Protein ID | Ani_SJS100_1|g8812.t1 |
Gene name | |
Location | scaffold_072:166905..168682 |
Strand | + |
Gene length (bp) | 1777 |
Transcript length (bp) | 1707 |
Coding sequence length (bp) | 1707 |
Protein length (aa) | 569 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 3.4E-40 | 202 | 444 |
PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 3.2E-10 | 200 | 416 |
PF00550 | PP-binding | Phosphopantetheine attachment site | 4.8E-06 | 80 | 119 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8812.t1 MIWPIVQAANKTVPDYGQIVKTMIRLSSREKPFKLTAKGTTQRHAVNKDYAEEIEEIYATQDRQLVIGLPSAITP DTVHEYLQNVICKLTGRKSIEPNDDLYSMGLDSLQAIQLSKILTNSVFSYNPELNTEHLNVQQIYAHPTAEGLTN ILLGILDKSSSPIATVSRSYKIAQLITKYTNDLQTRKSDILPQLPGLFTVILTGSTGSLGSYILDDLLRNPQVAK VYCFNRSEDSPTRQKEGFQEKGLQTSPLDDPNKVQFLHVRFGEPQFGLSDRQYKELLDTVDVIIHNAWKVNFNHP VSSFEDPHLKGVRELVRFSQESRYQAHLAFVSSVSTIGAWKPSDEVTAVPEVPMETADAALEQGYGESKYIGESI CVEASKTAGVPTSILRVGQIAGPDTRLGVWNPHEWIPSLIKTSKAMGKVPSDLGGYPIDWVSVDTLAQIVNELVL GRRVSLAETRNAVFHLVNPCRTTWASLVPAIQERYPVQPVSLVNWVADLETIQDPSDRDVQDKPALKLLAFFHSL AENADVLSADISVERSKKGSKTMASLSSVSPAQMANWLNQWNF* |
Coding | >Ani_SJS100_1|g8812.t1 ATGATTTGGCCAATAGTTCAGGCAGCTAACAAGACCGTTCCTGATTACGGCCAGATCGTGAAAACCATGATCCGC CTTTCATCTCGCGAGAAACCCTTCAAACTCACCGCGAAAGGTACTACACAACGACATGCCGTGAATAAGGATTAT GCCGAGGAGATTGAGGAGATTTACGCTACCCAAGATAGGCAACTGGTGATAGGCCTGCCATCAGCGATCACCCCG GACACTGTCCACGAGTATCTACAAAACGTTATCTGCAAGCTTACTGGGAGGAAAAGCATCGAACCCAATGACGAC CTCTACAGCATGGGCCTGGACTCACTCCAGGCAATTCAGTTGAGCAAGATTCTGACAAATTCGGTCTTCTCCTAC AATCCGGAGTTGAACACCGAGCATCTCAATGTCCAGCAGATCTATGCGCACCCAACTGCAGAGGGACTCACTAAT ATACTGTTGGGGATCCTTGACAAATCATCGAGTCCAATCGCTACTGTATCTCGTTCTTATAAGATTGCGCAGTTA ATTACCAAGTATACGAATGATCTTCAAACTCGAAAATCTGATATCCTTCCTCAACTGCCGGGCTTATTCACTGTC ATTCTCACTGGATCCACTGGATCGTTGGGCAGCTATATTCTTGACGACCTACTGCGCAATCCCCAGGTAGCAAAG GTCTACTGTTTCAACCGAAGCGAAGATTCTCCGACGCGCCAGAAGGAAGGCTTCCAAGAAAAAGGACTGCAGACT TCTCCTCTGGATGATCCCAACAAGGTCCAGTTCCTGCATGTCCGCTTCGGAGAACCCCAATTTGGCCTCTCCGAC CGACAATACAAGGAGCTCCTCGACACGGTTGACGTGATTATCCACAATGCATGGAAGGTCAACTTTAACCATCCC GTGTCCTCCTTCGAGGACCCGCACCTCAAGGGTGTCCGGGAGCTCGTGCGCTTCAGCCAGGAGAGCCGCTACCAG