Protein ID | Ani_SJS100_1|g9069.t1 |
Gene name | |
Location | scaffold_078:7603..9160 |
Strand | + |
Gene length (bp) | 1557 |
Transcript length (bp) | 1557 |
Coding sequence length (bp) | 1557 |
Protein length (aa) | 519 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01798 | Nop | snoRNA binding domain, fibrillarin | 1.2E-63 | 52 | 287 |
PF09785 | Prp31_C | Prp31 C terminal domain | 2.2E-48 | 295 | 450 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 39 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g9069.t1 MSNAEELLRDFEEDDEDLQAGDGLEEEAVDEEQLAQAPEVTNEFDVALSTADELTRLHKVLRDHYSIRFPELETL VTTPIDYAKTVAILKNGPLNDIKALSTSSDNMVGVPLRSILDGPSLMVVAVEGTTTRGREMTEAELKTVMDTCER ILKLDRERTALTESIQSRMSQIAPNLAALIGPETAAQFLNQTGGLLELAKIPACNLAAQGSKRSEGLGFATNIGI RSQGFLYNSPIIQGVPNDLKRQAIRIVSAKMVLATRADVSKYSPDGSLGEELKQQCFQRLEKLTEPAPNSGVKAL PAPDDKPSRKRGGRRARKAKEAVAMTELRKAQNRVAFGREEAEVGYGTGEGTVGLGMLGQQNDGRIRATQIDQRT RAKLSKNNKGWGTATPVSGTSTSLRAFGSNASGTASVLQAKGLRTSGVGTSLGGSAGTASTIAFTPVQGLELVDP KVQAELSRKRKAEEDRWFKSGTFTQVGGQSSTAPQGGNGGFKVPALPPKKKVDTGEGRMAPPPPPVKQ* |
Coding | >Ani_SJS100_1|g9069.t1 ATGTCAAATGCGGAGGAGCTTTTGAGGGATTTCGAGGAGGACGACGAGGATCTTCAGGCTGGCGATGGCCTCGAA GAGGAAGCTGTCGATGAGGAGCAGCTGGCACAAGCTCCTGAGGTTACTAACGAGTTTGACGTCGCCTTGTCGACC GCCGACGAACTGACCCGTCTACACAAAGTGCTGCGCGATCACTACTCTATACGGTTTCCTGAGCTCGAGACGCTC GTGACTACTCCGATCGACTATGCGAAAACTGTCGCTATCCTAAAAAATGGCCCGCTCAACGATATTAAAGCTCTG TCAACCTCGTCAGATAACATGGTTGGCGTGCCACTGAGGTCAATTTTGGATGGGCCATCCCTGATGGTTGTGGCC GTGGAGGGTACCACCACTCGAGGCCGGGAGATGACCGAGGCCGAACTCAAGACCGTGATGGATACATGCGAACGG ATTCTCAAGCTCGATCGCGAACGGACGGCGCTTACAGAGAGCATTCAGTCCCGGATGAGCCAGATCGCTCCCAAC TTGGCGGCCTTGATTGGACCGGAGACAGCGGCTCAGTTCTTGAACCAGACCGGAGGTCTGCTCGAGCTAGCGAAG ATTCCTGCGTGCAACCTAGCTGCACAGGGCTCGAAGCGATCGGAAGGACTGGGATTCGCTACAAATATTGGTATT CGGTCTCAGGGGTTCCTCTACAACTCGCCAATTATACAAGGTGTCCCGAACGATCTCAAGCGGCAGGCCATTCGC ATCGTCTCCGCCAAGATGGTCCTTGCTACGCGAGCAGATGTATCCAAGTACAGTCCTGACGGATCTTTGGGTGAA