGGCCTAGACGATAGTATCACGCGCTTTGCCATTTGGCTT
GATGTTGTGGGCAGCGTGATGGAAGACTCTCGCCCTCGGTTGCCTACTCCGCCGGGGTATGCGGCTCGAATTCCC
GATATGCTGTCTCCCACTCTGAGAAGCCTTCTAAGGGACCTTATTGCAAGATACGATTGCTTCCGTGACGTCGCG
GCTGCCTTCAGTTATGCGAGCTTCATTGTCCAATACACTGACGGGTCCCTTTGTCGTTCCGAAACAGCCTGGGTA
AACGAGGATAACCTCACTGTCATTGAACTGTTTGGCCCAGCCACACATTTCCTGCTTTCCATGTCGAGGCCAACC
GAGTTGGATCCAATTGCAACAGAAAACCCAATTCTGTACCTCCGCGAAGCACTTCGGCTGGTGCTATTACTGTTT
CTTGCCACGATGAAGCAAGATATCTTCCTCTTTACCGCTCACGAACGCCAATATCTGCAGTGGAAGTTATCAACG
CTTATTCCACAGATGGAGAGAACCGACTACGACGACTCTTGTCTGAAACTGCATCTCTGGGTTCTTGTAACAGTG
TCTCGACTTTCTCATTCTACCCAGCCAGGGTTGTATCTTGACGATATCCGGTCCTTGCTGGACCTTCTCGGCATG
GGTAGCAAGGAAGGAACTGATCTTGTCGAAAACATCCTGTCCATTAACATTCTGGATGCCTATCATCCTTTTCTC
CCAGTGCTCAAGACATCCTCATGTTCATAG
Gene >Ani_SJS100_1|g9234.t1
ATGAAGCTGTCTCACCCGGTAGAGGACGATTTCGTCTTCGTAAATATCTCGCGCCCCGATGAGATCAAGTCTGCT
TCAACGCAGCGCACCATCCGACGCCATGTCATGCGTGACATTGGGAGATCACGTCGTACACGCCCGGAGCAACGA
ACTTGGTCTGTGGGCCTGAGAGCCCCGTCAGATCCAGTGACAGAACACATTCCAGCGCCGATTGACCCATGTAAT
ACGACATTTTATCCTACCCCTATGAGCGACCGAGCGCTACAGCTCATGCACTTCAGTATGCCCCTGCAATTACCG
GAGCCTCCTTGAGTTTGCCTATCTAACCTGCGTAGTGACTACGGACCGCGACTACGTGTTCCGTCCGTTCCGGAC
CGTCTGGTTCTCCATGGCATTAACTGACGCCACTGCCATCCTGGTGGCCTTGGCTAATGCTGCCATGTTTCTCGA
TCAACGCCTGCGGGCCCAGGGTTATCAGTATGAGACCAGTACGGAGTGTCTGAGTTACTACGGACAATGCGTTCG
GCAGGTCACACACCGGCTGGCAGATACCCGTGAGAGTATTAGCCAAGGGGTCATCACGGCCATATTGGGCCTGAC
CTGTCACGATGTTTGTCAATCTTCTCACCCTACCGCTGAATGAATGCTAAACGACAGATAGCTCTATGTTGGTAC
GTTAGATCGCTGGAAAATTCATATCAGTGGCCTGGGCCGTATCCTCCACCTGAGGGGTGGATACCGGGGCCTAGA
CGATAGTATCACGCGCTTTGCCATTTGGTAACCCCTTACATCCTCTCGTCCCGTCATACATCCATTGGCTAACTG
TTCGGCGTCAGGCTTGATGTTGTGGGCAGCGTGATGGAAGACTCTCGCCCTCGGTTGCCTACTCCGCCGGGGTAT
GCGGCTCGAATTCCCGATATGCTGTCTCCCACTCTGAGAAGCCTTCTAAGGGACCTTATTGCAAGATACGATTGC
TTCCGTGACGTCGCGGCTGCCTTCAGTTATGCGAGCTTCATTGTCCAATACACTGACGGGTCCCTTTGTCGTTCC
GAAACAGCCTGGGTAAACGAGGATAACCTCACTGTCATTGAACTGTTTGGCCCAGCCACACATTTCCTGCTTTCC
ATGTCGAGGCCAACCGAGTTGGATCCAATTGCAACAGAAAACCCAATTCTGTACCTCCGCGAAGCACTTCGGCTG
GTGCTATTACTGTTTCTTGCCACGATGAAGCAAGATATCTTCCTCTTTACCGCTCACGAACGCCAATATCTGCAG
TGGAAGTTATCAACGCTTATTCCACAGATGGAGAGAACCGACTACGACGACTCTTGTCTGAAACTGCATCTCTGG
GTTCTTGTAACAGTGTCTCGACTTTCTCATTCTACCCAGCCAGGGTTGTATCTTGACGATATCCGGTCCTTGCTG
GACCTTCTCGGCATGGGTAGCAAGGAAGGAACTGATCTTGTCGAAAACATCCTGTCCATTAACATTCTGGATGCC
TATCATCCTTTTCTCCCAGTGCTCAAGACATCCTCATGTTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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