© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9085.t1 |
| Gene name | |
| Location | scaffold_078:50862..52013 |
| Strand | - |
| Gene length (bp) | 1151 |
| Transcript length (bp) | 1017 |
| Coding sequence length (bp) | 1017 |
| Protein length (aa) | 339 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00153 | Mito_carr | Mitochondrial carrier protein | 9.2E-13 | 9 | 91 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 1.8E-05 | 104 | 200 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 3.0E-20 | 233 | 328 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9085.t1 MYNTKTDIWLSGAFAVLIVDFLVYPIDTLKTRIQSPNYNRIYKDATTGAINRKLLFRGLYQGVGSVILATLPASG AFFTTYEGLKHTLTTNPTTQSLLPVPIIHSLSSCTAESVSCFILTPAEVIKQNAQVYTNPNPQPSPNDPTKNPPS RTTNITLLTLRKFRHRPTSLWSGYTALLGRNLPFTGLNFPVFEYLRGHLSGYLLRRRDGGGGGNGDGDVLGQFGA VQRALITGVSAAVAGTVSSVVTTPVDVVKTRMMLGAGSSTTNGSGDGDEKKKGGASVWAVGKKVYREEGVRGLFK GGAIRSVWTAISFGVYLCVYEGGRGFLENRRKEKEMSS* |
| Coding | >Ani_SJS100_1|g9085.t1 ATGTACAATACCAAGACCGACATCTGGCTGTCCGGCGCCTTCGCCGTCCTAATAGTCGACTTCCTCGTCTACCCC ATCGACACGCTCAAAACCCGCATCCAATCTCCCAATTACAATAGAATATACAAGGATGCTACGACAGGGGCAATT AACCGTAAACTTCTCTTCCGGGGACTATATCAGGGCGTAGGGAGCGTCATTCTCGCTACATTACCTGCTTCAGGA GCATTCTTCACAACCTACGAAGGCCTAAAACACACCCTCACCACCAACCCCACCACACAATCCCTCCTCCCCGTA CCAATAATCCACTCCCTCTCCTCCTGCACCGCCGAATCCGTCTCCTGCTTCATCCTTACCCCCGCGGAGGTAATA AAGCAGAATGCACAGGTCTATACTAACCCCAACCCCCAACCCAGCCCCAATGACCCAACCAAAAACCCACCAAGT AGAACAACAAACATAACCCTCCTCACGCTTCGCAAATTCCGCCATCGGCCAACTTCCCTCTGGAGCGGATACACT GCTCTCTTGGGACGGAATCTCCCTTTCACGGGGTTGAACTTTCCGGTGTTTGAGTATCTGAGGGGGCATTTGTCG GGGTATTTACTTCGTCGGAGGGATGGAGGAGGAGGAGGGAATGGGGATGGGGATGTGCTGGGACAGTTTGGGGCT GTGCAGAGGGCTCTTATTACGGGGGTTTCTGCGGCTGTGGCGGGGACGGTTTCGTCTGTTGTGACGACGCCGGTG GATGTGGTTAAGACGAGGATGATGTTGGGGGCTGGTAGTTCTACTACTAATGGGAGTGGGGATGGGGATGAGAAG AAGAAGGGAGGGGCAAGTGTGTGGGCTGTGGGAAAGAAGGTGTATAGAGAGGAAGGGGTTAGAGGGCTCTTCAAG GGAGGGGCGATACGGTCTGTGTGGACGGCTATTTCGTTTGGGGTGTATCTTTGTGTGTATGAGGGTGGGAGAGGG TTTTTGGAGAATAGACGGAAGGAGAAGGAGATGTCATCTTAA |
