Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g9083.t1
Gene name
Location	scaffold_078:39777..40857
Strand	+
Gene length (bp)	1080
Transcript length (bp)	963
Coding sequence length (bp)	963
Protein length (aa)	321

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09011	HMG_box_2	HMG-box domain	1.4E-06	138	205
PF00505	HMG_box	HMG (high mobility group) box	4.2E-06	138	205

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
HMG

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g9083.t1 MPLNLVRCGGGVLQHLQLSEAFSRPVRQAISQSHVRRMSLAALSRFSTPNVRYAPLSAALSGHLTSSYATAASPK GRAGTKSSSTKTTKSTKSTKTTKKPRAKKELTEEQKAAKKEAKEKSDLRQLVKQLKAASLTPPKRLTNHFTLTML SKLEEVKKEGKGLKGKEAFKEAAERAKNISEAEREQFVATAATNKEAYEKEYKEWLDSHSPLEIKQANDARRRLA QIQNKKFFPLHDPRLVKRSKIAYLFYAEERHQAGDLKYMPIPERGVRIAEEWRGMTAAEKQKYVRLQEVDAERYA REYKVVYGEDPPYVGKNATK*
Coding	>Ani_SJS100_1\|g9083.t1 ATGCCTTTGAACCTAGTTCGGTGCGGAGGGGGTGTCCTCCAACACCTCCAGCTTAGCGAGGCCTTCTCTCGTCCG GTCCGCCAGGCCATCTCCCAGAGCCATGTTAGGCGCATGTCCCTCGCCGCTCTGAGTCGCTTCTCGACCCCCAAT GTCAGATATGCGCCTCTTTCCGCTGCACTCTCCGGACACCTGACCAGCAGCTATGCGACTGCGGCTTCCCCCAAG GGGCGCGCCGGCACCAAATCCTCTTCCACCAAGACGACGAAGTCTACCAAGTCCACCAAGACTACCAAGAAGCCT CGGGCAAAGAAGGAACTTACTGAAGAGCAGAAGGCGGCCAAGAAGGAAGCTAAGGAGAAGAGCGACCTGAGGCAG CTTGTTAAGCAGCTGAAGGCCGCCTCCCTTACGCCGCCCAAGAGGCTCACCAACCACTTCACCCTGACCATGCTC AGCAAGCTTGAAGAGGTCAAGAAGGAAGGAAAGGGATTGAAGGGCAAGGAGGCATTCAAGGAGGCCGCCGAACGT GCCAAGAACATTAGTGAAGCCGAGCGCGAGCAATTTGTCGCTACTGCTGCTACCAACAAGGAAGCCTACGAGAAG GAATACAAGGAGTGGCTCGACTCGCACAGTCCCCTGGAGATCAAGCAAGCCAATGACGCCAGGCGAAGACTTGCC CAGATTCAGAACAAGAAGTTCTTCCCTCTTCATGACCCTCGCCTGGTCAAGCGCTCTAAGATCGCGTATCTATTT TACGCCGAGGAACGCCATCAGGCTGGCGACCTAAAGTACATGCCCATCCCCGAACGTGGTGTGCGAATTGCGGAA GAATGGCGAGGCATGACCGCTGCAGAGAAACAGAAATACGTGCGACTTCAAGAAGTTGATGCCGAACGGTACGCC CGGGAATACAAGGTCGTCTATGGCGAGGATCCCCCCTATGTGGGAAAGAACGCGACGAAATGA
