Protein ID | Ani_SJS100_1|g9181.t1 |
Gene name | |
Location | scaffold_080:57088..58345 |
Strand | + |
Gene length (bp) | 1257 |
Transcript length (bp) | 1155 |
Coding sequence length (bp) | 1155 |
Protein length (aa) | 385 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06391 | MAT1 | CDK-activating kinase assembly factor MAT1 | 5.4E-40 | 68 | 247 |
PF17121 | zf-C3HC4_5 | Zinc finger, C3HC4 type (RING finger) | 7.1E-33 | 15 | 65 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9181.t1 MPPARDIMAHRGDDDEVCPVCKSSRYLNPDMRFLINPECYHKMCESCVDRIFSSGPANCPVAGCHKTLRKNRFRK QTFEDIDVEREVDIRRRVMQILNRREEEFDSKRAYDDFLEQREEIIANLVHGTDVAKTESDLQRYAADNMRSIRA NQALEAQEASSFREQQTHEQELARLRREAARLEYENERKEMLAGREDVLSRLAAGRPGDAAAIAREGHKVLLKKS SARRSEEDRIRQKQAALRSSDARKAGQGALTTADRADDSGDSGLIKGLKKIVTPEPEKPYDPFGGLVPNKRDYYT LRDYYPNSYLDPIRQDTRMQAGGYDLQEYYSRTLMEAFAGLGCFIDEEVSKREVTSTMGISRPVATEGAALAAVS SAGAPEASS* |
Coding | >Ani_SJS100_1|g9181.t1 ATGCCTCCTGCTCGTGATATCATGGCTCACCGGGGGGATGACGACGAGGTGTGCCCTGTCTGCAAATCCTCCCGT TACCTGAACCCAGACATGCGATTTCTCATCAATCCCGAATGCTACCACAAGATGTGCGAGTCCTGCGTGGACCGA ATCTTCTCCTCAGGCCCTGCGAACTGTCCCGTGGCGGGCTGTCACAAGACCCTGCGCAAGAACCGATTTCGCAAG CAGACATTCGAGGATATTGATGTGGAAAGAGAGGTGGACATTCGGCGCAGAGTAATGCAAATTCTTAACCGCCGC GAAGAAGAGTTTGATTCGAAACGAGCCTATGATGACTTCCTCGAACAACGCGAAGAGATAATAGCGAACCTTGTC CATGGCACAGATGTGGCGAAGACAGAAAGCGACCTACAAAGATATGCTGCAGACAACATGCGGTCGATTCGCGCC AATCAAGCCCTCGAAGCGCAAGAGGCCTCATCCTTCCGAGAACAACAAACACACGAACAAGAACTGGCACGTCTT CGGCGAGAGGCAGCTAGACTGGAATATGAGAACGAACGGAAGGAGATGCTTGCCGGCCGGGAAGACGTTCTCAGC CGTCTTGCGGCAGGTCGACCTGGCGACGCAGCGGCTATCGCCCGCGAAGGTCACAAGGTGCTGCTTAAGAAATCT TCTGCTCGCCGCAGTGAAGAAGACCGGATTCGACAGAAGCAGGCTGCTTTGCGCAGCTCAGATGCCAGGAAAGCT GGGCAGGGCGCCCTTACCACGGCGGACAGGGCGGATGACAGTGGTGATTCTGGCTTGATCAAGGGTCTTAAGAAG ATTGTGACGCCCGAGCCTGAGAAGCCTTATGATCCTTTTGGTGGCCTTGTTCCCAACAAGAGGGACTACTATACT CTGCGCGACTATTACCCGAACAGCTATCTCGACCCCATTCGCCAGGACACTCGTATGCAGGCTGGTGGATACGAC CTTCAGGAATACTACTCGCGTACTTTGATGGAGGCCTTTGCGGGTTTGGGTTGCTTCATCGATGAGGAGGTGTCT AAGCGAGAGGTTACAAGTACGATGGGTATCTCTAGACCCGTCGCTACAGAAGGGGCTGCCTTGGCGGCTGTTTCA AGTGCAGGCGCCCCAGAAGCCAGCTCGTGA |
