© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8944.t1 |
| Gene name | |
| Location | scaffold_075:59894..60975 |
| Strand | - |
| Gene length (bp) | 1081 |
| Transcript length (bp) | 1026 |
| Coding sequence length (bp) | 1026 |
| Protein length (aa) | 342 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04488 | Gly_transf_sug | Glycosyltransferase sugar-binding region containing DXD motif | 1.9E-12 | 94 | 174 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 217 | 239 | 22 |
| 3 | 295 | 317 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8944.t1 MAHARIRLVLAALLLFILTSLLAPFLCNLYLLLRLPFVWKTSSANAIITQQHDGFDLTFSDYNSTYSVADTGLPV PVPARLHHVQLGTQSPRPEWQAARDECLKQHPDWETFLWTDENASRFVQNYYPHFLPTWENYPHLVQRVDALRYM VLHKYGGAVLDYDLACKRSLEPLRRFEFVAPAANPVGISVGMMLAAPNNPYVNDLVRNLPNFNRRWSFLPYITVM FSTGCHYASTIYTMQRNTSTLRVLTGPPENPRMHMLNGVVNTPLFRHLGSSSWHEKDARFIKAFANMDQRVAFGM VLFALVAGCWAVSLCVARGRAWHQREAVSQEIEMLRKAHGS* |
| Coding | >Ani_SJS100_1|g8944.t1 ATGGCTCACGCGCGCATCCGCCTCGTGCTGGCAGCCCTTCTTCTCTTCATTCTAACCTCCCTGCTCGCCCCATTT CTTTGTAATCTTTACCTACTGCTGCGATTACCCTTTGTGTGGAAAACCTCATCTGCCAATGCGATTATCACCCAG CAACATGACGGATTCGATCTGACCTTTTCCGACTACAACAGCACGTACTCCGTCGCTGACACCGGCCTGCCCGTC CCTGTCCCTGCACGGCTGCATCACGTCCAATTGGGTACACAATCCCCACGTCCAGAGTGGCAGGCTGCTCGCGAT GAGTGCCTCAAGCAACATCCGGACTGGGAGACGTTTCTGTGGACCGACGAGAATGCTAGTCGCTTCGTCCAGAAT TACTACCCGCACTTTCTCCCCACCTGGGAAAATTATCCACACCTAGTCCAGCGCGTGGATGCATTGCGATACATG GTCCTGCACAAGTATGGAGGCGCCGTATTGGATTATGATTTGGCATGTAAACGGTCGTTGGAACCCCTGCGTCGA TTCGAATTTGTCGCGCCGGCGGCCAACCCAGTCGGTATCTCCGTTGGCATGATGCTCGCGGCACCGAACAACCCC TATGTTAATGATCTGGTGCGGAACCTGCCAAATTTTAATCGACGGTGGTCGTTTCTGCCTTACATCACAGTTATG TTTAGCACGGGATGCCATTATGCCTCAACCATCTACACCATGCAACGCAATACCTCCACCCTCCGCGTCCTAACC GGTCCCCCCGAGAACCCGCGAATGCATATGCTCAACGGTGTGGTCAATACCCCGCTCTTTCGACATTTAGGCAGT TCCTCATGGCATGAGAAAGACGCACGCTTCATCAAAGCGTTTGCCAATATGGATCAACGGGTGGCGTTTGGGATG GTTTTGTTCGCTTTGGTGGCAGGATGCTGGGCTGTGAGCTTATGTGTGGCTCGGGGTCGGGCATGGCATCAGAGG GAGGCAGTCTCGCAGGAGATAGAGATGTTGCGGAAAGCACATGGTTCATAA |