GAACTGAAGCAGCAGTGTTTCCAGCGTCTGGAGAAACTTACGGAACCCGCGCCGAACTCGGGCGTAAAGGCGCTC CCCGCTCCGGACGACAAGCCGTCCCGTAAGCGAGGTGGACGACGGGCGAGAAAGGCCAAGGAAGCTGTCGCCATG ACGGAACTTCGTAAGGCCCAGAACCGGGTTGCCTTTGGTAGGGAGGAAGCAGAAGTTGGATATGGCACCGGAGAG GGAACGGTCGGACTGGGCATGCTTGGCCAACAAAACGATGGACGGATCCGCGCGACTCAGATCGACCAGAGAACC CGGGCGAAGCTTAGTAAGAACAACAAGGGATGGGGTACCGCAACTCCCGTCAGTGGTACCTCTACATCTCTCCGT GCATTCGGCTCCAATGCTAGTGGGACAGCCAGTGTGCTTCAGGCGAAGGGGCTGCGAACCTCTGGAGTTGGCACC TCGCTGGGAGGATCAGCCGGTACTGCCAGTACCATTGCCTTCACGCCTGTGCAAGGGTTAGAGCTGGTGGACCCT AAGGTGCAAGCGGAATTGAGTCGGAAACGCAAGGCCGAGGAGGATCGGTGGTTCAAGTCTGGCACATTCACGCAG GTTGGTGGCCAGAGCAGCACGGCGCCTCAAGGGGGGAATGGAGGCTTCAAGGTTCCGGCATTGCCTCCGAAGAAG AAGGTCGATACCGGCGAGGGCAGAATGGCACCGCCACCGCCGCCGGTGAAGCAGTAA |
Transcript | >Ani_SJS100_1|g9069.t1 ATGTCAAATGCGGAGGAGCTTTTGAGGGATTTCGAGGAGGACGACGAGGATCTTCAGGCTGGCGATGGCCTCGAA GAGGAAGCTGTCGATGAGGAGCAGCTGGCACAAGCTCCTGAGGTTACTAACGAGTTTGACGTCGCCTTGTCGACC GCCGACGAACTGACCCGTCTACACAAAGTGCTGCGCGATCACTACTCTATACGGTTTCCTGAGCTCGAGACGCTC GTGACTACTCCGATCGACTATGCGAAAACTGTCGCTATCCTAAAAAATGGCCCGCTCAACGATATTAAAGCTCTG TCAACCTCGTCAGATAACATGGTTGGCGTGCCACTGAGGTCAATTTTGGATGGGCCATCCCTGATGGTTGTGGCC GTGGAGGGTACCACCACTCGAGGCCGGGAGATGACCGAGGCCGAACTCAAGACCGTGATGGATACATGCGAACGG ATTCTCAAGCTCGATCGCGAACGGACGGCGCTTACAGAGAGCATTCAGTCCCGGATGAGCCAGATCGCTCCCAAC TTGGCGGCCTTGATTGGACCGGAGACAGCGGCTCAGTTCTTGAACCAGACCGGAGGTCTGCTCGAGCTAGCGAAG ATTCCTGCGTGCAACCTAGCTGCACAGGGCTCGAAGCGATCGGAAGGACTGGGATTCGCTACAAATATTGGTATT CGGTCTCAGGGGTTCCTCTACAACTCGCCAATTATACAAGGTGTCCCGAACGATCTCAAGCGGCAGGCCATTCGC ATCGTCTCCGCCAAGATGGTCCTTGCTACGCGAGCAGATGTATCCAAGTACAGTCCTGACGGATCTTTGGGTGAA GAACTGAAGCAGCAGTGTTTCCAGCGTCTGGAGAAACTTACGGAACCCGCGCCGAACTCGGGCGTAAAGGCGCTC CCCGCTCCGGACGACAAGCCGTCCCGTAAGCGAGGTGGACGACGGGCGAGAAAGGCCAAGGAAGCTGTCGCCATG ACGGAACTTCGTAAGGCCCAGAACCGGGTTGCCTTTGGTAGGGAGGAAGCAGAAGTTGGATATGGCACCGGAGAG GGAACGGTCGGACTGGGCATGCTTGGCCAACAAAACGATGGACGGATCCGCGCGACTCAGATCGACCAGAGAACC CGGGCGAAGCTTAGTAAGAACAACAAGGGATGGGGTACCGCAACTCCCGTCAGTGGTACCTCTACATCTCTCCGT