| Transcript | >Ani_SJS100_1|g9085.t1 ATGTACAATACCAAGACCGACATCTGGCTGTCCGGCGCCTTCGCCGTCCTAATAGTCGACTTCCTCGTCTACCCC ATCGACACGCTCAAAACCCGCATCCAATCTCCCAATTACAATAGAATATACAAGGATGCTACGACAGGGGCAATT AACCGTAAACTTCTCTTCCGGGGACTATATCAGGGCGTAGGGAGCGTCATTCTCGCTACATTACCTGCTTCAGGA GCATTCTTCACAACCTACGAAGGCCTAAAACACACCCTCACCACCAACCCCACCACACAATCCCTCCTCCCCGTA CCAATAATCCACTCCCTCTCCTCCTGCACCGCCGAATCCGTCTCCTGCTTCATCCTTACCCCCGCGGAGGTAATA AAGCAGAATGCACAGGTCTATACTAACCCCAACCCCCAACCCAGCCCCAATGACCCAACCAAAAACCCACCAAGT AGAACAACAAACATAACCCTCCTCACGCTTCGCAAATTCCGCCATCGGCCAACTTCCCTCTGGAGCGGATACACT GCTCTCTTGGGACGGAATCTCCCTTTCACGGGGTTGAACTTTCCGGTGTTTGAGTATCTGAGGGGGCATTTGTCG GGGTATTTACTTCGTCGGAGGGATGGAGGAGGAGGAGGGAATGGGGATGGGGATGTGCTGGGACAGTTTGGGGCT GTGCAGAGGGCTCTTATTACGGGGGTTTCTGCGGCTGTGGCGGGGACGGTTTCGTCTGTTGTGACGACGCCGGTG GATGTGGTTAAGACGAGGATGATGTTGGGGGCTGGTAGTTCTACTACTAATGGGAGTGGGGATGGGGATGAGAAG AAGAAGGGAGGGGCAAGTGTGTGGGCTGTGGGAAAGAAGGTGTATAGAGAGGAAGGGGTTAGAGGGCTCTTCAAG GGAGGGGCGATACGGTCTGTGTGGACGGCTATTTCGTTTGGGGTGTATCTTTGTGTGTATGAGGGTGGGAGAGGG TTTTTGGAGAATAGACGGAAGGAGAAGGAGATGTCATCTTAA |
| Gene | >Ani_SJS100_1|g9085.t1 ATGTACAATACCAAGACCGACATCTGGCTGGTAAGCCCCTGCAATTCACATAAGAAATACAAAAAGAAACTAAAA GAGAAGCACAGTCCGGCGCCTTCGCCGTCCTAATAGTCGACTTCCTCGTCTACCCCATCGACACGCTCAAAACCC GCATCCAATCTCCCAATTACAATAGAATATACAAGGATGCTACGACAGGGGCAATTAACCGTAAACTTCTCTTCC GGGGACTATATCAGGGCGTAGGGAGCGTCATTCTCGCTACATTACCTGCTTGTATGTCCCCAGACCCAACATACA CCCCAAACTCATCCATATTGAATAGTATCCTTGACATTGACATAAACAAAATAGCAGGAGCATTCTTCACAACCT ACGAAGGCCTAAAACACACCCTCACCACCAACCCCACCACACAATCCCTCCTCCCCGTACCAATAATCCACTCCC TCTCCTCCTGCACCGCCGAATCCGTCTCCTGCTTCATCCTTACCCCCGCGGAGGTAATAAAGCAGAATGCACAGG TCTATACTAACCCCAACCCCCAACCCAGCCCCAATGACCCAACCAAAAACCCACCAAGTAGAACAACAAACATAA CCCTCCTCACGCTTCGCAAATTCCGCCATCGGCCAACTTCCCTCTGGAGCGGATACACTGCTCTCTTGGGACGGA ATCTCCCTTTCACGGGGTTGAACTTTCCGGTGTTTGAGTATCTGAGGGGGCATTTGTCGGGGTATTTACTTCGTC GGAGGGATGGAGGAGGAGGAGGGAATGGGGATGGGGATGTGCTGGGACAGTTTGGGGCTGTGCAGAGGGCTCTTA TTACGGGGGTTTCTGCGGCTGTGGCGGGGACGGTTTCGTCTGTTGTGACGACGCCGGTGGATGTGGTTAAGACGA GGATGATGTTGGGGGCTGGTAGTTCTACTACTAATGGGAGTGGGGATGGGGATGAGAAGAAGAAGGGAGGGGCAA GTGTGTGGGCTGTGGGAAAGAAGGTGTATAGAGAGGAAGGGGTTAGAGGGCTCTTCAAGGGAGGGGCGATACGGT CTGTGTGGACGGCTATTTCGTTTGGGGTGTATCTTTGTGTGTATGAGGGTGGGAGAGGGTTTTTGGAGAATAGAC GGAAGGAGAAGGAGATGTCATCTTAA |