Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g8973.t1
Gene name
Location	scaffold_076:319..967
Strand	-
Gene length (bp)	648
Transcript length (bp)	459
Coding sequence length (bp)	459
Protein length (aa)	153

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12273	RCR	Chitin synthesis regulation, resistance to Congo red	1.6E-23	29	146

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	30	52	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g8973.t1 MGVLLRRRDCYYTVNGEVCDGSTWYDWGRWIAFAVIVAVALIIFFLFACYNARRRRRQGLRPHPGTAWLAGPPPT FQQSQQQAQQQGQRPYYADPYYQQPPPPQYTPHPQAYGYFGGQQTGIELQQPPTAYHGGERVYQPPPGPPPEATS KV*
Coding	>Ani_SJS100_1\|g8973.t1 ATGGGTGTTCTACTTCGACGTCGAGACTGTTATTACACCGTCAATGGCGAAGTGTGTGATGGCAGTACTTGGTAT GATTGGGGTCGTTGGATCGCGTTTGCAGTCATTGTCGCTGTGGCGCTAATCATCTTCTTCCTCTTCGCATGCTAC AACGCCCGCCGTCGGCGCAGACAAGGGCTCCGACCTCACCCCGGCACCGCATGGCTTGCCGGCCCTCCTCCGACC TTCCAACAGTCTCAGCAACAAGCACAGCAACAAGGTCAACGACCGTATTACGCCGACCCTTACTACCAACAACCG CCGCCGCCTCAATACACCCCTCATCCGCAAGCTTATGGATATTTTGGAGGCCAGCAGACGGGAATCGAGCTCCAA CAACCGCCGACTGCATACCACGGTGGCGAACGGGTGTACCAGCCACCACCGGGTCCTCCTCCCGAGGCGACTTCC AAGGTGTAA
Transcript	>Ani_SJS100_1\|g8973.t1 ATGGGTGTTCTACTTCGACGTCGAGACTGTTATTACACCGTCAATGGCGAAGTGTGTGATGGCAGTACTTGGTAT GATTGGGGTCGTTGGATCGCGTTTGCAGTCATTGTCGCTGTGGCGCTAATCATCTTCTTCCTCTTCGCATGCTAC AACGCCCGCCGTCGGCGCAGACAAGGGCTCCGACCTCACCCCGGCACCGCATGGCTTGCCGGCCCTCCTCCGACC TTCCAACAGTCTCAGCAACAAGCACAGCAACAAGGTCAACGACCGTATTACGCCGACCCTTACTACCAACAACCG CCGCCGCCTCAATACACCCCTCATCCGCAAGCTTATGGATATTTTGGAGGCCAGCAGACGGGAATCGAGCTCCAA CAACCGCCGACTGCATACCACGGTGGCGAACGGGTGTACCAGCCACCACCGGGTCCTCCTCCCGAGGCGACTTCC AAGGTGTAA
Gene	>Ani_SJS100_1\|g8973.t1 ATGGGTGTTCTACTTCGACGTCGAGACTGGTATGTTTATGGCTGGCTTGTCTGCCTGATCATCCCTGGTTGGAGC GTTTTCTAGGCTTCATCAATCATGACTGGCCCCTAGTGCTGTGGTACATTAGTTCGGGTGGCTGACCGTCTCTTG TAGTTATTACACCGTCAATGGCGAAGTGTGTGATGGCAGTACTTGGTATGATTGGGGTCGTTGGATCGCGTTTGC AGTCATTGTCGCTGTGGCGCTAATCATCTTCTTCCTCTTCGCGTATGCACCTCATCTTCCTGGTCCAGGATTCTG CCGCTTTGATTGGAGACTAACGAGTACGGTAGATGCTACAACGCCCGCCGTCGGCGCAGACAAGGGCTCCGACCT CACCCCGGCACCGCATGGCTTGCCGGCCCTCCTCCGACCTTCCAACAGTCTCAGCAACAAGCACAGCAACAAGGT CAACGACCGTATTACGCCGACCCTTACTACCAACAACCGCCGCCGCCTCAATACACCCCTCATCCGCAAGCTTAT GGATATTTTGGAGGCCAGCAGACGGGAATCGAGCTCCAACAACCGCCGACTGCATACCACGGTGGCGAACGGGTG TACCAGCCACCACCGGGTCCTCCTCCCGAGGCGACTTCCAAGGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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