© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9168.t1 |
| Gene name | |
| Location | scaffold_080:17303..19230 |
| Strand | + |
| Gene length (bp) | 1927 |
| Transcript length (bp) | 1650 |
| Coding sequence length (bp) | 1650 |
| Protein length (aa) | 550 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.2E-91 | 50 | 484 |
| PF00324 | AA_permease | Amino acid permease | 3.1E-16 | 63 | 459 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 50 | 72 | 22 |
| 2 | 82 | 104 | 22 |
| 3 | 135 | 157 | 22 |
| 4 | 172 | 194 | 22 |
| 5 | 199 | 221 | 22 |
| 6 | 241 | 263 | 22 |
| 7 | 276 | 298 | 22 |
| 8 | 328 | 347 | 19 |
| 9 | 373 | 395 | 22 |
| 10 | 405 | 427 | 22 |
| 11 | 439 | 461 | 22 |
| 12 | 476 | 498 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9168.t1 MTDPVVESAYQKGILPDAKAVEEGPRRTDGVSGLYEGNVFEATPDDRRQIGVISASFLIFNRVIGTGIFATPSTI LSLSGSVGLSLIMWVIGTLIAMAGTAVYLEWGTAIPKNGGEKNYLEYVFKKPKFLMTAMYAAYAVLLGWAASNSV VFGEYILNAADIEVDRWNQRGIGLACITAAFLIHSFAVKWGLMLQNFLGVVKLVIILFVIVAGWVALGGHMKIDP PHNFTNAFEGTTDTGYGIVMALYNVIWSFIGYSNANYALSETKNPTRTLKIAAPIAIISVGIMYMLCNIAYFAAV PKEQFLSSGQTVAAAFFGNMFGARAEKVMSVFVALSAFGNVLSVIFSQGRIVQALGREGVLPLSKIWASNRPFNS PAAGLFEHWVVSVIIMLAPPPGDAYNFLVNLISYPLSIVNVFVSGGLIYIYLTKEKNFPDWSPGIRATLPVTIFF CLSNMYLVVAPYVPPSAGQSVYNSLPYYLHCVVALGIFALGAIYYLVWAVLMPRFGRYILVKESVVDADGWSRSV FTKMPIEQAEALRHEGQQQGEHHF* |
| Coding | >Ani_SJS100_1|g9168.t1 ATGACGGACCCAGTTGTGGAATCTGCGTATCAAAAGGGCATCCTGCCCGACGCCAAGGCTGTCGAGGAAGGCCCT CGTCGAACGGATGGCGTTTCCGGTTTGTATGAAGGAAATGTCTTCGAGGCTACCCCGGATGACCGTCGCCAGATT GGCGTCATCAGTGCCTCCTTTCTGATCTTCAACCGTGTCATTGGTACTGGTATCTTCGCTACCCCGAGTACTATC CTGTCTTTGTCGGGTAGTGTTGGTCTGTCTCTGATCATGTGGGTCATTGGTACCTTGATTGCCATGGCTGGTACT GCTGTTTATCTGGAATGGGGTACTGCTATTCCTAAGAACGGTGGAGAAAAGAACTACCTCGAATATGTCTTCAAG AAGCCCAAGTTCCTGATGACGGCCATGTACGCGGCCTATGCAGTCCTGCTGGGTTGGGCCGCCAGTAACAGTGTC GTCTTTGGCGAGTATATTCTGAACGCGGCGGACATCGAAGTGGATCGCTGGAACCAGCGTGGTATTGGTTTGGCT TGTATCACCGCTGCCTTCCTCATCCATTCCTTCGCTGTCAAGTGGGGTCTCATGCTTCAGAACTTTCTGGGTGTG GTCAAGCTGGTCATCATCCTTTTCGTCATCGTCGCCGGATGGGTGGCTCTCGGCGGCCATATGAAGATCGATCCT CCTCACAACTTCACCAACGCGTTCGAGGGTACCACTGACACCGGCTATGGCATTGTCATGGCGTTGTATAATGTC ATCTGGTCCTTCATCGGGTACTCGAATGCCAACTACGCCTTGAGCGAGACGAAGAACCCTACCCGTACCCTGAAG