© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8949.t1 |
| Gene name | |
| Location | scaffold_075:70243..71667 |
| Strand | - |
| Gene length (bp) | 1424 |
| Transcript length (bp) | 1191 |
| Coding sequence length (bp) | 1191 |
| Protein length (aa) | 397 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 52 | 19 |
| 2 | 65 | 87 | 22 |
| 3 | 107 | 129 | 22 |
| 4 | 142 | 164 | 22 |
| 5 | 191 | 213 | 22 |
| 6 | 226 | 248 | 22 |
| 7 | 263 | 285 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8949.t1 MGARDLDPTIVAIFGQPPAHINLAVSQVRRDNAAVVSLLVLSIIAVVLWFIARLAVRNPFRLDDWLILVSLVFVA ATAGLSLAGSTLGAGKHVWAVSLGDISSIFKILFTYTYMYAAGCSAYKLSILFFYRRVFVVAHQPLSLRLSILFG FLLALSYPVIVWVAMGNCCRPLSYFWNQFLGASGTCIDTDTFFLATGIINMVNDIIILLIPFRQIAKLQMNRRKK IAVCLILALGGFVCVASAVRIYVLYRFTQARDITWMMGPLFIWSSIEPSVAIVCACLPHLGPLVRLTRIRILSSQ GSKGNHMPFTGSPWQSSRRHEGRTHWQAGTQLSPPRHVRALSSTCGVAEDEVGLAVHGTADTTAQHTPSLRSTSE CPIPDHSNVVRSSLEQTVSYR* |
| Coding | >Ani_SJS100_1|g8949.t1 ATGGGCGCGAGGGACTTGGACCCAACTATCGTGGCCATCTTCGGTCAACCCCCTGCCCACATCAATCTAGCCGTT AGCCAGGTGCGTCGAGACAATGCAGCCGTCGTTTCTTTGCTGGTTCTCAGCATTATTGCTGTGGTCCTTTGGTTC ATCGCGCGACTGGCCGTGCGAAATCCTTTTCGACTGGACGACTGGCTGATTCTGGTGTCCCTGGTTTTCGTCGCA GCCACGGCAGGCCTAAGTCTAGCAGGCAGTACATTGGGCGCTGGAAAACACGTGTGGGCAGTATCTCTGGGGGAT ATATCAAGCATCTTCAAGATCCTGTTCACATACACCTATATGTATGCTGCCGGATGTTCAGCTTATAAACTCTCG ATCCTCTTCTTCTACCGCCGCGTCTTTGTGGTGGCCCACCAACCCCTCTCCCTCCGACTCTCTATTCTGTTTGGG TTTCTACTCGCGCTCTCTTACCCCGTCATTGTCTGGGTGGCTATGGGAAACTGCTGTCGACCGCTGTCCTATTTC TGGAATCAGTTCCTGGGCGCGTCGGGAACGTGTATTGACACCGACACATTCTTCCTCGCAACTGGAATCATCAAC ATGGTCAACGACATTATAATTCTGCTCATCCCCTTTCGACAGATTGCAAAGCTGCAGATGAACCGCCGAAAAAAA ATTGCTGTTTGTCTGATTCTTGCATTGGGTGGCTTCGTTTGCGTAGCCAGTGCCGTGCGCATTTACGTTCTCTAT CGATTCACTCAAGCTCGTGATATTACTTGGATGATGGGACCGCTATTTATCTGGTCCAGTATTGAGCCATCCGTG GCCATCGTTTGCGCCTGTCTTCCCCATCTCGGGCCCCTGGTGCGTCTCACGCGCATTCGGATACTATCCAGCCAA GGCAGCAAAGGTAACCACATGCCTTTCACCGGTTCTCCATGGCAGTCGTCGCGCCGTCATGAAGGGCGGACCCAT TGGCAGGCTGGCACACAACTTAGCCCACCAAGACACGTGAGGGCCCTATCCTCTACATGCGGGGTGGCCGAAGAC GAGGTTGGGCTCGCCGTCCATGGGACGGCTGACACGACGGCACAGCACACGCCATCTCTGCGCTCAACATCGGAA TGCCCGATTCCAGATCACTCCAATGTCGTCCGGTCCAGCTTGGAACAAACCGTCTCTTACCGCTAA |
