Protein ID | Ani_SJS100_1|g9175.t1 |
Gene name | |
Location | scaffold_080:36263..37825 |
Strand | - |
Gene length (bp) | 1562 |
Transcript length (bp) | 1326 |
Coding sequence length (bp) | 1326 |
Protein length (aa) | 442 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01569 | PAP2 | PAP2 superfamily | 1.8E-31 | 127 | 274 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 21 | 40 | 19 |
2 | 69 | 91 | 22 |
3 | 120 | 142 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9175.t1 MDRLPDKLPFSKRRLKQRVILSYIFDYVILIACIGGFYVLDSIEPYHQHFSLRNISIQYPYAVHERITIQEALCI SGLAPLVIIIVYTLFIDGLFSHHKTQHPVSGKRKFTGPYRWKDRLWELNCGILGLLLSQGLAFVITQVLKNACGK PRPDFIDRCQPRAGSQDAIPGLSNSTICTGEHALIKDGFRSWPSGHSSSSFAGLFYLTLWLSGKLHIMDNRGEAW KTLLVMIPSLAATLVAVSRIMDARHHPFDVITGSLLGIICACISYRQYFPSLNEPWKKGRAYPIRTWGRDPVGPV ETVRLVGTDGSTAALRNPEEERLNEAPQSKTTGSDAGRPLYLPESNPYTTNMYGYSRRDEDDNWSSSSEDVAGGY EMQPGYARTQNPALNGPTARLDVDTAYHSQTPQVVLGAATTHETPGAIPTHADRGRDLTDMPYREV* |
Coding | >Ani_SJS100_1|g9175.t1 ATGGACCGTCTACCCGATAAGTTGCCTTTCTCAAAGCGGCGCCTGAAGCAGCGGGTCATTCTATCATATATCTTT GACTATGTTATCCTTATTGCGTGCATTGGAGGCTTCTACGTCCTTGATTCTATTGAACCATATCACCAGCACTTT TCGTTACGAAATATCTCAATTCAGTATCCTTATGCAGTCCACGAGCGTATAACCATTCAGGAAGCCCTCTGTATC TCCGGCCTGGCACCCCTCGTCATTATTATCGTCTATACGCTATTCATCGACGGGCTTTTCTCGCACCACAAGACG CAGCATCCAGTCTCGGGGAAGAGAAAATTCACTGGTCCATATAGATGGAAGGATCGGTTGTGGGAGCTCAACTGT GGTATCTTGGGACTCTTGCTCTCACAAGGGCTGGCGTTTGTCATTACGCAGGTGCTGAAAAATGCTTGTGGAAAG CCCCGGCCTGACTTCATTGATCGGTGTCAGCCTCGCGCAGGAAGTCAGGACGCGATACCCGGGCTGTCGAACTCC ACTATCTGTACTGGCGAACATGCACTTATCAAAGACGGCTTCCGATCATGGCCTTCAGGACATAGTAGCTCTTCA TTTGCCGGATTATTCTATCTCACGCTTTGGCTTAGTGGCAAGCTGCACATAATGGACAACCGCGGCGAGGCCTGG AAGACACTCTTGGTCATGATCCCGTCTCTTGCAGCAACGCTTGTTGCGGTGAGCCGTATTATGGATGCAAGGCAT CATCCGTTCGATGTCATCACTGGATCGCTCCTAGGTATTATCTGCGCCTGCATCTCGTACCGTCAATATTTCCCT TCACTCAACGAGCCTTGGAAGAAAGGACGCGCCTATCCCATCCGGACATGGGGCAGGGATCCCGTGGGGCCTGTC GAGACTGTCCGCCTGGTGGGTACTGATGGAAGCACTGCCGCTCTGAGGAACCCGGAGGAGGAGCGATTGAATGAA GCTCCTCAGTCGAAGACGACCGGAAGTGATGCTGGTAGGCCCTTGTACCTACCGGAATCTAATCCATACACTACA AACATGTACGGCTACTCAAGACGTGACGAGGACGACAACTGGTCGTCCTCCAGCGAGGATGTTGCTGGTGGATAT GAGATGCAACCTGGCTATGCCCGGACACAGAACCCAGCATTGAACGGACCAACGGCGCGACTCGATGTTGATACG GCGTACCACTCCCAGACCCCTCAGGTCGTACTTGGTGCCGCCACTACCCACGAAACACCGGGCGCGATTCCGACT CATGCGGACCGAGGGCGTGACCTTACAGATATGCCGTACCGGGAAGTCTGA |
