Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g9148.t1
Gene name
Locationscaffold_079:96192..96623
Strand+
Gene length (bp)431
Transcript length (bp)255
Coding sequence length (bp)255
Protein length (aa) 85

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 9.0E-23 6 78

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g9148.t1
MSQTFTPADVSTHNNPDKGMYIIIDNSVYDVTKFVDEHPGGAKILKRVAGKDASKQFWKYHNEGVLKKYTPKLKI
GEVKEAAKL*
Coding >Ani_SJS100_1|g9148.t1
ATGTCCCAAACATTCACCCCCGCCGACGTATCCACCCACAACAATCCCGACAAGGGAATGTACATCATCATCGAC
AACAGCGTCTACGACGTCACCAAGTTCGTCGATGAGCATCCTGGTGGCGCGAAGATTCTGAAAAGAGTAGCGGGA
AAGGATGCCTCGAAACAGTTTTGGAAGTATCACAATGAAGGCGTGCTGAAGAAATATACGCCCAAGTTGAAGATT
GGGGAGGTCAAGGAGGCGGCGAAGTTGTGA
Transcript >Ani_SJS100_1|g9148.t1
ATGTCCCAAACATTCACCCCCGCCGACGTATCCACCCACAACAATCCCGACAAGGGAATGTACATCATCATCGAC
AACAGCGTCTACGACGTCACCAAGTTCGTCGATGAGCATCCTGGTGGCGCGAAGATTCTGAAAAGAGTAGCGGGA
AAGGATGCCTCGAAACAGTTTTGGAAGTATCACAATGAAGGCGTGCTGAAGAAATATACGCCCAAGTTGAAGATT
GGGGAGGTCAAGGAGGCGGCGAAGTTGTGA
Gene >Ani_SJS100_1|g9148.t1
ATGTCCCAAACATTCACCCCCGCCGACGTATCCACCCACAACAATCCCGACAAGGGAATGTACATCATCATCGAC
AACAGCGTCTACGACGTCACCAAGTTCGTCGATGAGCATCCTGGTGGCGCGAAGATTCTGAAAAGAGTAGCGGGA
AAGGATGCCTCGAAACAGTTTTGGAAGGTGGGTGTTGCTTTAATCCCGTTTGTGTCTTTACTATCATGATTATTA
TATGCACCTTATGTACCTAGCTCATCTGGCTATGCGGTTATCTTTCTATTGTTGTTTTTCATATAGCGACCTTGT
TTGATGGTATGGTGCATTATAATGCTAACTACTTTGTCTTACTCTTCTTCTAGTATCACAATGAAGGCGTGCTGA
AGAAATATACGCCCAAGTTGAAGATTGGGGAGGTCAAGGAGGCGGCGAAGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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