Protein ID | Ani_SJS100_1|g9222.t1 |
Gene name | |
Location | scaffold_081:49241..50779 |
Strand | - |
Gene length (bp) | 1538 |
Transcript length (bp) | 1479 |
Coding sequence length (bp) | 1479 |
Protein length (aa) | 493 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03972 | MmgE_PrpD | MmgE/PrpD N-terminal domain | 2.5E-65 | 21 | 275 |
PF19305 | MmgE_PrpD_C | MmgE/PrpD C-terminal domain | 2.5E-44 | 295 | 473 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9222.t1 MTVIPAADDNSRKPYDAVIQAIVDYVYDYQIATDNAWARAKVALMDALGAALESIHTSPQCAQLVGPAFPIAPAT SGLFRLPGTAYQLDILKGAFDLGAMIRYLDHNDAFPGAEWGHPSDNLGAILAVADVRSRVALAEGDPDSIVTMQQ VLEALIKAYEIQGCFQIKNAFNKVGLDHTILVKIGATAVSAWLLDLPREQALSAVSHAWMDGHPLRVYRQAPNTG PRKGWAAGDACMRAVHLALLAKAGQPGANTVLTTPRWGFYDVLFKGQEFDLPQPFGTWVIETVLFKVNTAEGHGM TAVEAALEIANTLRARGLDPAKDIQSIHAKTQAAGMTIINKGGATLHNAADRDHCLRYMVAVVLLKGAQVETADY QDDSPWATDPRVDALRQKITMAEDPKYTADYHDMAVRSVANSLTVTLTDGTTLPEVLVEYPLGHVRRPETPQEVY AKAERNLGLRLSTDRVQQILKTVASEEFMSLPACHFVNLFSL* |
Coding | >Ani_SJS100_1|g9222.t1 ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGACTAT GTCTACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGCCACC TCGGGTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCATCCCTCGGATAACCTTGGTGCCATT CTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAG GTTCTGGAGGCCTTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGTCGGG TTAGACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCTCGCGAGCAA GCCCTTAGTGCTGTATCCCACGCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACACCGGT CCGCGCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAA CCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAATTCGAT CTCCCCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATG ACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATATCCAG TCAATCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCATAACGCCGCA GATCGTGACCACTGTCTGCGGTACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGACTAC CAGGACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAGGACCCC AAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGACGGC ACGACGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAAGTTTAC GCAAAAGCAGAGCGGAATCTGGGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGCATCG GAGGAGTTTATGTCGCTACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAA |
Transcript | >Ani_SJS100_1|g9222.t1 ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGACTAT GTCTACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGCCACC TCGGGTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCATCCCTCGGATAACCTTGGTGCCATT CTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAG GTTCTGGAGGCCTTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGTCGGG TTAGACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCTCGCGAGCAA GCCCTTAGTGCTGTATCCCACGCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACACCGGT CCGCGCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAA CCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAATTCGAT CTCCCCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATG ACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATATCCAG TCAATCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCATAACGCCGCA GATCGTGACCACTGTCTGCGGTACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGACTAC CAGGACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAGGACCCC AAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGACGGC ACGACGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAAGTTTAC GCAAAAGCAGAGCGGAATCTGGGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGCATCG GAGGAGTTTATGTCGCTACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAA |
Gene | >Ani_SJS100_1|g9222.t1 ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGACTAT GTCTACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGCCACC TCGGGTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCATCCCTCGGGTGAGCTACAGACCACT TTAGCGACTGTCAAGTCACATACACTAACAATATTAATTTAGATAACCTTGGTGCCATTCTGGCCGTCGCAGATG TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGAGGCCTTGA TCAAGGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTAGACCACACCATCC TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCTCGCGAGCAAGCCCTTAGTGCTGTAT CCCACGCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGATGGG CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGG TGCTGACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG GCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCG CGCTGGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCATAACGCCGCAGATCGTGACCACTGTC TGCGGTACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGCCCCT GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAGGACCCCAAATACACAGCCGATT ATCATGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAAGTTTACGCAAAAGCAGAGCGGA ATCTGGGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC TACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAA |