© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8933.t1 |
| Gene name | |
| Location | scaffold_075:39624..41120 |
| Strand | + |
| Gene length (bp) | 1496 |
| Transcript length (bp) | 1353 |
| Coding sequence length (bp) | 1353 |
| Protein length (aa) | 451 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00266 | Aminotran_5 | Aminotransferase class-V | 1.6E-17 | 65 | 247 |
| PF00155 | Aminotran_1_2 | Aminotransferase class I and II | 8.4E-07 | 35 | 208 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030170 | pyridoxal phosphate binding | Yes |
| GO:0009058 | biosynthetic process | Yes |
| GO:0070279 | vitamin B6 binding | No |
| GO:0003674 | molecular_function | No |
| GO:0008150 | biological_process | No |
| GO:0043168 | anion binding | No |
| GO:0008152 | metabolic process | No |
| GO:0019842 | vitamin binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 54 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8933.t1 MASIDASIVPFGAAMREQFLFDPNFLNLNHGSFGTYPAAVRTALRHFQDQVEARPDPFIRYTTPKELDVSREAVA KLLNVPRSECVFVKNATTGVNTVLHNLSFKSDDVIIYFETVYGALEKGIVSFIESRAAQIRKVRYEMPTSHENLV DRFLQVVREARSEGLNVKLALFDVVTSLPAVRFPFERLTEVCREEGILSLIDGAHGIGQLPLDLGKLQPDFFTSN CHKWLFVPRSCCVLYVPKRNQHLIRTTIPTSWGFIPSEDSPATAPSVMKSDDVTKSAFESLFEFVATNDDTPYFC VPAALEFRKTICGGEKRIYEYLERLANEAADIVAAALGTDVMEEGDLQPGKQSNLRRCAMSTVRLPFTFREDLAA SDSTVTLLRADEAGVVVRWFQTTLVEEHGTFVPFVEHGGWLWVRLSAQVYLERKDFEWLAEVLKVLCQRYRTIRY * |
| Coding | >Ani_SJS100_1|g8933.t1 ATGGCTTCCATTGATGCATCTATCGTTCCCTTTGGGGCGGCGATGCGTGAGCAATTTCTTTTCGATCCCAACTTC CTAAATCTGAATCACGGCTCATTTGGAACCTATCCTGCAGCGGTTCGCACCGCATTGCGCCACTTCCAGGATCAA GTTGAGGCGCGTCCAGATCCATTCATCCGCTACACCACTCCCAAAGAGCTAGATGTCTCTCGCGAGGCTGTCGCC AAGCTACTGAATGTCCCGCGGAGCGAATGTGTCTTTGTCAAAAATGCCACTACGGGAGTGAACACCGTCCTGCAT AACTTGTCTTTCAAGTCAGATGATGTCATCATCTATTTTGAAACCGTCTACGGCGCTCTCGAAAAAGGCATTGTA TCCTTTATCGAATCTAGAGCCGCTCAGATTCGCAAAGTCCGATATGAAATGCCGACTAGTCACGAGAACCTCGTG