ATCGCCGCCCCCATTGCCATCATCTCCGTCGGTATCATGTACATGCTGTGCAACATCGCATACTTTGCTGCTGTC CCGAAGGAGCAGTTCCTGTCCTCTGGCCAGACCGTCGCCGCCGCCTTCTTCGGCAACATGTTCGGTGCGCGCGCA GAGAAGGTGATGTCGGTCTTTGTGGCCCTGTCTGCATTTGGTAATGTTCTGTCGGTCATCTTCTCGCAAGGACGA ATTGTCCAAGCCCTCGGTCGCGAAGGAGTCCTCCCTCTGTCGAAGATCTGGGCCAGCAACCGGCCGTTCAACTCG CCCGCCGCTGGCCTCTTCGAGCACTGGGTAGTGTCCGTGATCATCATGTTGGCCCCGCCTCCCGGCGATGCCTAC AACTTCCTTGTGAACCTGATCTCGTACCCGCTGTCTATCGTCAACGTCTTCGTGTCCGGCGGTCTCATCTACATC TATCTGACCAAGGAGAAGAACTTCCCGGACTGGTCCCCCGGTATTCGGGCCACACTCCCCGTCACCATCTTCTTC TGCCTGTCCAACATGTACCTGGTGGTGGCGCCCTACGTGCCCCCCAGTGCCGGACAGAGCGTCTACAACAGCCTG CCTTACTACCTGCACTGTGTGGTGGCGCTGGGCATTTTCGCCCTCGGCGCTATTTACTATCTAGTCTGGGCGGTG CTGATGCCTCGCTTTGGTCGCTATATCCTTGTGAAGGAGTCGGTCGTGGATGCTGATGGCTGGTCCAGAAGTGTC TTTACAAAGATGCCGATTGAGCAGGCTGAGGCTTTGAGGCATGAAGGGCAGCAGCAGGGAGAGCACCATTTCTGA |
| Transcript | >Ani_SJS100_1|g9168.t1 ATGACGGACCCAGTTGTGGAATCTGCGTATCAAAAGGGCATCCTGCCCGACGCCAAGGCTGTCGAGGAAGGCCCT CGTCGAACGGATGGCGTTTCCGGTTTGTATGAAGGAAATGTCTTCGAGGCTACCCCGGATGACCGTCGCCAGATT GGCGTCATCAGTGCCTCCTTTCTGATCTTCAACCGTGTCATTGGTACTGGTATCTTCGCTACCCCGAGTACTATC CTGTCTTTGTCGGGTAGTGTTGGTCTGTCTCTGATCATGTGGGTCATTGGTACCTTGATTGCCATGGCTGGTACT GCTGTTTATCTGGAATGGGGTACTGCTATTCCTAAGAACGGTGGAGAAAAGAACTACCTCGAATATGTCTTCAAG AAGCCCAAGTTCCTGATGACGGCCATGTACGCGGCCTATGCAGTCCTGCTGGGTTGGGCCGCCAGTAACAGTGTC GTCTTTGGCGAGTATATTCTGAACGCGGCGGACATCGAAGTGGATCGCTGGAACCAGCGTGGTATTGGTTTGGCT TGTATCACCGCTGCCTTCCTCATCCATTCCTTCGCTGTCAAGTGGGGTCTCATGCTTCAGAACTTTCTGGGTGTG GTCAAGCTGGTCATCATCCTTTTCGTCATCGTCGCCGGATGGGTGGCTCTCGGCGGCCATATGAAGATCGATCCT CCTCACAACTTCACCAACGCGTTCGAGGGTACCACTGACACCGGCTATGGCATTGTCATGGCGTTGTATAATGTC ATCTGGTCCTTCATCGGGTACTCGAATGCCAACTACGCCTTGAGCGAGACGAAGAACCCTACCCGTACCCTGAAG ATCGCCGCCCCCATTGCCATCATCTCCGTCGGTATCATGTACATGCTGTGCAACATCGCATACTTTGCTGCTGTC CCGAAGGAGCAGTTCCTGTCCTCTGGCCAGACCGTCGCCGCCGCCTTCTTCGGCAACATGTTCGGTGCGCGCGCA GAGAAGGTGATGTCGGTCTTTGTGGCCCTGTCTGCATTTGGTAATGTTCTGTCGGTCATCTTCTCGCAAGGACGA ATTGTCCAAGCCCTCGGTCGCGAAGGAGTCCTCCCTCTGTCGAAGATCTGGGCCAGCAACCGGCCGTTCAACTCG CCCGCCGCTGGCCTCTTCGAGCACTGGGTAGTGTCCGTGATCATCATGTTGGCCCCGCCTCCCGGCGATGCCTAC AACTTCCTTGTGAACCTGATCTCGTACCCGCTGTCTATCGTCAACGTCTTCGTGTCCGGCGGTCTCATCTACATC TATCTGACCAAGGAGAAGAACTTCCCGGACTGGTCCCCCGGTATTCGGGCCACACTCCCCGTCACCATCTTCTTC TGCCTGTCCAACATGTACCTGGTGGTGGCGCCCTACGTGCCCCCCAGTGCCGGACAGAGCGTCTACAACAGCCTG CCTTACTACCTGCACTGTGTGGTGGCGCTGGGCATTTTCGCCCTCGGCGCTATTTACTATCTAGTCTGGGCGGTG CTGATGCCTCGCTTTGGTCGCTATATCCTTGTGAAGGAGTCGGTCGTGGATGCTGATGGCTGGTCCAGAAGTGTC TTTACAAAGATGCCGATTGAGCAGGCTGAGGCTTTGAGGCATGAAGGGCAGCAGCAGGGAGAGCACCATTTCTGA |
