Protein ID | Ani_SJS100_1|g8900.t1 |
Gene name | |
Location | scaffold_074:111124..112570 |
Strand | + |
Gene length (bp) | 1446 |
Transcript length (bp) | 1446 |
Coding sequence length (bp) | 1446 |
Protein length (aa) | 482 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12906 | RINGv | RING-variant domain | 5.1E-05 | 80 | 139 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008270 | zinc ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0046872 | metal ion binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 69 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8900.t1 MASLPGYSASSRPQSSDNNTTSTTQQNSVSTNITSSASSTESFETSDTVLLNGTSDTATARGSPTSPTLADASGE EPRRCWICYTDETEDSPLNSQWRSPCPCALTAHEACLLDWLADLENPRSRRRNGHDAKMLCPQCKTEIIVSRPRS YIVDVVRLVERLAGRMVLPGMVFTLGATVWAGCCAHGVYSMYFVFGTDEARQILEETADGAWNSGLNLGLPLIPL VLIFSRTRYADGLLPAIPVMFFATHQPGQELELDLWPPSAAVTFAALPYLKSFYGSIYERMFGKLERRWIAEVQP RQSDVNEFDDNAPPEHPEPDPPNDDNGVLMEIDLELRMGNEDGPQGLFGFNGGNAQGGQGQNQGGNGQPLGLGRR DELVADTSSLADIILGALAFPAISASMGGLLKYLLPTSWTTPSTLGKVRPGLLQTRWGRSVVGGCAFVLLKDALV LYCRWKLAQTHRRRKVLNYDRSKKRVGKAGS* |
Coding | >Ani_SJS100_1|g8900.t1 ATGGCTTCCCTCCCAGGTTATTCGGCCTCTAGTCGGCCACAATCATCTGATAATAATACTACCTCCACTACTCAA CAGAACAGCGTATCCACGAATATAACCAGCAGCGCTTCATCAACGGAATCATTTGAAACTAGCGATACCGTCCTG CTCAACGGCACCTCGGATACCGCCACCGCCCGTGGCTCCCCGACGAGTCCGACCCTCGCCGATGCGTCTGGTGAG GAACCACGCAGATGTTGGATTTGCTATACAGATGAGACCGAGGACTCTCCCCTCAATTCACAATGGCGCTCGCCA TGTCCTTGCGCCTTGACCGCCCACGAAGCTTGCCTGCTCGACTGGTTGGCGGATCTCGAGAATCCCCGATCGCGG AGGCGCAACGGCCATGACGCAAAGATGCTGTGTCCGCAATGCAAGACTGAAATTATCGTTTCCCGTCCCCGAAGC TATATTGTGGATGTAGTGCGACTGGTTGAACGCCTCGCGGGTCGGATGGTTCTTCCAGGAATGGTATTTACGTTG GGGGCAACCGTGTGGGCGGGGTGCTGTGCGCACGGAGTATACTCGATGTATTTTGTCTTTGGGACAGACGAGGCT CGCCAGATCTTGGAGGAAACGGCAGATGGGGCATGGAATTCGGGGCTTAACCTGGGCTTGCCCCTCATCCCGCTC GTGTTGATCTTCTCGCGCACTCGGTATGCAGATGGTCTTCTCCCCGCCATCCCCGTGATGTTCTTTGCCACACAT CAACCCGGACAGGAGCTGGAGTTGGATCTCTGGCCGCCCAGTGCGGCAGTCACGTTTGCCGCTCTTCCGTATCTG AAAAGCTTTTACGGCAGTATCTACGAGAGAATGTTCGGCAAGTTGGAGCGGAGGTGGATTGCGGAAGTACAACCG CGCCAGTCGGATGTCAATGAGTTTGATGATAATGCGCCGCCCGAACATCCCGAGCCAGACCCACCTAATGATGAC AACGGTGTTCTGATGGAGATCGATTTGGAGCTACGCATGGGCAACGAAGATGGGCCGCAGGGCTTGTTCGGCTTT AATGGAGGAAATGCGCAGGGTGGACAAGGGCAGAACCAGGGTGGAAACGGCCAACCCTTGGGCTTGGGACGACGG GATGAGCTGGTAGCCGACACAAGCAGTCTGGCGGATATCATCCTCGGAGCACTTGCGTTTCCCGCCATATCTGCG TCGATGGGCGGGCTGTTGAAGTACCTCTTGCCAACTTCATGGACGACGCCATCTACTCTGGGAAAGGTCCGACCA GGACTGCTGCAGACCCGCTGGGGCCGGAGCGTAGTTGGCGGATGTGCGTTTGTGCTATTGAAGGATGCGTTGGTT TTATACTGTCGGTGGAAATTGGCGCAGACACACCGACGCCGCAAGGTGCTGAACTACGATCGTTCGAAGAAGCGG GTCGGGAAGGCTGGTAGTTGA |
