© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8953.t1 |
| Gene name | |
| Location | scaffold_075:80050..81504 |
| Strand | + |
| Gene length (bp) | 1454 |
| Transcript length (bp) | 1188 |
| Coding sequence length (bp) | 1188 |
| Protein length (aa) | 396 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 86 | 108 | 22 |
| 4 | 120 | 142 | 22 |
| 5 | 174 | 196 | 22 |
| 6 | 203 | 225 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8953.t1 MVDDAHQKLALGVVVAFPVLGGIAVLLRIWSRYLTRSRLGADDILIVVGYILAIGQSITSWYYIKTNYVGIHIWD IPKDYDIKQGLIWNFANQLIYNPCLTMVKLSILMFLRRLESQSRLVNSLIWSTMGITVALFIAVLFVDIFQCSPV AYVYDFSISNGSCINQGAFYVATAATYLFTDLLVLSIPIIITWGLHMPLRRKVAVCVVLCMGAVATGVGVWRIVL LAKGFFPTHPVYDATYSIGFCSSAVEVHVAVLAACAPCLKAIASTYLPRLLGSSRRATYPSTGRQYVPTSTTSYS RRSHVKISAARGDASVAFEMVTPQLPIPGVEEAAHRREMRKYHPYGEDDTSLSSEDGAPTTGIVKTTAISVRYTA DSNLESGGEGTREGSVERLV* |
| Coding | >Ani_SJS100_1|g8953.t1 ATGGTAGACGACGCTCATCAGAAGCTCGCCCTGGGCGTGGTCGTCGCCTTTCCGGTGCTTGGAGGGATCGCAGTG CTGCTGCGAATTTGGAGTCGCTACTTGACTCGGTCGCGCTTGGGAGCAGATGATATCCTGATTGTAGTCGGATAT ATTCTCGCTATCGGGCAATCAATTACCTCCTGGTATTACATCAAGACGAACTACGTGGGGATCCATATCTGGGAT ATCCCAAAAGACTATGACATCAAGCAAGGACTCATTTGGAACTTTGCGAATCAACTAATCTACAATCCCTGCCTG ACGATGGTGAAGCTCTCCATCCTCATGTTTCTGCGTCGCCTCGAGTCCCAATCGCGGCTCGTAAACTCTCTCATA TGGTCCACCATGGGCATTACGGTCGCATTATTCATCGCCGTTCTCTTTGTGGATATCTTTCAGTGCAGTCCGGTC GCCTACGTCTATGACTTTTCTATCTCAAACGGATCGTGCATCAATCAGGGGGCGTTCTATGTGGCGACGGCGGCA ACCTACCTCTTCACCGACTTGCTCGTTCTGTCGATTCCCATCATCATCACCTGGGGGTTACATATGCCGCTGAGG AGGAAGGTTGCTGTCTGCGTGGTGCTCTGCATGGGCGCGGTGGCGACGGGGGTGGGAGTCTGGCGGATAGTGCTC CTCGCTAAGGGCTTCTTCCCAACTCATCCGGTGTACGATGCCACATACTCCATTGGTTTCTGCAGCTCAGCAGTA GAGGTTCATGTCGCCGTTCTGGCTGCCTGTGCCCCTTGTCTCAAGGCCATTGCCAGTACCTACTTGCCTCGTCTG CTGGGCTCATCACGCCGGGCCACCTACCCGTCAACGGGTCGCCAATACGTTCCCACGTCCACTACCTCGTACTCT CGTCGATCTCACGTCAAGATTTCGGCAGCTCGTGGTGATGCTTCGGTCGCGTTCGAGATGGTCACTCCCCAGCTA CCGATTCCAGGGGTTGAAGAGGCCGCGCACAGGAGAGAGATGCGAAAATACCACCCCTATGGGGAAGATGACACC AGTCTCAGTAGTGAGGACGGCGCACCGACGACAGGCATTGTAAAGACTACGGCGATCTCAGTCCGATACACGGCG GACTCCAACTTGGAAAGTGGCGGGGAAGGAACCAGAGAAGGAAGCGTAGAGCGCTTGGTTTAG |