GACCGCTTTCTCCAGGTCGTCCGGGAGGCACGGAGCGAGGGATTGAACGTGAAGCTTGCCCTTTTTGATGTGGTG ACTAGCCTGCCAGCTGTGCGGTTTCCGTTTGAAAGGCTCACTGAAGTTTGTCGCGAAGAAGGAATCCTCAGCTTG ATTGATGGTGCGCACGGTATTGGGCAGCTGCCGTTGGATCTCGGGAAGCTACAGCCGGACTTCTTTACAAGTAAT TGCCATAAATGGCTTTTCGTCCCCCGGAGTTGCTGTGTGCTATATGTCCCGAAACGCAACCAACATCTCATTCGA ACCACCATTCCCACCTCCTGGGGCTTTATCCCCTCTGAAGACTCTCCTGCGACGGCCCCTTCTGTCATGAAAAGT GACGATGTGACGAAAAGCGCATTTGAGAGTCTCTTCGAATTCGTCGCTACCAATGACGATACGCCCTACTTCTGT GTTCCTGCTGCGTTGGAATTCCGCAAGACGATATGTGGTGGCGAAAAGCGTATTTACGAGTACCTGGAGAGATTG GCAAATGAGGCTGCCGATATCGTTGCCGCAGCACTTGGAACAGATGTTATGGAGGAGGGGGACCTACAACCGGGG AAGCAGAGCAATCTTAGACGATGTGCCATGAGCACAGTCCGGTTACCGTTCACGTTCAGGGAGGATTTGGCAGCT TCTGATTCTACTGTTACGCTTTTGAGAGCCGATGAGGCTGGCGTGGTGGTCAGGTGGTTCCAAACTACTTTGGTA GAGGAGCATGGGACATTTGTTCCTTTTGTTGAGCATGGGGGCTGGCTTTGGGTGAGACTTTCTGCCCAGGTCTAC CTTGAGCGAAAGGACTTTGAGTGGTTGGCTGAAGTCCTCAAAGTGCTGTGCCAGCGATACAGGACTATAAGATAT TAG |
| Transcript | >Ani_SJS100_1|g8933.t1 ATGGCTTCCATTGATGCATCTATCGTTCCCTTTGGGGCGGCGATGCGTGAGCAATTTCTTTTCGATCCCAACTTC CTAAATCTGAATCACGGCTCATTTGGAACCTATCCTGCAGCGGTTCGCACCGCATTGCGCCACTTCCAGGATCAA GTTGAGGCGCGTCCAGATCCATTCATCCGCTACACCACTCCCAAAGAGCTAGATGTCTCTCGCGAGGCTGTCGCC AAGCTACTGAATGTCCCGCGGAGCGAATGTGTCTTTGTCAAAAATGCCACTACGGGAGTGAACACCGTCCTGCAT AACTTGTCTTTCAAGTCAGATGATGTCATCATCTATTTTGAAACCGTCTACGGCGCTCTCGAAAAAGGCATTGTA TCCTTTATCGAATCTAGAGCCGCTCAGATTCGCAAAGTCCGATATGAAATGCCGACTAGTCACGAGAACCTCGTG GACCGCTTTCTCCAGGTCGTCCGGGAGGCACGGAGCGAGGGATTGAACGTGAAGCTTGCCCTTTTTGATGTGGTG ACTAGCCTGCCAGCTGTGCGGTTTCCGTTTGAAAGGCTCACTGAAGTTTGTCGCGAAGAAGGAATCCTCAGCTTG ATTGATGGTGCGCACGGTATTGGGCAGCTGCCGTTGGATCTCGGGAAGCTACAGCCGGACTTCTTTACAAGTAAT TGCCATAAATGGCTTTTCGTCCCCCGGAGTTGCTGTGTGCTATATGTCCCGAAACGCAACCAACATCTCATTCGA ACCACCATTCCCACCTCCTGGGGCTTTATCCCCTCTGAAGACTCTCCTGCGACGGCCCCTTCTGTCATGAAAAGT GACGATGTGACGAAAAGCGCATTTGAGAGTCTCTTCGAATTCGTCGCTACCAATGACGATACGCCCTACTTCTGT GTTCCTGCTGCGTTGGAATTCCGCAAGACGATATGTGGTGGCGAAAAGCGTATTTACGAGTACCTGGAGAGATTG