GCCCATCTTGCCTTCGTCTCCTCAGTCAGCACGATTGGGGCCTGGAAGCCCAGCGATGAGGTCACGGCCGTCCCC GAAGTTCCGATGGAGACGGCGGACGCCGCGCTGGAGCAGGGATACGGAGAGTCCAAGTATATCGGGGAGAGCATC TGCGTGGAGGCTTCGAAGACGGCCGGCGTGCCGACCAGTATCCTGCGCGTGGGACAGATCGCGGGTCCAGACACG CGATTGGGAGTGTGGAATCCGCACGAGTGGATCCCCTCATTGATTAAGACATCAAAGGCGATGGGCAAAGTGCCG TCTGATCTCGGGGGGTACCCCATCGACTGGGTGTCAGTGGATACCCTAGCGCAAATTGTAAACGAACTCGTCCTC GGCCGCCGTGTCTCGCTCGCGGAAACCCGCAACGCAGTCTTCCATCTGGTTAATCCATGCCGGACCACCTGGGCT TCTCTCGTCCCTGCGATCCAAGAGCGATACCCCGTCCAGCCCGTGTCTCTCGTCAACTGGGTCGCCGATCTCGAA ACCATCCAAGATCCATCCGATCGCGACGTGCAAGACAAACCCGCACTGAAGCTCCTAGCCTTCTTCCATAGCCTG GCGGAAAACGCGGATGTCTTGTCTGCGGACATCAGCGTCGAACGGTCGAAGAAGGGGAGTAAAACAATGGCATCA CTCAGTTCGGTGTCACCTGCTCAGATGGCCAATTGGCTGAATCAGTGGAACTTTTAG |
Transcript | >Ani_SJS100_1|g8812.t1 ATGATTTGGCCAATAGTTCAGGCAGCTAACAAGACCGTTCCTGATTACGGCCAGATCGTGAAAACCATGATCCGC CTTTCATCTCGCGAGAAACCCTTCAAACTCACCGCGAAAGGTACTACACAACGACATGCCGTGAATAAGGATTAT GCCGAGGAGATTGAGGAGATTTACGCTACCCAAGATAGGCAACTGGTGATAGGCCTGCCATCAGCGATCACCCCG GACACTGTCCACGAGTATCTACAAAACGTTATCTGCAAGCTTACTGGGAGGAAAAGCATCGAACCCAATGACGAC CTCTACAGCATGGGCCTGGACTCACTCCAGGCAATTCAGTTGAGCAAGATTCTGACAAATTCGGTCTTCTCCTAC AATCCGGAGTTGAACACCGAGCATCTCAATGTCCAGCAGATCTATGCGCACCCAACTGCAGAGGGACTCACTAAT ATACTGTTGGGGATCCTTGACAAATCATCGAGTCCAATCGCTACTGTATCTCGTTCTTATAAGATTGCGCAGTTA ATTACCAAGTATACGAATGATCTTCAAACTCGAAAATCTGATATCCTTCCTCAACTGCCGGGCTTATTCACTGTC ATTCTCACTGGATCCACTGGATCGTTGGGCAGCTATATTCTTGACGACCTACTGCGCAATCCCCAGGTAGCAAAG GTCTACTGTTTCAACCGAAGCGAAGATTCTCCGACGCGCCAGAAGGAAGGCTTCCAAGAAAAAGGACTGCAGACT TCTCCTCTGGATGATCCCAACAAGGTCCAGTTCCTGCATGTCCGCTTCGGAGAACCCCAATTTGGCCTCTCCGAC CGACAATACAAGGAGCTCCTCGACACGGTTGACGTGATTATCCACAATGCATGGAAGGTCAACTTTAACCATCCC GTGTCCTCCTTCGAGGACCCGCACCTCAAGGGTGTCCGGGAGCTCGTGCGCTTCAGCCAGGAGAGCCGCTACCAG GCCCATCTTGCCTTCGTCTCCTCAGTCAGCACGATTGGGGCCTGGAAGCCCAGCGATGAGGTCACGGCCGTCCCC GAAGTTCCGATGGAGACGGCGGACGCCGCGCTGGAGCAGGGATACGGAGAGTCCAAGTATATCGGGGAGAGCATC TGCGTGGAGGCTTCGAAGACGGCCGGCGTGCCGACCAGTATCCTGCGCGTGGGACAGATCGCGGGTCCAGACACG CGATTGGGAGTGTGGAATCCGCACGAGTGGATCCCCTCATTGATTAAGACATCAAAGGCGATGGGCAAAGTGCCG TCTGATCTCGGGGGGTACCCCATCGACTGGGTGTCAGTGGATACCCTAGCGCAAATTGTAAACGAACTCGTCCTC GGCCGCCGTGTCTCGCTCGCGGAAACCCGCAACGCAGTCTTCCATCTGGTTAATCCATGCCGGACCACCTGGGCT TCTCTCGTCCCTGCGATCCAAGAGCGATACCCCGTCCAGCCCGTGTCTCTCGTCAACTGGGTCGCCGATCTCGAA ACCATCCAAGATCCATCCGATCGCGACGTGCAAGACAAACCCGCACTGAAGCTCCTAGCCTTCTTCCATAGCCTG GCGGAAAACGCGGATGTCTTGTCTGCGGACATCAGCGTCGAACGGTCGAAGAAGGGGAGTAAAACAATGGCATCA CTCAGTTCGGTGTCACCTGCTCAGATGGCCAATTGGCTGAATCAGTGGAACTTTTAG |