| Transcript | >Ani_SJS100_1|g8953.t1 ATGGTAGACGACGCTCATCAGAAGCTCGCCCTGGGCGTGGTCGTCGCCTTTCCGGTGCTTGGAGGGATCGCAGTG CTGCTGCGAATTTGGAGTCGCTACTTGACTCGGTCGCGCTTGGGAGCAGATGATATCCTGATTGTAGTCGGATAT ATTCTCGCTATCGGGCAATCAATTACCTCCTGGTATTACATCAAGACGAACTACGTGGGGATCCATATCTGGGAT ATCCCAAAAGACTATGACATCAAGCAAGGACTCATTTGGAACTTTGCGAATCAACTAATCTACAATCCCTGCCTG ACGATGGTGAAGCTCTCCATCCTCATGTTTCTGCGTCGCCTCGAGTCCCAATCGCGGCTCGTAAACTCTCTCATA TGGTCCACCATGGGCATTACGGTCGCATTATTCATCGCCGTTCTCTTTGTGGATATCTTTCAGTGCAGTCCGGTC GCCTACGTCTATGACTTTTCTATCTCAAACGGATCGTGCATCAATCAGGGGGCGTTCTATGTGGCGACGGCGGCA ACCTACCTCTTCACCGACTTGCTCGTTCTGTCGATTCCCATCATCATCACCTGGGGGTTACATATGCCGCTGAGG AGGAAGGTTGCTGTCTGCGTGGTGCTCTGCATGGGCGCGGTGGCGACGGGGGTGGGAGTCTGGCGGATAGTGCTC CTCGCTAAGGGCTTCTTCCCAACTCATCCGGTGTACGATGCCACATACTCCATTGGTTTCTGCAGCTCAGCAGTA GAGGTTCATGTCGCCGTTCTGGCTGCCTGTGCCCCTTGTCTCAAGGCCATTGCCAGTACCTACTTGCCTCGTCTG CTGGGCTCATCACGCCGGGCCACCTACCCGTCAACGGGTCGCCAATACGTTCCCACGTCCACTACCTCGTACTCT CGTCGATCTCACGTCAAGATTTCGGCAGCTCGTGGTGATGCTTCGGTCGCGTTCGAGATGGTCACTCCCCAGCTA CCGATTCCAGGGGTTGAAGAGGCCGCGCACAGGAGAGAGATGCGAAAATACCACCCCTATGGGGAAGATGACACC AGTCTCAGTAGTGAGGACGGCGCACCGACGACAGGCATTGTAAAGACTACGGCGATCTCAGTCCGATACACGGCG GACTCCAACTTGGAAAGTGGCGGGGAAGGAACCAGAGAAGGAAGCGTAGAGCGCTTGGTTTAG |
| Gene | >Ani_SJS100_1|g8953.t1 ATGGTAGACGACGCTCATCAGAAGCTCGCCCTGGGCGTGGTCGTCGCCTTTCCGGTGCTTGGAGGGATCGCAGTG CTGCTGCGAATTTGGAGTCGCTACTTGACTCGGTCGCGCTTGGGAGCAGGTGGGAGATACTTACCCTTCTCCACA GGCTAGGTTTCACTAACCATGAGAAGATGATATCCTGATTGTAGTCGGATATGTAGAGGCCCCTTCCTCGTAAAT ACATCTTGCATGGTGCTGACCTTGACAGATTCTCGCTATCGGGCAATCAATTACCTCCTGGTATTGTAGGTGCCC CCTAGACAGCATTGCATTCTGTGCTGATTCTTAACTAAAACAGACATCAAGACGAACTACGTGGGGATCCATATC TGGGATATCCCAAAAGACTATGACATCAAGCAAGGACTCATTGTAGGGGCTCACCTGTCGCCGCTCTTTACCTCT GCCATTGACTGACTGGATCAGTGGAACTTTGCGAATCAACTAATCTACAATCCCTGCCTGACGATGGTGAAGCTC TCCATCCTCATGTTTCTGCGTCGCCTCGAGTCCCAATCGCGGCTCGTAAACTCTCTCATATGGTCCACCATGGGC ATTACGGTCGCATTATTCATCGCCGTTCTCTTTGTGGATATCTTTCAGTGCAGTCCGGTCGCCTACGTCTATGAC TTTTCTATCTCAAACGGATCGTGCATCAATCAGGGGGCGTTCTATGTGGCGACGGCGGCAACCTACCTCTTCACC GACTTGCTCGTTCTGTCGATTCCCATCATCATCACCTGGGGGTTACATATGCCGCTGAGGAGGAAGGTTGCTGTC TGCGTGGTGCTCTGCATGGGCGCGGTGTAAGTGGCGGAAGATCTTCCAAGAGAATGAAGACCAGATGGCTAAGTA GGTACAGGGCGACGGGGGTGGGAGTCTGGCGGATAGTGCTCCTCGCTAAGGGCTTCTTCCCAACTCATCCGGTGT ACGATGCCACATACTCCATTGGTTTCTGCAGCTCAGCAGTAGAGGTTCATGTCGCCGTTCTGGCTGCCTGTGCCC CTTGTCTCAAGGCCATTGCCAGTACCTACTTGCCTCGTCTGCTGGGCTCATCACGCCGGGCCACCTACCCGTCAA CGGGTCGCCAATACGTTCCCACGTCCACTACCTCGTACTCTCGTCGATCTCACGTCAAGATTTCGGCAGCTCGTG GTGATGCTTCGGTCGCGTTCGAGATGGTCACTCCCCAGCTACCGATTCCAGGGGTTGAAGAGGCCGCGCACAGGA GAGAGATGCGAAAATACCACCCCTATGGGGAAGATGACACCAGTCTCAGTAGTGAGGACGGCGCACCGACGACAG GCATTGTAAAGACTACGGCGATCTCAGTCCGATACACGGCGGACTCCAACTTGGAAAGTGGCGGGGAAGGAACCA GAGAAGGAAGCGTAGAGCGCTTGGTTTAG |