| Gene | >Ani_SJS100_1|g9168.t1 ATGACGGACCCAGTTGTGGAATCTGCGTATCAAAAGGGCATCCTGCCCGACGCCAAGGCTGTCGAGGAAGGCCCT CGTCGAACGGATGGCGTTTCCGGTTTGTGTATGTGTGACTGTCCCATCTCCTCCTAGGTCTCTCCCAAGGTTTCC CGGCATAGTGATGAAGAATCCGCCCTGACTGTTTCGAAACTAGATGAAGGAAATGTCTTCGAGGCTACCCCGGAT GACCGTCGCCAGATTGGCGTCATCAGTGCCTCCTTTCTGATCTTCAACCGTGTCATTGGTACTGGTATCTTCGCT ACCCCGAGTACTATCCTGTCTTTGTCGGGTAGTGTTGGTCTGTCTCTGATCATGTGGGTCATTGGTACCTTGATT GCCATGGCTGGTACTGCTGTTTATCTGGAATGGGGTACTGCTATTCCTAAGTATGCTTTATCCTGAACGGTTGGG GTAGGTAGAACTTGAGGCTAATGACTTCTCATAGGAACGGTGGAGAAAAGAACTACCTCGAATATGTCTTCAAGA AGCCCAAGTTCCTGATGACGGCCATGTACGCGGCCTATGCAGTCCTGCTGGGTTGGGCCGCCAGTAACAGTGTCG TCTTTGGCGAGTATATTCTGAACGCGGCGGACATCGAAGTGGATCGCTGGAACCAGCGTGGTATTGGTTTGGCTT GTATCACCGCTGCCTTCCTCATCCATTCCTTCGCTGTCAAGTGGGGTCTCATGCTTCAGAACTTTCTGGGTGTGG TCAAGCTGGTCATCATCCTTTTCGTCATCGTCGCCGGATGGGTGGCTCTCGGCGGCCATATGAAGATCGATCCTC CTCACAACTTCACCAACGCGTTCGAGGGTACCACTGACACCGGCTATGGCATTGTCATGGCGTTGTATAATGTCA TCTGGTCCTTCATCGGGTACTCGAATGCCAACTACGTATGTTGTTCTGACTGTGTACGTGGTCTGTGATAGGTTG CTAATATTGTTGTGTGCAGGCCTTGAGCGAGACGAAGAACCCTACCCGTACCCTGAAGATCGCCGCCCCCATTGC CATCATCTCCGTCGGTATCATGTACATGCTGTGCAACATCGCATACTTTGCTGCTGTCCCGAAGGAGCAGTTCCT GTCCTCTGGCCAGACCGTCGCCGCCGCCTTCTTCGGCAACATGTTCGGTGCGCGCGCAGAGAAGGTGATGTCGGT CTTTGTGGCCCTGTCTGCATTTGGTAATGTTCTGTCGGTCATCTTCTCGCAAGGACGAAGTACGTACATACCATT TCCCTTCCCTATATTGCGTCAAACGTTGAGCGAAGCTAATATTATGATAACAGTTGTCCAAGCCCTCGGTCGCGA AGGAGTCCTCCCTCTGTCGAAGATCTGGGCCAGCAACCGGCCGTTCAACTCGCCCGCCGCTGGCCTCTTCGAGCA CTGGGTAGTGTCCGTGATCATCATGTTGGCCCCGCCTCCCGGCGATGCCTACAACTTCCTTGTGAACCTGATCTC GTACCCGCTGTCTATCGTCAACGTCTTCGTGTCCGGCGGTCTCATCTACATCTATCTGACCAAGGAGAAGAACTT CCCGGACTGGTCCCCCGGTATTCGGGCCACACTCCCCGTCACCATCTTCTTCTGCCTGTCCAACATGTACCTGGT GGTGGCGCCCTACGTGCCCCCCAGTGCCGGACAGAGCGTCTACAACAGCCTGCCTTACTACCTGCACTGTGTGGT GGCGCTGGGCATTTTCGCCCTCGGCGCTATTTACTATCTAGTCTGGGCGGTGCTGATGCCTCGCTTTGGTCGCTA TATCCTTGTGAAGGAGTCGGTCGTGGATGCTGATGGCTGGTCCAGAAGTGTCTTTACAAAGATGCCGATTGAGCA GGCTGAGGCTTTGAGGCATGAAGGGCAGCAGCAGGGAGAGCACCATTTCTGA |