| Transcript | >Ani_SJS100_1|g8944.t1 ATGGCTCACGCGCGCATCCGCCTCGTGCTGGCAGCCCTTCTTCTCTTCATTCTAACCTCCCTGCTCGCCCCATTT CTTTGTAATCTTTACCTACTGCTGCGATTACCCTTTGTGTGGAAAACCTCATCTGCCAATGCGATTATCACCCAG CAACATGACGGATTCGATCTGACCTTTTCCGACTACAACAGCACGTACTCCGTCGCTGACACCGGCCTGCCCGTC CCTGTCCCTGCACGGCTGCATCACGTCCAATTGGGTACACAATCCCCACGTCCAGAGTGGCAGGCTGCTCGCGAT GAGTGCCTCAAGCAACATCCGGACTGGGAGACGTTTCTGTGGACCGACGAGAATGCTAGTCGCTTCGTCCAGAAT TACTACCCGCACTTTCTCCCCACCTGGGAAAATTATCCACACCTAGTCCAGCGCGTGGATGCATTGCGATACATG GTCCTGCACAAGTATGGAGGCGCCGTATTGGATTATGATTTGGCATGTAAACGGTCGTTGGAACCCCTGCGTCGA TTCGAATTTGTCGCGCCGGCGGCCAACCCAGTCGGTATCTCCGTTGGCATGATGCTCGCGGCACCGAACAACCCC TATGTTAATGATCTGGTGCGGAACCTGCCAAATTTTAATCGACGGTGGTCGTTTCTGCCTTACATCACAGTTATG TTTAGCACGGGATGCCATTATGCCTCAACCATCTACACCATGCAACGCAATACCTCCACCCTCCGCGTCCTAACC GGTCCCCCCGAGAACCCGCGAATGCATATGCTCAACGGTGTGGTCAATACCCCGCTCTTTCGACATTTAGGCAGT TCCTCATGGCATGAGAAAGACGCACGCTTCATCAAAGCGTTTGCCAATATGGATCAACGGGTGGCGTTTGGGATG GTTTTGTTCGCTTTGGTGGCAGGATGCTGGGCTGTGAGCTTATGTGTGGCTCGGGGTCGGGCATGGCATCAGAGG GAGGCAGTCTCGCAGGAGATAGAGATGTTGCGGAAAGCACATGGTTCATAA |
| Gene | >Ani_SJS100_1|g8944.t1 ATGGCTCACGCGCGCATCCGCCTCGTGCTGGCAGCCCTTCTTCTCTTCATTCTAACCTCCCTGCTCGCCCCATTT CTTTGTAATCTTTACCTACTGCTGCGATTACCCTTTGTGTGGAAAACCTCATCTGCCAATGCGATTATCACCCAG CAACATGACGGATTCGATCTGACCTTTTCCGACTACAACAGCACGTACTCCGTCGCTGACACCGGCCTGCCCGTC CCTGTCCCTGCACGGCTGCATCACGTCCAATTGGGTACACAATCCCCACGTCCAGAGTGGCAGGCTGCTCGCGAT GAGTGCCTCAAGCAACATCCGGACTGGGAGACGTTTCTGTGGACCGACGAGAATGCTAGTCGCTTCGTCCAGAAT TACTACCCGCACTTTCTCCCCACCTGGGAAAATTATCCACACCTAGTCCAGCGCGTGGATGCATTGCGATACATG GTCCTGCACAAGTATGGAGGCGCCGTATTGGATTATGATTTGGCATGTAAACGGTCGTTGGAACCCCTGCGTCGA TTCGAATTTGTCGCGCCGGCGGCCAACCCAGTCGGTATCTCCGTTGGCATGATGCTCGCGGCACCGAACAACCCC TATGTTAATGATCTGGTGCGGAACCTGCCAAATTTTAATCGACGGTGGTCGTTTCTGCCTTACATCACAGTTATG TTTAGCACGGGATGCCATTATGCCTCGTATGACTCTTTTCGACGCTCACAGAGGAATTGTATCGGAGCTAACAGG TTATAGAACCATCTACACCATGCAACGCAATACCTCCACCCTCCGCGTCCTAACCGGTCCCCCCGAGAACCCGCG AATGCATATGCTCAACGGTGTGGTCAATACCCCGCTCTTTCGACATTTAGGCAGTTCCTCATGGCATGAGAAAGA CGCACGCTTCATCAAAGCGTTTGCCAATATGGATCAACGGGTGGCGTTTGGGATGGTTTTGTTCGCTTTGGTGGC AGGATGCTGGGCTGTGAGCTTATGTGTGGCTCGGGGTCGGGCATGGCATCAGAGGGAGGCAGTCTCGCAGGAGAT AGAGATGTTGCGGAAAGCACATGGTTCATAA |