Gene | >Ani_SJS100_1|g8812.t1 ATGATTTGGCCAATAGTTCAGGCAGCTAACAAGACCGTTCCTGATTACGGCCAGATCGTGAAAACCATGATCCGC CTTTCATCTCGCGAGAAACCCTTCAAACTCACCGCGAAAGGTACTACACAACGACATGCCGTGAATAAGGATTAT GCCGAGGAGATTGAGGAGATTTACGCTACCCAAGATAGGCAACTGGTGATAGGCCTGCCATCAGCGATCACCCCG GACACTGTCCACGAGTATCTACAAAACGTTATCTGCAAGCTTACTGGGAGGAAAAGCATCGAACCCAATGACGAC CTCTACAGCATGGGCCTGGACTCACTCCAGGCAATTCAGTTGAGCAAGATTCTGACAAATTCGGTCTTCTCCTAC AATCCGGAGTTGAACACCGAGCATCTCAATGTCCAGCAGATCTATGCGCACCCAACTGCAGAGGGACTCACTAAT ATACTGTTGGGGATCCTTGACAAATCATCGAGTCCAATCGCTACTGTATCTCGTTCTTATAAGATTGCGCAGTTA ATTACCAAGTATACGAATGATCTTCAAACTCGAAAATCTGATATCCTTCCTCAACTGCCGGGCTTATTCACTGTC ATTCTCACTGGATCCACTGGATCGTTGGGCAGCTATATTCTTGACGACCTACTGCGCAATCCCCAGGTAGCAAAG GTCTACTGTTTCAACCGAAGCGAAGATTCTCCGACGCGCCAGAAGGAAGGCTTCCAAGAAAAAGGACTGCAGACT TCTCCTCTGGATGATCCCAACAAGGTCCAGTTCCTGCATGTCCGCTTCGGAGAACCCCAATTTGGCCTCTCCGAC CGACAATACAAGGAGCTCCTCGACACGGTTGACGTGATTATCCACAATGCATGGAAGGTCAACTTTAACCATCCC GTGTCCTCCTTCGAGGACCCGCACCTCAAGGGTGTCCGGGAGCTCGTGCGCTTCAGCCAGGAGAGCCGCTACCAG GCCCATCTTGCCTTCGTCTCCTCAGTCAGCACGATTGGGGCCTGGAAGCCCAGCGATGAGGTCACGGCCGTCCCC GAAGTTCCGATGGAGACGGCGGACGCCGCGCTGGAGCAGGGATACGGAGAGTCCAAGTATATCGGGGAGAGCATC TGCGTGGAGGCTTCGAAGACGGCCGGCGTGCCGACCAGTATCCTGCGCGTGGGACAGATCGCGGGTCCAGACACG CGATTGGGAGTGTGGAATCCGCACGAGTGGATCCCCTCATTGATTAAGACATCAAAGGCGATGGGCAAAGTGCCG TCTGATCTCGGGGGGTACCCCATCGACTGGGTGTCAGTGGTACGCACCTGGCTCTATCTTCTACTGTCTGACCCC ATCCGTAGAGAATGTCACTGACTAATTGAACCAGGATACCCTAGCGCAAATTGTAAACGAACTCGTCCTCGGCCG CCGTGTCTCGCTCGCGGAAACCCGCAACGCAGTCTTCCATCTGGTTAATCCATGCCGGACCACCTGGGCTTCTCT CGTCCCTGCGATCCAAGAGCGATACCCCGTCCAGCCCGTGTCTCTCGTCAACTGGGTCGCCGATCTCGAAACCAT CCAAGATCCATCCGATCGCGACGTGCAAGACAAACCCGCACTGAAGCTCCTAGCCTTCTTCCATAGCCTGGCGGA AAACGCGGATGTCTTGTCTGCGGACATCAGCGTCGAACGGTCGAAGAAGGGGAGTAAAACAATGGCATCACTCAG TTCGGTGTCACCTGCTCAGATGGCCAATTGGCTGAATCAGTGGAACTTTTAG |