Transcript	>Ani_SJS100_1\|g9083.t1 ATGCCTTTGAACCTAGTTCGGTGCGGAGGGGGTGTCCTCCAACACCTCCAGCTTAGCGAGGCCTTCTCTCGTCCG GTCCGCCAGGCCATCTCCCAGAGCCATGTTAGGCGCATGTCCCTCGCCGCTCTGAGTCGCTTCTCGACCCCCAAT GTCAGATATGCGCCTCTTTCCGCTGCACTCTCCGGACACCTGACCAGCAGCTATGCGACTGCGGCTTCCCCCAAG GGGCGCGCCGGCACCAAATCCTCTTCCACCAAGACGACGAAGTCTACCAAGTCCACCAAGACTACCAAGAAGCCT CGGGCAAAGAAGGAACTTACTGAAGAGCAGAAGGCGGCCAAGAAGGAAGCTAAGGAGAAGAGCGACCTGAGGCAG CTTGTTAAGCAGCTGAAGGCCGCCTCCCTTACGCCGCCCAAGAGGCTCACCAACCACTTCACCCTGACCATGCTC AGCAAGCTTGAAGAGGTCAAGAAGGAAGGAAAGGGATTGAAGGGCAAGGAGGCATTCAAGGAGGCCGCCGAACGT GCCAAGAACATTAGTGAAGCCGAGCGCGAGCAATTTGTCGCTACTGCTGCTACCAACAAGGAAGCCTACGAGAAG GAATACAAGGAGTGGCTCGACTCGCACAGTCCCCTGGAGATCAAGCAAGCCAATGACGCCAGGCGAAGACTTGCC CAGATTCAGAACAAGAAGTTCTTCCCTCTTCATGACCCTCGCCTGGTCAAGCGCTCTAAGATCGCGTATCTATTT TACGCCGAGGAACGCCATCAGGCTGGCGACCTAAAGTACATGCCCATCCCCGAACGTGGTGTGCGAATTGCGGAA GAATGGCGAGGCATGACCGCTGCAGAGAAACAGAAATACGTGCGACTTCAAGAAGTTGATGCCGAACGGTACGCC CGGGAATACAAGGTCGTCTATGGCGAGGATCCCCCCTATGTGGGAAAGAACGCGACGAAATGA
Gene	>Ani_SJS100_1\|g9083.t1 ATGCCTTTGAACCTAGTTCGGTGCGGAGGGGGTGTCCTCCAACACCTCCAGCTTAGCGAGGCCTTCTCTCGTCCG GTCCGCCAGGCCATCTCCCAGAGCCATGTTAGGCGCATGTCCCTCGCCGCTCTGAGTCGCTTCTCGACCCCCAAT GTCAGATATGCGCCTCTTTCCGCTGCACTCTCCGGACACCTGACCAGCAGCTATGCGACTGCGGCTTCCCCCAAG GGGCGCGCCGGCACCAAATCCTCTTCCACCAAGACGACGAAGTCTACCAAGTCCACCAAGACTACCAAGAAGCCT CGGGCAAAGAAGGAACTTACTGAAGAGCAGAAGGCGGCCAAGAAGGAAGCTAAGGAGAAGAGCGACCTGAGGCAG CTTGTTAAGCAGCTGAAGGCCGCCTCCCTTACGCCGCCCAAGAGGCTCACCAACCACTTCACCCTGACCATGCTC AGCAAGCTTGAAGAGGTCAAGAAGGAAGGAAAGGGATTGAAGGGCAAGGAGGCATTCAAGGAGGCCGCCGAACGT GCCAAGAACATTAGTGAAGCCGAGCGCGAGGTTCATTGTTCCCTTCCAGAGACATGAGACGTTCCATGATACTGA CGTCTGCTTACAGCAATTTGTCGCTACTGCTGCTACCAACAAGGAAGCCTACGAGAAGGAATACAAGGAGTGGCT CGACTCGCACAGTCCCCTGGAGATCAAGCAAGCCAATGACGCCAGGCGAAGACTTGCCCAGATTCAGAACAAGAA GTTCTTCCCTCTTCATGACCCTCGCCTGGTCAAGCGCTCTAAGATCGCGTATCTATTTTACGCCGAGGAACGCCA TCAGGCTGGCGACCTAAAGTACATGCCCATCCCCGAACGTGGTGTGCGAATTGCGGAAGAATGGCGAGGCATGAC CGCTGCAGAGAAACAGGTATGCACGATGCGCCTCTCTCGGACTGTTGTCAGAAGGAATGCTAATGCAGCGAGCAG AAATACGTGCGACTTCAAGAAGTTGATGCCGAACGGTACGCCCGGGAATACAAGGTCGTCTATGGCGAGGATCCC CCCTATGTGGGAAAGAACGCGACGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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