© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g9214.t1 |
| Gene name | |
| Location | scaffold_081:20706..21541 |
| Strand | - |
| Gene length (bp) | 835 |
| Transcript length (bp) | 654 |
| Coding sequence length (bp) | 654 |
| Protein length (aa) | 218 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| 2 | 65 | 82 | 17 |
| 3 | 95 | 117 | 22 |
| 4 | 154 | 176 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9214.t1 MAPLIRNISRQEVQWVNSSSSCTYNKICFFRRTGFVVYLADHATIIGHFLIISASNRYNELQDQSIPGVLSLLLI FDSFWPERKETRCIQWTWKLGAAAASLSQLAACIVITLIVATQGIQIHGVSADEEAAIRGNWNWISLAYGKDGRT VAGLVFYWIGCVFMFWSTIAMWHCYAYHNIHWPFANHARQRRSHGAKTVLRSSVILNSSELAEPRGN* |
| Coding | >Ani_SJS100_1|g9214.t1 ATGGCCCCCTTGATACGCAACATCTCCCGGCAGGAGGTGCAATGGGTCAACTCCAGCAGCTCCTGCACGTACAAC AAGATCTGTTTCTTCAGGCGAACCGGGTTCGTGGTCTACCTAGCTGACCATGCTACTATCATTGGACATTTCCTG ATCATCTCTGCTAGCAACCGCTACAATGAACTACAGGACCAATCTATACCGGGCGTCTTGAGCCTCCTCCTGATA TTCGACTCTTTCTGGCCGGAGCGGAAAGAGACCCGTTGCATTCAGTGGACATGGAAACTTGGTGCTGCTGCGGCA AGTCTGTCCCAACTAGCAGCATGCATAGTAATTACACTTATCGTGGCGACCCAGGGAATTCAGATACACGGCGTG TCAGCGGATGAAGAGGCAGCCATCCGCGGCAACTGGAACTGGATCTCTTTGGCGTACGGAAAAGATGGCCGGACA GTAGCTGGGCTAGTGTTCTATTGGATCGGATGTGTATTCATGTTCTGGAGTACCATTGCCATGTGGCATTGCTAC GCGTACCACAACATTCACTGGCCGTTTGCCAATCATGCGAGACAAAGACGGAGCCACGGAGCCAAGACGGTGTTA AGGTCTTCAGTTATACTCAACTCTAGTGAATTAGCTGAGCCTCGTGGGAATTAG |
| Transcript | >Ani_SJS100_1|g9214.t1 ATGGCCCCCTTGATACGCAACATCTCCCGGCAGGAGGTGCAATGGGTCAACTCCAGCAGCTCCTGCACGTACAAC AAGATCTGTTTCTTCAGGCGAACCGGGTTCGTGGTCTACCTAGCTGACCATGCTACTATCATTGGACATTTCCTG ATCATCTCTGCTAGCAACCGCTACAATGAACTACAGGACCAATCTATACCGGGCGTCTTGAGCCTCCTCCTGATA TTCGACTCTTTCTGGCCGGAGCGGAAAGAGACCCGTTGCATTCAGTGGACATGGAAACTTGGTGCTGCTGCGGCA AGTCTGTCCCAACTAGCAGCATGCATAGTAATTACACTTATCGTGGCGACCCAGGGAATTCAGATACACGGCGTG TCAGCGGATGAAGAGGCAGCCATCCGCGGCAACTGGAACTGGATCTCTTTGGCGTACGGAAAAGATGGCCGGACA GTAGCTGGGCTAGTGTTCTATTGGATCGGATGTGTATTCATGTTCTGGAGTACCATTGCCATGTGGCATTGCTAC GCGTACCACAACATTCACTGGCCGTTTGCCAATCATGCGAGACAAAGACGGAGCCACGGAGCCAAGACGGTGTTA AGGTCTTCAGTTATACTCAACTCTAGTGAATTAGCTGAGCCTCGTGGGAATTAG |
| Gene | >Ani_SJS100_1|g9214.t1 ATGGCCCCCTTGATACGCAACATCTCCCGGCAGGAGGTGCAATGGGTCAACTCCAGCAGCTCCTGCACGTACAAC AAGATCTGTTTCTTCAGGCGAACCGGGTTCGTGGTCTACCTAGCTGACCATGCTACTATCATTGGACATTTCCTG ATCATCTCTGCTAGCAACCGTACGCTTGCCTTTCCCCCCTTGTTCATCTATACTGACGGCTCGACAGGCTACAAT GAACTACAGGACCAATCTATACCGGGTTCCCTGATGCTCGGATTAACACCAGCAACCTACTTAGCAGCTTCGCTT TCGGGATGTGCGCTTGCATCCTTCCATTAGGCGTCTTGAGCCTCCTCCTGATATTCGACTCTTTCTGGCCGGAGC GGAAAGAGACCCGTTGCATTCAGTGGACATGGAAACTTGGTGCTGCTGCGGCAAGTCTGTCCCAACTAGCAGCAT GCATAGTAATTACACTTATCGTGGCGACCCAGGGAATTCAGATACACGGCGTGTCAGCGGATGAAGAGGCAGCCA TCCGCGGCAACTGGAACTGGATCTCTTTGGCGTACGGAAAAGATGGCCGGACAGTAGCTGGGCTAGTGTTCTATT GGATCGGATGTGTATTCATGTTCTGGAGGTAAGTGCTTGGATGGATGGATGTGATGAGACAATATCTAACCCATG TACCAGTACCATTGCCATGTGGCATTGCTACGCGTACCACAACATTCACTGGCCGTTTGCCAATCATGCGAGACA AAGACGGAGCCACGGAGCCAAGACGGTGTTAAGGTCTTCAGTTATACTCAACTCTAGTGAATTAGCTGAGCCTCG TGGGAATTAG |