Transcript | >Ani_SJS100_1|g8900.t1 ATGGCTTCCCTCCCAGGTTATTCGGCCTCTAGTCGGCCACAATCATCTGATAATAATACTACCTCCACTACTCAA CAGAACAGCGTATCCACGAATATAACCAGCAGCGCTTCATCAACGGAATCATTTGAAACTAGCGATACCGTCCTG CTCAACGGCACCTCGGATACCGCCACCGCCCGTGGCTCCCCGACGAGTCCGACCCTCGCCGATGCGTCTGGTGAG GAACCACGCAGATGTTGGATTTGCTATACAGATGAGACCGAGGACTCTCCCCTCAATTCACAATGGCGCTCGCCA TGTCCTTGCGCCTTGACCGCCCACGAAGCTTGCCTGCTCGACTGGTTGGCGGATCTCGAGAATCCCCGATCGCGG AGGCGCAACGGCCATGACGCAAAGATGCTGTGTCCGCAATGCAAGACTGAAATTATCGTTTCCCGTCCCCGAAGC TATATTGTGGATGTAGTGCGACTGGTTGAACGCCTCGCGGGTCGGATGGTTCTTCCAGGAATGGTATTTACGTTG GGGGCAACCGTGTGGGCGGGGTGCTGTGCGCACGGAGTATACTCGATGTATTTTGTCTTTGGGACAGACGAGGCT CGCCAGATCTTGGAGGAAACGGCAGATGGGGCATGGAATTCGGGGCTTAACCTGGGCTTGCCCCTCATCCCGCTC GTGTTGATCTTCTCGCGCACTCGGTATGCAGATGGTCTTCTCCCCGCCATCCCCGTGATGTTCTTTGCCACACAT CAACCCGGACAGGAGCTGGAGTTGGATCTCTGGCCGCCCAGTGCGGCAGTCACGTTTGCCGCTCTTCCGTATCTG AAAAGCTTTTACGGCAGTATCTACGAGAGAATGTTCGGCAAGTTGGAGCGGAGGTGGATTGCGGAAGTACAACCG CGCCAGTCGGATGTCAATGAGTTTGATGATAATGCGCCGCCCGAACATCCCGAGCCAGACCCACCTAATGATGAC AACGGTGTTCTGATGGAGATCGATTTGGAGCTACGCATGGGCAACGAAGATGGGCCGCAGGGCTTGTTCGGCTTT AATGGAGGAAATGCGCAGGGTGGACAAGGGCAGAACCAGGGTGGAAACGGCCAACCCTTGGGCTTGGGACGACGG GATGAGCTGGTAGCCGACACAAGCAGTCTGGCGGATATCATCCTCGGAGCACTTGCGTTTCCCGCCATATCTGCG TCGATGGGCGGGCTGTTGAAGTACCTCTTGCCAACTTCATGGACGACGCCATCTACTCTGGGAAAGGTCCGACCA GGACTGCTGCAGACCCGCTGGGGCCGGAGCGTAGTTGGCGGATGTGCGTTTGTGCTATTGAAGGATGCGTTGGTT TTATACTGTCGGTGGAAATTGGCGCAGACACACCGACGCCGCAAGGTGCTGAACTACGATCGTTCGAAGAAGCGG GTCGGGAAGGCTGGTAGTTGA |
Gene | >Ani_SJS100_1|g8900.t1 ATGGCTTCCCTCCCAGGTTATTCGGCCTCTAGTCGGCCACAATCATCTGATAATAATACTACCTCCACTACTCAA CAGAACAGCGTATCCACGAATATAACCAGCAGCGCTTCATCAACGGAATCATTTGAAACTAGCGATACCGTCCTG CTCAACGGCACCTCGGATACCGCCACCGCCCGTGGCTCCCCGACGAGTCCGACCCTCGCCGATGCGTCTGGTGAG GAACCACGCAGATGTTGGATTTGCTATACAGATGAGACCGAGGACTCTCCCCTCAATTCACAATGGCGCTCGCCA TGTCCTTGCGCCTTGACCGCCCACGAAGCTTGCCTGCTCGACTGGTTGGCGGATCTCGAGAATCCCCGATCGCGG AGGCGCAACGGCCATGACGCAAAGATGCTGTGTCCGCAATGCAAGACTGAAATTATCGTTTCCCGTCCCCGAAGC TATATTGTGGATGTAGTGCGACTGGTTGAACGCCTCGCGGGTCGGATGGTTCTTCCAGGAATGGTATTTACGTTG GGGGCAACCGTGTGGGCGGGGTGCTGTGCGCACGGAGTATACTCGATGTATTTTGTCTTTGGGACAGACGAGGCT CGCCAGATCTTGGAGGAAACGGCAGATGGGGCATGGAATTCGGGGCTTAACCTGGGCTTGCCCCTCATCCCGCTC GTGTTGATCTTCTCGCGCACTCGGTATGCAGATGGTCTTCTCCCCGCCATCCCCGTGATGTTCTTTGCCACACAT CAACCCGGACAGGAGCTGGAGTTGGATCTCTGGCCGCCCAGTGCGGCAGTCACGTTTGCCGCTCTTCCGTATCTG AAAAGCTTTTACGGCAGTATCTACGAGAGAATGTTCGGCAAGTTGGAGCGGAGGTGGATTGCGGAAGTACAACCG CGCCAGTCGGATGTCAATGAGTTTGATGATAATGCGCCGCCCGAACATCCCGAGCCAGACCCACCTAATGATGAC AACGGTGTTCTGATGGAGATCGATTTGGAGCTACGCATGGGCAACGAAGATGGGCCGCAGGGCTTGTTCGGCTTT AATGGAGGAAATGCGCAGGGTGGACAAGGGCAGAACCAGGGTGGAAACGGCCAACCCTTGGGCTTGGGACGACGG GATGAGCTGGTAGCCGACACAAGCAGTCTGGCGGATATCATCCTCGGAGCACTTGCGTTTCCCGCCATATCTGCG TCGATGGGCGGGCTGTTGAAGTACCTCTTGCCAACTTCATGGACGACGCCATCTACTCTGGGAAAGGTCCGACCA GGACTGCTGCAGACCCGCTGGGGCCGGAGCGTAGTTGGCGGATGTGCGTTTGTGCTATTGAAGGATGCGTTGGTT TTATACTGTCGGTGGAAATTGGCGCAGACACACCGACGCCGCAAGGTGCTGAACTACGATCGTTCGAAGAAGCGG GTCGGGAAGGCTGGTAGTTGA |