© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g8943.t1 |
| Gene name | |
| Location | scaffold_075:58735..59780 |
| Strand | + |
| Gene length (bp) | 1045 |
| Transcript length (bp) | 885 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02585 | PIG-L | GlcNAc-PI de-N-acetylase | 1.4E-21 | 64 | 187 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8943.t1 MGSPTRMLRRLLRQVRRHDWRCLMAYSALIIPSAAVFLYLLLAYYLAGDPRLVPHTIQQARNVLLVTAHPDDETL FFSPTILHGRNNPDVTRSLLVLSTGDYHGQGDIRKGEIERSCAALGIPSDRCVVLEHGALQDNPKKWWRQDVIQD IVVHYVHMWKVDLIYTFDDGGVSGHINHRAVSAGVRKYAESFPHAPPVYALQSTFLLRKYSSLIDLILTSVPFSW RIGAAVLTAPPAPTEHDTYGNKALLVSPWQTYLTARTAFSQHDSQYSWDRVLYLVVSRYMWFNNLYRIA* |
| Coding | >Ani_SJS100_1|g8943.t1 ATGGGATCCCCAACCCGCATGCTCAGGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTCTGATGGCA TATTCAGCGCTGATCATCCCATCGGCTGCCGTCTTCCTGTATCTTCTTCTGGCATACTACCTGGCGGGAGATCCC CGGCTTGTTCCACACACCATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACGAGACTCTG TTCTTTAGCCCAACTATTCTTCACGGCCGCAACAACCCGGACGTCACCCGTTCCTTGTTGGTATTATCGACAGGC GACTATCATGGCCAAGGAGATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGCATCCCCTCCGAT CGGTGTGTCGTCCTCGAGCATGGTGCATTACAGGATAACCCAAAGAAGTGGTGGCGCCAGGATGTCATCCAGGAT ATAGTGGTCCATTACGTTCACATGTGGAAAGTGGATCTAATCTATACTTTCGACGATGGTGGAGTATCCGGCCAT ATCAACCATAGGGCCGTCAGTGCCGGAGTTCGGAAATATGCAGAGAGCTTTCCGCATGCCCCGCCGGTCTACGCG CTACAGAGTACATTCCTCCTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACATCAGTGCCATTCTCATGG CGCATCGGAGCAGCGGTCTTGACAGCCCCACCGGCGCCCACAGAGCACGACACATATGGAAATAAAGCGCTGCTG GTAAGCCCGTGGCAGACCTATCTTACTGCGCGGACAGCATTCAGTCAGCATGATAGTCAGTACTCGTGGGATCGC GTGCTGTACTTGGTAGTGAGCCGTTATATGTGGTTCAATAATCTATACCGGATAGCCTAA |
| Transcript | >Ani_SJS100_1|g8943.t1 ATGGGATCCCCAACCCGCATGCTCAGGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTCTGATGGCA TATTCAGCGCTGATCATCCCATCGGCTGCCGTCTTCCTGTATCTTCTTCTGGCATACTACCTGGCGGGAGATCCC CGGCTTGTTCCACACACCATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACGAGACTCTG TTCTTTAGCCCAACTATTCTTCACGGCCGCAACAACCCGGACGTCACCCGTTCCTTGTTGGTATTATCGACAGGC GACTATCATGGCCAAGGAGATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGCATCCCCTCCGAT CGGTGTGTCGTCCTCGAGCATGGTGCATTACAGGATAACCCAAAGAAGTGGTGGCGCCAGGATGTCATCCAGGAT ATAGTGGTCCATTACGTTCACATGTGGAAAGTGGATCTAATCTATACTTTCGACGATGGTGGAGTATCCGGCCAT ATCAACCATAGGGCCGTCAGTGCCGGAGTTCGGAAATATGCAGAGAGCTTTCCGCATGCCCCGCCGGTCTACGCG CTACAGAGTACATTCCTCCTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACATCAGTGCCATTCTCATGG CGCATCGGAGCAGCGGTCTTGACAGCCCCACCGGCGCCCACAGAGCACGACACATATGGAAATAAAGCGCTGCTG GTAAGCCCGTGGCAGACCTATCTTACTGCGCGGACAGCATTCAGTCAGCATGATAGTCAGTACTCGTGGGATCGC GTGCTGTACTTGGTAGTGAGCCGTTATATGTGGTTCAATAATCTATACCGGATAGCCTAA |
| Gene | >Ani_SJS100_1|g8943.t1 ATGGGATCCCCAACCCGCATGCTCAGGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTCTGATGGCA TATTCAGCGCTGATCATCCCATCGGCTGCCGTCTTCCTGTATCTTCTTCTGGCATACTACCTGGCGGGAGATCCC CGGCTTGTTCCACACACCATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACGAGACTCTG TTCTTTAGCCCAACTATTCTTCACGGCCGCAACAACCCGGACGTCACCCGTTCCTTGTTGGTATTATCGACAGGT GAGTCCTCCCTTCACTTAGAATTTCCGAGGAGTGAATTTTCTAATGTGATGCAGGCGACTATCATGGCCAAGGAG ATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGCATCCCCTCCGATCGGTGTGTCGTCCTCGAGC ATGGTGCATTACAGGATAACCCAAAGAAGTGGTGGCGCCAGGATGTCATCCAGGATATAGTGGTCCATTACGTTC ACATGTGGAAAGTGGATCTAGTAAGTTGCCCCAACACTCTTTCACCATAGTACACAGGAGCACTAAGACTACAGA AGATCTATACTTTCGACGATGGTGGAGTATCCGGCCATATCAACCATAGGGCCGTCAGTGCCGGAGTTCGGTAAG TCAACCATACGTCATGACTAAGAAAAGGCTGACTGTGAGTAGGAAATATGCAGAGAGCTTTCCGCATGCCCCGCC GGTCTACGCGCTACAGAGTACATTCCTCCTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACATCAGTGCC ATTCTCATGGCGCATCGGAGCAGCGGTCTTGACAGCCCCACCGGCGCCCACAGAGCACGACACATATGGAAATAA AGCGCTGCTGGTAAGCCCGTGGCAGACCTATCTTACTGCGCGGACAGCATTCAGTCAGCATGATAGTCAGTACTC GTGGGATCGCGTGCTGTACTTGGTAGTGAGCCGTTATATGTGGTTCAATAATCTATACCGGATAGCCTAA |