Transcript | >Ani_SJS100_1|g9181.t1 ATGCCTCCTGCTCGTGATATCATGGCTCACCGGGGGGATGACGACGAGGTGTGCCCTGTCTGCAAATCCTCCCGT TACCTGAACCCAGACATGCGATTTCTCATCAATCCCGAATGCTACCACAAGATGTGCGAGTCCTGCGTGGACCGA ATCTTCTCCTCAGGCCCTGCGAACTGTCCCGTGGCGGGCTGTCACAAGACCCTGCGCAAGAACCGATTTCGCAAG CAGACATTCGAGGATATTGATGTGGAAAGAGAGGTGGACATTCGGCGCAGAGTAATGCAAATTCTTAACCGCCGC GAAGAAGAGTTTGATTCGAAACGAGCCTATGATGACTTCCTCGAACAACGCGAAGAGATAATAGCGAACCTTGTC CATGGCACAGATGTGGCGAAGACAGAAAGCGACCTACAAAGATATGCTGCAGACAACATGCGGTCGATTCGCGCC AATCAAGCCCTCGAAGCGCAAGAGGCCTCATCCTTCCGAGAACAACAAACACACGAACAAGAACTGGCACGTCTT CGGCGAGAGGCAGCTAGACTGGAATATGAGAACGAACGGAAGGAGATGCTTGCCGGCCGGGAAGACGTTCTCAGC CGTCTTGCGGCAGGTCGACCTGGCGACGCAGCGGCTATCGCCCGCGAAGGTCACAAGGTGCTGCTTAAGAAATCT TCTGCTCGCCGCAGTGAAGAAGACCGGATTCGACAGAAGCAGGCTGCTTTGCGCAGCTCAGATGCCAGGAAAGCT GGGCAGGGCGCCCTTACCACGGCGGACAGGGCGGATGACAGTGGTGATTCTGGCTTGATCAAGGGTCTTAAGAAG ATTGTGACGCCCGAGCCTGAGAAGCCTTATGATCCTTTTGGTGGCCTTGTTCCCAACAAGAGGGACTACTATACT CTGCGCGACTATTACCCGAACAGCTATCTCGACCCCATTCGCCAGGACACTCGTATGCAGGCTGGTGGATACGAC CTTCAGGAATACTACTCGCGTACTTTGATGGAGGCCTTTGCGGGTTTGGGTTGCTTCATCGATGAGGAGGTGTCT AAGCGAGAGGTTACAAGTACGATGGGTATCTCTAGACCCGTCGCTACAGAAGGGGCTGCCTTGGCGGCTGTTTCA AGTGCAGGCGCCCCAGAAGCCAGCTCGTGA |
Gene | >Ani_SJS100_1|g9181.t1 ATGCCTCCTGCTCGTGATATCATGGCTCACCGGGGGGATGACGACGGTGAGTCTATTGCTAATGACACTTGAATA TTCACTGACTGCCAGCAGAGGTGTGCCCTGTCTGCAAATCCTCCCGTTACCTGAACCCAGACATGCGATTTCTCA TCAATCCCGAATGCTACCACAAGATGTGCGAGTCCTGCGTGGACCGAATCTTCTCCTCAGGCCCTGCGAACTGTC CCGTGGCGGGCTGTCACAAGACCCTGCGCAAGAACCGATTTCGCAAGCAGACATTCGAGGATATTGATGTGGAAA GAGAGGTGGACATTCGGCGCAGAGTAATGCAAATGTATGCCAATATTAAATTTGCTAGACCCTGGAATAAGCCAC TAATCTTCCTCTAGTCTTAACCGCCGCGAAGAAGAGTTTGATTCGAAACGAGCCTATGATGACTTCCTCGAACAA CGCGAAGAGATAATAGCGAACCTTGTCCATGGCACAGATGTGGCGAAGACAGAAAGCGACCTACAAAGATATGCT GCAGACAACATGCGGTCGATTCGCGCCAATCAAGCCCTCGAAGCGCAAGAGGCCTCATCCTTCCGAGAACAACAA ACACACGAACAAGAACTGGCACGTCTTCGGCGAGAGGCAGCTAGACTGGAATATGAGAACGAACGGAAGGAGATG CTTGCCGGCCGGGAAGACGTTCTCAGCCGTCTTGCGGCAGGTCGACCTGGCGACGCAGCGGCTATCGCCCGCGAA GGTCACAAGGTGCTGCTTAAGAAATCTTCTGCTCGCCGCAGTGAAGAAGACCGGATTCGACAGAAGCAGGCTGCT TTGCGCAGCTCAGATGCCAGGAAAGCTGGGCAGGGCGCCCTTACCACGGCGGACAGGGCGGATGACAGTGGTGAT TCTGGCTTGATCAAGGGTCTTAAGAAGATTGTGACGCCCGAGCCTGAGAAGCCTTATGATCCTTTTGGTGGCCTT GTTCCCAACAAGAGGGACTACTATACTCTGCGCGACTATTACCCGAACAGCTATCTCGACCCCATTCGCCAGGAC ACTCGTATGCAGGCTGGTGGATACGACCTTCAGGAATACTACTCGCGTACTTTGATGGAGGCCTTTGCGGGTTTG GGTTGCTTCATCGATGAGGAGGTGTCTAAGCGAGAGGTTACAAGTACGATGGGTATCTCTAGACCCGTCGCTACA GAAGGGGCTGCCTTGGCGGCTGTTTCAAGTGCAGGCGCCCCAGAAGCCAGCTCGTGA |