© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g9025.t1 |
| Gene name | |
| Location | scaffold_077:9647..10262 |
| Strand | + |
| Gene length (bp) | 615 |
| Transcript length (bp) | 615 |
| Coding sequence length (bp) | 615 |
| Protein length (aa) | 205 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02441 | Flavoprotein | Flavoprotein | 6.9E-24 | 19 | 180 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 39 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g9025.t1 MPIDNDHVAVARPAPRRRRIVVAMTGATGAMLGIKVLIALRRLNVETHLVMSKWAEATIKYETDYHPSNVRALAD YVHNINDMAAPVSSGSFRADGMIVVPCSMKTLAAIHSGFCDDLISRTADVMLKERRRLVLVARETPLSEIHLRNM LEVTRAGAVIFPPVPAFYIKAGSIEDLIDQSVGRMLDLFDLDTGDFERWNGWEK* |
| Coding | >Ani_SJS100_1|g9025.t1 ATGCCCATCGATAATGATCACGTGGCCGTTGCCCGTCCAGCTCCCCGCCGCCGCCGCATTGTAGTAGCCATGACG GGTGCCACTGGAGCCATGCTCGGCATCAAAGTCCTAATTGCTCTGCGCCGTCTAAATGTGGAGACACACCTGGTG ATGAGTAAATGGGCGGAGGCTACGATCAAATACGAGACTGACTACCATCCCTCAAACGTGCGAGCGCTGGCCGAC TACGTGCACAACATCAATGACATGGCCGCCCCAGTATCCAGCGGCTCATTCCGCGCGGACGGAATGATTGTGGTA CCGTGCAGCATGAAAACATTGGCTGCTATCCACTCGGGCTTTTGCGACGATCTCATTTCAAGGACAGCAGATGTG ATGCTCAAGGAGCGCAGGCGGTTGGTGCTAGTAGCGCGGGAGACGCCATTGAGCGAGATCCATCTGCGAAACATG TTGGAGGTTACACGCGCTGGGGCAGTCATCTTCCCCCCAGTACCGGCGTTCTACATCAAGGCCGGAAGTATCGAG GACCTCATCGACCAGAGTGTTGGACGAATGTTGGATTTATTTGACCTCGACACGGGGGATTTTGAACGTTGGAAT GGATGGGAAAAATAA |
| Transcript | >Ani_SJS100_1|g9025.t1 ATGCCCATCGATAATGATCACGTGGCCGTTGCCCGTCCAGCTCCCCGCCGCCGCCGCATTGTAGTAGCCATGACG GGTGCCACTGGAGCCATGCTCGGCATCAAAGTCCTAATTGCTCTGCGCCGTCTAAATGTGGAGACACACCTGGTG ATGAGTAAATGGGCGGAGGCTACGATCAAATACGAGACTGACTACCATCCCTCAAACGTGCGAGCGCTGGCCGAC TACGTGCACAACATCAATGACATGGCCGCCCCAGTATCCAGCGGCTCATTCCGCGCGGACGGAATGATTGTGGTA CCGTGCAGCATGAAAACATTGGCTGCTATCCACTCGGGCTTTTGCGACGATCTCATTTCAAGGACAGCAGATGTG ATGCTCAAGGAGCGCAGGCGGTTGGTGCTAGTAGCGCGGGAGACGCCATTGAGCGAGATCCATCTGCGAAACATG TTGGAGGTTACACGCGCTGGGGCAGTCATCTTCCCCCCAGTACCGGCGTTCTACATCAAGGCCGGAAGTATCGAG GACCTCATCGACCAGAGTGTTGGACGAATGTTGGATTTATTTGACCTCGACACGGGGGATTTTGAACGTTGGAAT GGATGGGAAAAATAA |
| Gene | >Ani_SJS100_1|g9025.t1 ATGCCCATCGATAATGATCACGTGGCCGTTGCCCGTCCAGCTCCCCGCCGCCGCCGCATTGTAGTAGCCATGACG GGTGCCACTGGAGCCATGCTCGGCATCAAAGTCCTAATTGCTCTGCGCCGTCTAAATGTGGAGACACACCTGGTG ATGAGTAAATGGGCGGAGGCTACGATCAAATACGAGACTGACTACCATCCCTCAAACGTGCGAGCGCTGGCCGAC TACGTGCACAACATCAATGACATGGCCGCCCCAGTATCCAGCGGCTCATTCCGCGCGGACGGAATGATTGTGGTA CCGTGCAGCATGAAAACATTGGCTGCTATCCACTCGGGCTTTTGCGACGATCTCATTTCAAGGACAGCAGATGTG ATGCTCAAGGAGCGCAGGCGGTTGGTGCTAGTAGCGCGGGAGACGCCATTGAGCGAGATCCATCTGCGAAACATG TTGGAGGTTACACGCGCTGGGGCAGTCATCTTCCCCCCAGTACCGGCGTTCTACATCAAGGCCGGAAGTATCGAG GACCTCATCGACCAGAGTGTTGGACGAATGTTGGATTTATTTGACCTCGACACGGGGGATTTTGAACGTTGGAAT GGATGGGAAAAATAA |