GCAAATGAGGCTGCCGATATCGTTGCCGCAGCACTTGGAACAGATGTTATGGAGGAGGGGGACCTACAACCGGGG AAGCAGAGCAATCTTAGACGATGTGCCATGAGCACAGTCCGGTTACCGTTCACGTTCAGGGAGGATTTGGCAGCT TCTGATTCTACTGTTACGCTTTTGAGAGCCGATGAGGCTGGCGTGGTGGTCAGGTGGTTCCAAACTACTTTGGTA GAGGAGCATGGGACATTTGTTCCTTTTGTTGAGCATGGGGGCTGGCTTTGGGTGAGACTTTCTGCCCAGGTCTAC CTTGAGCGAAAGGACTTTGAGTGGTTGGCTGAAGTCCTCAAAGTGCTGTGCCAGCGATACAGGACTATAAGATAT TAG |
| Gene | >Ani_SJS100_1|g8933.t1 ATGGCTTCCATTGATGCATCTATCGTTCCCTTTGGGGCGGCGATGCGTGAGCAATTTCTTTTCGATCCCAACTTC CTAAATCTGAATCACGGTAAGAACACGCGCTGTAGAACTTATCAAGCGTTGTAGCATCAAAGGTTGATCCACTGG CGCTGATCAACTCCAGGCTCATTTGGAACCTATCCTGCAGCGGTTCGCACCGCATTGCGCCACTTCCAGGATCAA GTTGAGGCGCGTCCAGATCCATTCATCCGCTACACCACTCCCAAAGAGCTAGATGTCTCTCGCGAGGCTGTCGCC AAGCTACTGAATGTCCCGCGGAGCGAATGTGTCTTTGTCAAAAATGCCACTACGGGAGTGAACACCGTCCTGCAT AACTTGTCTTTCAAGTCAGATGATGTCATCATCTATTTTGAAACCGTCTACGGCGCTCTCGAAAAAGGCATTGTA TCCTTTATCGAATCTAGAGCCGCTCAGATTCGCAAAGTCCGATATGAAATGCCGACTAGTCACGAGAACCTCGTG GACCGCTTTCTCCAGGTCGTCCGGGAGGCACGGAGCGAGGGATTGAACGTGAAGCTTGCCCTTTTTGATGTGGTG ACTAGCCTGCCAGCTGTGCGGTTTCCGTTTGAAAGGCTCACTGAAGTTTGTCGCGAAGAAGGAATCCTCAGCTTG ATTGATGGTGCGCACGGTATTGGGCAGCTGCCGTTGGATCTCGGGAAGCTACAGCCGGACTTCTTTACAAGTAAT TGCCATAAGTAAGTTCCTGCTCAGTTCCATGCTCGCTGATTCTCCCTCAGTAGTCTCATATAGAAATGATCAATA GATGGCTTTTCGTCCCCCGGAGTTGCTGTGTGCTATATGTCCCGAAACGCAACCAACATCTCATTCGAACCACCA TTCCCACCTCCTGGGGCTTTATCCCCTCTGAAGACTCTCCTGCGACGGCCCCTTCTGTCATGAAAAGTGACGATG TGACGAAAAGCGCATTTGAGAGTCTCTTCGAATTCGTCGCTACCAATGACGATACGCCCTACTTCTGTGTTCCTG CTGCGTTGGAATTCCGCAAGACGATATGTGGTGGCGAAAAGCGTATTTACGAGTACCTGGAGAGATTGGCAAATG AGGCTGCCGATATCGTTGCCGCAGCACTTGGAACAGATGTTATGGAGGAGGGGGACCTACAACCGGGGAAGCAGA GCAATCTTAGACGATGTGCCATGAGCACAGTCCGGTTACCGTTCACGTTCAGGGAGGATTTGGCAGCTTCTGATT CTACTGTTACGCTTTTGAGAGCCGATGAGGCTGGCGTGGTGGTCAGGTGGTTCCAAACTACTTTGGTAGAGGAGC ATGGGACATTTGTTCCTTTTGTTGAGCATGGGGGCTGGCTTTGGGTGAGACTTTCTGCCCAGGTCTACCTTGAGC GAAAGGACTTTGAGTGGTTGGCTGAAGTCCTCAAAGTGCTGTGCCAGCGATACAGGACTATAAGATATTAG |