Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g8982.t1
Gene name
Locationscaffold_076:32154..33006
Strand+
Gene length (bp)852
Transcript length (bp)852
Coding sequence length (bp)852
Protein length (aa) 284

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11790 Glyco_hydro_cc Glycosyl hydrolase catalytic core 1.9E-68 48 281

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g8982.t1
MVSFKSLLTATTLATAVLAIPHSGHGHGSHKHRSTHVASKRTSSSKRGAAYNSASSVHTLTSGSSGNGTVSWAYD
WNMYADGTLPSNVEYVPMLWGSKMFGGWLTAIETALDSGSNYIMGFNEPDSSSQASMTASEAASSYKNYITPYSG
KAKLVTPAVTSSTTEGEGLSWMKSFLSECSECDMSVLAVHWYGTSADEFKSFVQEAMQVADDNGLDETWVTEFAL
TSDESAGGDESSAADFLDEVLPWLDSQSGVGRYAYYMCADGYLLSGEELSSSGKVYVA*
Coding >Ani_SJS100_1|g8982.t1
ATGGTCTCCTTCAAGTCTCTTCTGACCGCCACCACCCTGGCCACCGCCGTTCTGGCCATCCCTCATAGTGGCCAT
GGCCATGGCAGCCACAAGCACCGTTCCACTCATGTCGCCTCCAAGCGGACCTCTTCCTCCAAGCGTGGCGCTGCC
TACAACTCTGCTTCCAGCGTTCACACGCTGACTTCCGGCTCCTCCGGCAACGGTACCGTCTCCTGGGCCTACGAC
TGGAACATGTACGCCGACGGCACCCTCCCCAGTAACGTCGAATACGTGCCCATGCTGTGGGGCAGCAAGATGTTT
GGAGGCTGGTTGACCGCCATCGAGACTGCCCTTGATAGCGGTAGCAATTACATCATGGGATTCAACGAGCCCGAC
TCCTCCTCCCAAGCCTCGATGACTGCTTCCGAGGCCGCCAGCTCCTACAAGAATTACATCACTCCTTACTCTGGC
AAGGCTAAGCTCGTCACCCCGGCCGTGACCAGTAGCACCACGGAAGGCGAGGGTCTCAGCTGGATGAAGTCCTTC
CTGTCCGAATGCAGCGAGTGTGACATGTCGGTGCTGGCAGTCCACTGGTACGGCACCTCGGCCGATGAGTTCAAG
TCCTTCGTGCAGGAGGCCATGCAGGTGGCGGACGACAACGGATTGGACGAGACCTGGGTGACAGAATTCGCCCTC
ACCAGCGACGAGTCGGCCGGCGGCGATGAGAGTTCAGCGGCGGACTTCCTTGACGAAGTTTTGCCGTGGTTGGAC
AGCCAGAGTGGCGTGGGACGGTATGCGTATTACATGTGTGCAGATGGGTATCTGCTCAGCGGGGAGGAGTTGAGC
TCGAGTGGAAAGGTCTACGTTGCATAG
Transcript >Ani_SJS100_1|g8982.t1
ATGGTCTCCTTCAAGTCTCTTCTGACCGCCACCACCCTGGCCACCGCCGTTCTGGCCATCCCTCATAGTGGCCAT
GGCCATGGCAGCCACAAGCACCGTTCCACTCATGTCGCCTCCAAGCGGACCTCTTCCTCCAAGCGTGGCGCTGCC
TACAACTCTGCTTCCAGCGTTCACACGCTGACTTCCGGCTCCTCCGGCAACGGTACCGTCTCCTGGGCCTACGAC
TGGAACATGTACGCCGACGGCACCCTCCCCAGTAACGTCGAATACGTGCCCATGCTGTGGGGCAGCAAGATGTTT
GGAGGCTGGTTGACCGCCATCGAGACTGCCCTTGATAGCGGTAGCAATTACATCATGGGATTCAACGAGCCCGAC
TCCTCCTCCCAAGCCTCGATGACTGCTTCCGAGGCCGCCAGCTCCTACAAGAATTACATCACTCCTTACTCTGGC
AAGGCTAAGCTCGTCACCCCGGCCGTGACCAGTAGCACCACGGAAGGCGAGGGTCTCAGCTGGATGAAGTCCTTC
CTGTCCGAATGCAGCGAGTGTGACATGTCGGTGCTGGCAGTCCACTGGTACGGCACCTCGGCCGATGAGTTCAAG
TCCTTCGTGCAGGAGGCCATGCAGGTGGCGGACGACAACGGATTGGACGAGACCTGGGTGACAGAATTCGCCCTC
ACCAGCGACGAGTCGGCCGGCGGCGATGAGAGTTCAGCGGCGGACTTCCTTGACGAAGTTTTGCCGTGGTTGGAC
AGCCAGAGTGGCGTGGGACGGTATGCGTATTACATGTGTGCAGATGGGTATCTGCTCAGCGGGGAGGAGTTGAGC
TCGAGTGGAAAGGTCTACGTTGCATAG
Gene >Ani_SJS100_1|g8982.t1
ATGGTCTCCTTCAAGTCTCTTCTGACCGCCACCACCCTGGCCACCGCCGTTCTGGCCATCCCTCATAGTGGCCAT
GGCCATGGCAGCCACAAGCACCGTTCCACTCATGTCGCCTCCAAGCGGACCTCTTCCTCCAAGCGTGGCGCTGCC
TACAACTCTGCTTCCAGCGTTCACACGCTGACTTCCGGCTCCTCCGGCAACGGTACCGTCTCCTGGGCCTACGAC
TGGAACATGTACGCCGACGGCACCCTCCCCAGTAACGTCGAATACGTGCCCATGCTGTGGGGCAGCAAGATGTTT
GGAGGCTGGTTGACCGCCATCGAGACTGCCCTTGATAGCGGTAGCAATTACATCATGGGATTCAACGAGCCCGAC
TCCTCCTCCCAAGCCTCGATGACTGCTTCCGAGGCCGCCAGCTCCTACAAGAATTACATCACTCCTTACTCTGGC
AAGGCTAAGCTCGTCACCCCGGCCGTGACCAGTAGCACCACGGAAGGCGAGGGTCTCAGCTGGATGAAGTCCTTC
CTGTCCGAATGCAGCGAGTGTGACATGTCGGTGCTGGCAGTCCACTGGTACGGCACCTCGGCCGATGAGTTCAAG
TCCTTCGTGCAGGAGGCCATGCAGGTGGCGGACGACAACGGATTGGACGAGACCTGGGTGACAGAATTCGCCCTC
ACCAGCGACGAGTCGGCCGGCGGCGATGAGAGTTCAGCGGCGGACTTCCTTGACGAAGTTTTGCCGTGGTTGGAC
AGCCAGAGTGGCGTGGGACGGTATGCGTATTACATGTGTGCAGATGGGTATCTGCTCAGCGGGGAGGAGTTGAGC
TCGAGTGGAAAGGTCTACGTTGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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