Transcript | >Ani_SJS100_1|g9175.t1 ATGGACCGTCTACCCGATAAGTTGCCTTTCTCAAAGCGGCGCCTGAAGCAGCGGGTCATTCTATCATATATCTTT GACTATGTTATCCTTATTGCGTGCATTGGAGGCTTCTACGTCCTTGATTCTATTGAACCATATCACCAGCACTTT TCGTTACGAAATATCTCAATTCAGTATCCTTATGCAGTCCACGAGCGTATAACCATTCAGGAAGCCCTCTGTATC TCCGGCCTGGCACCCCTCGTCATTATTATCGTCTATACGCTATTCATCGACGGGCTTTTCTCGCACCACAAGACG CAGCATCCAGTCTCGGGGAAGAGAAAATTCACTGGTCCATATAGATGGAAGGATCGGTTGTGGGAGCTCAACTGT GGTATCTTGGGACTCTTGCTCTCACAAGGGCTGGCGTTTGTCATTACGCAGGTGCTGAAAAATGCTTGTGGAAAG CCCCGGCCTGACTTCATTGATCGGTGTCAGCCTCGCGCAGGAAGTCAGGACGCGATACCCGGGCTGTCGAACTCC ACTATCTGTACTGGCGAACATGCACTTATCAAAGACGGCTTCCGATCATGGCCTTCAGGACATAGTAGCTCTTCA TTTGCCGGATTATTCTATCTCACGCTTTGGCTTAGTGGCAAGCTGCACATAATGGACAACCGCGGCGAGGCCTGG AAGACACTCTTGGTCATGATCCCGTCTCTTGCAGCAACGCTTGTTGCGGTGAGCCGTATTATGGATGCAAGGCAT CATCCGTTCGATGTCATCACTGGATCGCTCCTAGGTATTATCTGCGCCTGCATCTCGTACCGTCAATATTTCCCT TCACTCAACGAGCCTTGGAAGAAAGGACGCGCCTATCCCATCCGGACATGGGGCAGGGATCCCGTGGGGCCTGTC GAGACTGTCCGCCTGGTGGGTACTGATGGAAGCACTGCCGCTCTGAGGAACCCGGAGGAGGAGCGATTGAATGAA GCTCCTCAGTCGAAGACGACCGGAAGTGATGCTGGTAGGCCCTTGTACCTACCGGAATCTAATCCATACACTACA AACATGTACGGCTACTCAAGACGTGACGAGGACGACAACTGGTCGTCCTCCAGCGAGGATGTTGCTGGTGGATAT GAGATGCAACCTGGCTATGCCCGGACACAGAACCCAGCATTGAACGGACCAACGGCGCGACTCGATGTTGATACG GCGTACCACTCCCAGACCCCTCAGGTCGTACTTGGTGCCGCCACTACCCACGAAACACCGGGCGCGATTCCGACT CATGCGGACCGAGGGCGTGACCTTACAGATATGCCGTACCGGGAAGTCTGA |
Gene | >Ani_SJS100_1|g9175.t1 ATGGACCGTCTACCCGATAAGTTGCCTTTCTCAAAGCGGCGCCTGAAGCAGCGGGTCATTCTATCGTGAGAATTG AACTCCAAGGAGAGGAATGCTACCTCATCGCTAATATGAGTCGTCCATGGCAGATATATCTTTGACTATGTTATC CTTATGTTAGTTCTTCCTGTTGGCGGATCATCGACGGCGTTTGCTAATAACCGCTGAAACAGTGCGTGCATTGGA GGCTTCTACGTCCTTGATTCTATTGAACCATATCACCAGCACTTTTCGTTACGAAATATCTCAATTCAGTATCCT TATGCAGTCCACGAGCGTATAACCATTCAGGAAGCCCTCTGTATCTCCGGCCTGGCACCCCTCGTCATTATTATC GTCTATACGCTATTCATCGACGGGCTTTTCTCGCACCACAAGACGCAGCATCCAGTCTCGGGGAAGAGAAAATTC ACTGGTCCATATAGATGGAAGGATCGGTTGTGGGAGCTCAACTGTGGTATCTTGGGACTCTTGCTCTCACAAGGG CTGGCGTTTGTCATTACGCAGGTGCTGAAAAATGCTTGTGGAAAGCCCCGGCCTGACTTCATTGATCGGTGTCAG CCTCGCGCAGGAAGTCAGGACGCGATACCCGGGCTGTCGAACTCCACTATCTGTACTGGCGAACATGCACTTATC AAAGACGGCTTCCGATCATGGCCTTCAGGTAGGACAGCGCTTCAAAAGTTCTGAACACGTTTCAAATGCTAATCC GTGGTGATAGGACATAGTAGCTGTGAGAGACCCACCTACCTTTTCACAAACGCGCATTGAGAACTAATATAATCA TTACAGCTTCATTTGCCGGATTATTCTATCTCACGCTTTGGCTTAGTGGCAAGCTGCACATAATGGACAACCGCG GCGAGGCCTGGAAGACACTCTTGGTCATGATCCCGTCTCTTGCAGCAACGCTTGTTGCGGTGAGCCGTATTATGG ATGCAAGGCATCATCCGTTCGATGTCATCACTGGATCGCTCCTAGGTATTATCTGCGCCTGCATCTCGTACCGTC AATATTTCCCTTCACTCAACGAGCCTTGGAAGAAAGGACGCGCCTATCCCATCCGGACATGGGGCAGGGATCCCG TGGGGCCTGTCGAGACTGTCCGCCTGGTGGGTACTGATGGAAGCACTGCCGCTCTGAGGAACCCGGAGGAGGAGC GATTGAATGAAGCTCCTCAGTCGAAGACGACCGGAAGTGATGCTGGTAGGCCCTTGTACCTACCGGAATCTAATC CATACACTACAAACATGTACGGCTACTCAAGACGTGACGAGGACGACAACTGGTCGTCCTCCAGCGAGGATGTTG CTGGTGGATATGAGATGCAACCTGGCTATGCCCGGACACAGAACCCAGCATTGAACGGACCAACGGCGCGACTCG ATGTTGATACGGCGTACCACTCCCAGACCCCTCAGGTCGTACTTGGTGCCGCCACTACCCACGAAACACCGGGCG CGATTCCGACTCATGCGGACCGAGGGCGTGACCTTACAGATATGCCGTACCGGGAAGTCTGA |