Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g9172.t1
Gene name
Location	scaffold_080:29792..30483
Strand	+
Gene length (bp)	691
Transcript length (bp)	612
Coding sequence length (bp)	612
Protein length (aa)	204

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF18126	Mitoc_mL59	Mitochondrial ribosomal protein mL59	4.4E-49	16	190

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 14	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g9172.t1 MATTQTSSLVSKLPIRLRNFFARYPPQIYSAAVAPRPEAPETGAPVNVKVEDLPSPYTPNRDAKGFKRPDPKAFS PSKAILHSDSKHPNPFLPRKNFRTGKWFGPRIGLRRQAELVKLAIKYNVEALLPPGRKSTEFKETRRAERGLAIK GTGIGQKVKGHKWERTMEARLEDRRKAMMEMPEMIRLWKQRGHGRGWKSWPKR*
Coding	>Ani_SJS100_1\|g9172.t1 ATGGCCACCACACAAACCAGCAGCTTGGTATCCAAGCTCCCCATCCGCCTCCGCAATTTCTTCGCGCGCTATCCT CCGCAAATCTATTCCGCAGCCGTAGCACCACGCCCCGAAGCCCCCGAAACAGGTGCCCCCGTCAACGTCAAAGTC GAGGATCTGCCCTCTCCTTACACGCCCAACCGTGATGCGAAGGGCTTCAAGCGTCCCGACCCTAAAGCGTTCTCT CCCTCCAAGGCCATCCTGCACTCCGACTCCAAGCACCCCAACCCGTTCCTGCCGCGCAAGAACTTCCGCACCGGT AAGTGGTTCGGACCCCGGATTGGACTGCGTCGACAGGCGGAGCTGGTGAAGCTGGCGATCAAATACAACGTTGAG GCATTGTTGCCGCCTGGCCGCAAGTCGACGGAGTTCAAGGAGACGAGACGTGCGGAGCGTGGTTTGGCTATCAAG GGTACTGGTATCGGACAGAAGGTCAAGGGTCACAAGTGGGAGAGGACAATGGAGGCTCGTCTGGAGGACAGACGC AAGGCTATGATGGAGATGCCGGAGATGATCCGTTTGTGGAAGCAGAGAGGTCACGGTCGTGGCTGGAAGTCGTGG CCCAAGCGGTAA
Transcript	>Ani_SJS100_1\|g9172.t1 ATGGCCACCACACAAACCAGCAGCTTGGTATCCAAGCTCCCCATCCGCCTCCGCAATTTCTTCGCGCGCTATCCT CCGCAAATCTATTCCGCAGCCGTAGCACCACGCCCCGAAGCCCCCGAAACAGGTGCCCCCGTCAACGTCAAAGTC GAGGATCTGCCCTCTCCTTACACGCCCAACCGTGATGCGAAGGGCTTCAAGCGTCCCGACCCTAAAGCGTTCTCT CCCTCCAAGGCCATCCTGCACTCCGACTCCAAGCACCCCAACCCGTTCCTGCCGCGCAAGAACTTCCGCACCGGT AAGTGGTTCGGACCCCGGATTGGACTGCGTCGACAGGCGGAGCTGGTGAAGCTGGCGATCAAATACAACGTTGAG GCATTGTTGCCGCCTGGCCGCAAGTCGACGGAGTTCAAGGAGACGAGACGTGCGGAGCGTGGTTTGGCTATCAAG GGTACTGGTATCGGACAGAAGGTCAAGGGTCACAAGTGGGAGAGGACAATGGAGGCTCGTCTGGAGGACAGACGC AAGGCTATGATGGAGATGCCGGAGATGATCCGTTTGTGGAAGCAGAGAGGTCACGGTCGTGGCTGGAAGTCGTGG CCCAAGCGGTAA
Gene	>Ani_SJS100_1\|g9172.t1 ATGGCCACCACACAAACCAGCAGCTTGGTATCCAAGCTCCCCATCCGCCTCCGCAATTTCTTCGCGCGCTATCCT CCGCAAATCTATTCCGCAGCCGTAGCACCACGCCCCGAAGCCCCCGAAACAGGTGCCCCCGTCAACGTCAAAGTC GAGGATCTGCCCTCTCCTTACACGCCCAACCGTGATGCGAAGGGCTTCAAGCGTCCCGACCCTAAAGCGTTCTCT CCCTCCAAGGCCATCCTGCACTCCGACTCCAAGCACCCCAACCCGTTCCTGCCGCGCAAGAACTTCCGCACCGGT AAGTGGTTCGGACCCCGGATTGGACTGCGTCGACAGGCGGAGCTGGTGAAGCTGGCGATCAAATACAACGTTGAG GCATTGTTGCCGCCTGGCCGCAAGTCGACGGAGTTCAAGGAGACGAGACGTGCGGAGCGTGGTTTGGCTATCAAG GGTACTGGTATCGGACAGAAGGTCAAGGGTCACAAGTGGGAGAGGACAATGGAGGCTCGTCTGGAGGACAGACGC AAGGCTATGATGGAGATGCCGGAGATGATCCGTTTGTGGAAGCAGGTTAGTTTTCCCTCTCTATTCCTTTCCTTT GTTCGGTATGCAGGATGGTGCACTGACTTGATATCACTTAACTCTACAGAGAGGTCACGGTCGTGGCTGGAAGTC GTGGCCCAAGCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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