| Transcript | >Ani_SJS100_1|g8949.t1 ATGGGCGCGAGGGACTTGGACCCAACTATCGTGGCCATCTTCGGTCAACCCCCTGCCCACATCAATCTAGCCGTT AGCCAGGTGCGTCGAGACAATGCAGCCGTCGTTTCTTTGCTGGTTCTCAGCATTATTGCTGTGGTCCTTTGGTTC ATCGCGCGACTGGCCGTGCGAAATCCTTTTCGACTGGACGACTGGCTGATTCTGGTGTCCCTGGTTTTCGTCGCA GCCACGGCAGGCCTAAGTCTAGCAGGCAGTACATTGGGCGCTGGAAAACACGTGTGGGCAGTATCTCTGGGGGAT ATATCAAGCATCTTCAAGATCCTGTTCACATACACCTATATGTATGCTGCCGGATGTTCAGCTTATAAACTCTCG ATCCTCTTCTTCTACCGCCGCGTCTTTGTGGTGGCCCACCAACCCCTCTCCCTCCGACTCTCTATTCTGTTTGGG TTTCTACTCGCGCTCTCTTACCCCGTCATTGTCTGGGTGGCTATGGGAAACTGCTGTCGACCGCTGTCCTATTTC TGGAATCAGTTCCTGGGCGCGTCGGGAACGTGTATTGACACCGACACATTCTTCCTCGCAACTGGAATCATCAAC ATGGTCAACGACATTATAATTCTGCTCATCCCCTTTCGACAGATTGCAAAGCTGCAGATGAACCGCCGAAAAAAA ATTGCTGTTTGTCTGATTCTTGCATTGGGTGGCTTCGTTTGCGTAGCCAGTGCCGTGCGCATTTACGTTCTCTAT CGATTCACTCAAGCTCGTGATATTACTTGGATGATGGGACCGCTATTTATCTGGTCCAGTATTGAGCCATCCGTG GCCATCGTTTGCGCCTGTCTTCCCCATCTCGGGCCCCTGGTGCGTCTCACGCGCATTCGGATACTATCCAGCCAA GGCAGCAAAGGTAACCACATGCCTTTCACCGGTTCTCCATGGCAGTCGTCGCGCCGTCATGAAGGGCGGACCCAT TGGCAGGCTGGCACACAACTTAGCCCACCAAGACACGTGAGGGCCCTATCCTCTACATGCGGGGTGGCCGAAGAC GAGGTTGGGCTCGCCGTCCATGGGACGGCTGACACGACGGCACAGCACACGCCATCTCTGCGCTCAACATCGGAA TGCCCGATTCCAGATCACTCCAATGTCGTCCGGTCCAGCTTGGAACAAACCGTCTCTTACCGCTAA |
| Gene | >Ani_SJS100_1|g8949.t1 ATGGGCGCGAGGGACTTGGACCCAACTATCGTGGCCATCTTCGGTCAACCCCCTGCCCACATCAATCTAGCCGTT AGCCAGGTGCGTCGAGACAATGCAGCCGTCGTTTCTTTGCTGGTTCTCAGCATTATTGCTGTGGTCCTTTGGTTC ATCGCGCGACTGGCCGTGCGAAATCCTTTTCGACTGGACGACTGGCTGATTCTGGTGTCCCTGGTGCGTGAACAA CATGTGTCGGTCAGAAATTGATCTTCAAGTTCTAACATCAACATTGCTACTTACCAGGTTTTCGTCGCAGCCACG GCAGGCCTAAGTCTAGCAGGTAGAACGCGGATTACTTCCTATTTTCCCCGATACATCAGCCGCTAAGTATTGGTT AAATTCTAGGCAGTACATTGGGCGCTGGAAAACACGTGTGGGCAGTATCTCTGGGGGATATATCAAGCATCTTCA AGGTGGGGTTTGTGCGATACTTTTCAAGCGTATCAGGTTGCTTACCCGTCAGATCCTGTTCACATACACCTATAT GTATGCTGCCGGATGTTCAGCTTATAAACTCTCGATCCTCTTCTTCTACCGCCGCGTCTTTGTGGTGGCCCACCA ACCCCTCTCCCTCCGACTCTCTATTCTGTTTGGGTTTCTACTCGCGCTCTCTTACCCCGTCATTGTCTGGGTGGC TATGGGAAACTGCTGTCGACCGCTGTCCTATTTCTGGAATCAGTTCCTGGGCGCGTCGGGAACGTGTATTGACAC CGACACATTCTTCCTCGCAACTGGAATCATCAACATGGTCAACGACATTATAATTCTGCTCATCCCCTTTCGACA GATTGCAAAGCTGCAGATGAACCGCCGAAAAAAAATTGCTGTTTGTCTGATTCTTGCATTGGGTGGCTTGTGAGC GTGTCCTGTCCCGGGTTTGGAACACACCTAACGTACATTGCAGCGTTTGCGTAGCCAGTGCCGTGCGCATTTACG TTCTCTATCGATTCACTCAAGCTCGTGATATTACTTGGATGATGGGACCGCTATTTATCTGGTCCAGTATTGAGC CATCCGTGGCCATCGTTTGCGCCTGTCTTCCCCATCTCGGGCCCCTGGTGCGTCTCACGCGCATTCGGATACTAT CCAGCCAAGGCAGCAAAGGTAACCACATGCCTTTCACCGGTTCTCCATGGCAGTCGTCGCGCCGTCATGAAGGGC GGACCCATTGGCAGGCTGGCACACAACTTAGCCCACCAAGACACGTGAGGGCCCTATCCTCTACATGCGGGGTGG CCGAAGACGAGGTTGGGCTCGCCGTCCATGGGACGGCTGACACGACGGCACAGCACACGCCATCTCTGCGCTCAA CATCGGAATGCCCGATTCCAGATCACTCCAATGTCGTCCGGTCCAGCTTGGAACAAACCGTCTCTTACCGCTAA |