GCATTCGGCTCCAATGCTAGTGGGACAGCCAGTGTGCTTCAGGCGAAGGGGCTGCGAACCTCTGGAGTTGGCACC TCGCTGGGAGGATCAGCCGGTACTGCCAGTACCATTGCCTTCACGCCTGTGCAAGGGTTAGAGCTGGTGGACCCT AAGGTGCAAGCGGAATTGAGTCGGAAACGCAAGGCCGAGGAGGATCGGTGGTTCAAGTCTGGCACATTCACGCAG GTTGGTGGCCAGAGCAGCACGGCGCCTCAAGGGGGGAATGGAGGCTTCAAGGTTCCGGCATTGCCTCCGAAGAAG AAGGTCGATACCGGCGAGGGCAGAATGGCACCGCCACCGCCGCCGGTGAAGCAGTAA |
Gene | >Ani_SJS100_1|g9069.t1 ATGTCAAATGCGGAGGAGCTTTTGAGGGATTTCGAGGAGGACGACGAGGATCTTCAGGCTGGCGATGGCCTCGAA GAGGAAGCTGTCGATGAGGAGCAGCTGGCACAAGCTCCTGAGGTTACTAACGAGTTTGACGTCGCCTTGTCGACC GCCGACGAACTGACCCGTCTACACAAAGTGCTGCGCGATCACTACTCTATACGGTTTCCTGAGCTCGAGACGCTC GTGACTACTCCGATCGACTATGCGAAAACTGTCGCTATCCTAAAAAATGGCCCGCTCAACGATATTAAAGCTCTG TCAACCTCGTCAGATAACATGGTTGGCGTGCCACTGAGGTCAATTTTGGATGGGCCATCCCTGATGGTTGTGGCC GTGGAGGGTACCACCACTCGAGGCCGGGAGATGACCGAGGCCGAACTCAAGACCGTGATGGATACATGCGAACGG ATTCTCAAGCTCGATCGCGAACGGACGGCGCTTACAGAGAGCATTCAGTCCCGGATGAGCCAGATCGCTCCCAAC TTGGCGGCCTTGATTGGACCGGAGACAGCGGCTCAGTTCTTGAACCAGACCGGAGGTCTGCTCGAGCTAGCGAAG ATTCCTGCGTGCAACCTAGCTGCACAGGGCTCGAAGCGATCGGAAGGACTGGGATTCGCTACAAATATTGGTATT CGGTCTCAGGGGTTCCTCTACAACTCGCCAATTATACAAGGTGTCCCGAACGATCTCAAGCGGCAGGCCATTCGC ATCGTCTCCGCCAAGATGGTCCTTGCTACGCGAGCAGATGTATCCAAGTACAGTCCTGACGGATCTTTGGGTGAA GAACTGAAGCAGCAGTGTTTCCAGCGTCTGGAGAAACTTACGGAACCCGCGCCGAACTCGGGCGTAAAGGCGCTC CCCGCTCCGGACGACAAGCCGTCCCGTAAGCGAGGTGGACGACGGGCGAGAAAGGCCAAGGAAGCTGTCGCCATG ACGGAACTTCGTAAGGCCCAGAACCGGGTTGCCTTTGGTAGGGAGGAAGCAGAAGTTGGATATGGCACCGGAGAG GGAACGGTCGGACTGGGCATGCTTGGCCAACAAAACGATGGACGGATCCGCGCGACTCAGATCGACCAGAGAACC CGGGCGAAGCTTAGTAAGAACAACAAGGGATGGGGTACCGCAACTCCCGTCAGTGGTACCTCTACATCTCTCCGT GCATTCGGCTCCAATGCTAGTGGGACAGCCAGTGTGCTTCAGGCGAAGGGGCTGCGAACCTCTGGAGTTGGCACC TCGCTGGGAGGATCAGCCGGTACTGCCAGTACCATTGCCTTCACGCCTGTGCAAGGGTTAGAGCTGGTGGACCCT AAGGTGCAAGCGGAATTGAGTCGGAAACGCAAGGCCGAGGAGGATCGGTGGTTCAAGTCTGGCACATTCACGCAG GTTGGTGGCCAGAGCAGCACGGCGCCTCAAGGGGGGAATGGAGGCTTCAAGGTTCCGGCATTGCCTCCGAAGAAG AAGGTCGATACCGGCGAGGGCAGAATGGCACCGCCACCGCCGCCGGTGAAGCAGTAA |