© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8806.t1 |
| Gene name | |
| Location | scaffold_072:147711..149360 |
| Strand | - |
| Gene length (bp) | 1649 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1281 |
| Protein length (aa) | 427 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05730 | CFEM | CFEM domain | 3.5E-12 | 30 | 90 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 23 | 19 |
| 2 | 99 | 121 | 22 |
| 3 | 187 | 209 | 22 |
| 4 | 216 | 238 | 22 |
| 5 | 263 | 285 | 22 |
| 6 | 298 | 320 | 22 |
| 7 | 335 | 357 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8806.t1 MRVLGAVALGVALLSTTIAAASVKELGALLPTCAVKCMAVTIPKTSCTLADQTCQCTDETYTALLQECVVSSCTT KESLTTKNVTSTACGAPVRDRTKAVSYAGVIGLVIACIAFILRIVARFKCLGVSGDTSFSTISLADTGLGKDMWT LPFENVTRILYVSFPCYPSVRGKADILEHYKIYFWDELLYLSILPMTKISICCFYLRIFPARNFRSLTYIVIGLN IAYLLAFVLVSIFQCRPIQGAWLHWDGEGNYKCNHINAQGWASAIINMLLDLIVMILPLKQLYELQLSIKKKAFV MCMFSLGIFVTVVSILRLDSLINFASTDNVTWDYVTVGYWSTIECHVGVICACLPAIRSLLRTTAPKLFGDTSLN KSSGMNSTSRGTGSRLEGAFHVRSKHDDQDFLPLVDMDHSSQIELHPNPKG* |
| Coding | >Ani_SJS100_1|g8806.t1 ATGCGTGTGTTGGGCGCAGTAGCGCTGGGCGTCGCCCTGCTATCAACGACTATAGCGGCTGCTAGTGTGAAAGAG CTGGGGGCATTGTTGCCCACATGTGCGGTGAAATGCATGGCTGTCACTATACCGAAGACGTCCTGTACCCTCGCA GACCAGACATGCCAGTGTACGGATGAAACCTACACCGCTCTTTTGCAGGAATGTGTGGTGTCTAGCTGTACCACC AAAGAGTCGTTGACTACGAAAAATGTCACATCCACTGCGTGCGGAGCTCCGGTACGAGATAGAACCAAGGCTGTT TCATATGCAGGAGTCATCGGTCTCGTCATAGCATGTATCGCATTTATTCTCCGGATAGTCGCGAGGTTTAAGTGC CTCGGTGTGTCTGGTGATACCTCTTTCAGCACTATCAGTTTGGCCGACACGGGCTTAGGCAAAGACATGTGGACT CTTCCGTTTGAAAATGTTACCCGGATTCTATACGTTAGTTTCCCATGTTACCCCAGTGTCCGTGGTAAAGCTGAC ATTCTTGAACACTACAAGATTTACTTCTGGGATGAGTTGTTGTATCTCAGCATCCTGCCAATGACCAAGATCTCG ATATGTTGTTTCTACCTTCGTATCTTCCCCGCCAGAAACTTCCGAAGTTTGACTTATATTGTCATCGGTCTCAAC ATTGCATATTTACTTGCCTTTGTCTTGGTTTCAATTTTCCAGTGTCGACCAATCCAAGGAGCATGGCTTCACTGG GACGGAGAGGGTAATTACAAGTGCAACCATATTAACGCGCAGGGGTGGGCATCGGCAATCATCAACATGCTCCTT GACCTCATTGTCATGATTCTCCCGCTGAAACAGCTTTACGAGCTCCAGCTTTCCATCAAGAAGAAGGCTTTTGTC ATGTGCATGTTTAGCTTGGGTATCTTTGTTACTGTCGTGAGTATTCTGCGCCTGGATTCGCTTATCAACTTTGCT TCCACCGACAATGTGACGTGGGACTACGTCACAGTTGGATACTGGAGTACGATTGAATGCCATGTGGGCGTCATC TGTGCCTGTTTACCCGCCATTCGATCCTTGCTGCGCACAACGGCACCGAAGCTGTTTGGCGATACCAGCCTCAAT AAATCCTCCGGAATGAACTCGACATCACGGGGGACAGGATCTCGATTGGAGGGGGCGTTCCATGTCAGGAGCAAG CATGATGACCAAGATTTTCTACCGCTTGTAGACATGGACCACTCCAGTCAGATTGAGCTGCACCCGAACCCGAAG GGGTAG |
| Transcript | >Ani_SJS100_1|g8806.t1 ATGCGTGTGTTGGGCGCAGTAGCGCTGGGCGTCGCCCTGCTATCAACGACTATAGCGGCTGCTAGTGTGAAAGAG CTGGGGGCATTGTTGCCCACATGTGCGGTGAAATGCATGGCTGTCACTATACCGAAGACGTCCTGTACCCTCGCA GACCAGACATGCCAGTGTACGGATGAAACCTACACCGCTCTTTTGCAGGAATGTGTGGTGTCTAGCTGTACCACC AAAGAGTCGTTGACTACGAAAAATGTCACATCCACTGCGTGCGGAGCTCCGGTACGAGATAGAACCAAGGCTGTT TCATATGCAGGAGTCATCGGTCTCGTCATAGCATGTATCGCATTTATTCTCCGGATAGTCGCGAGGTTTAAGTGC CTCGGTGTGTCTGGTGATACCTCTTTCAGCACTATCAGTTTGGCCGACACGGGCTTAGGCAAAGACATGTGGACT CTTCCGTTTGAAAATGTTACCCGGATTCTATACGTTAGTTTCCCATGTTACCCCAGTGTCCGTGGTAAAGCTGAC ATTCTTGAACACTACAAGATTTACTTCTGGGATGAGTTGTTGTATCTCAGCATCCTGCCAATGACCAAGATCTCG ATATGTTGTTTCTACCTTCGTATCTTCCCCGCCAGAAACTTCCGAAGTTTGACTTATATTGTCATCGGTCTCAAC ATTGCATATTTACTTGCCTTTGTCTTGGTTTCAATTTTCCAGTGTCGACCAATCCAAGGAGCATGGCTTCACTGG GACGGAGAGGGTAATTACAAGTGCAACCATATTAACGCGCAGGGGTGGGCATCGGCAATCATCAACATGCTCCTT GACCTCATTGTCATGATTCTCCCGCTGAAACAGCTTTACGAGCTCCAGCTTTCCATCAAGAAGAAGGCTTTTGTC ATGTGCATGTTTAGCTTGGGTATCTTTGTTACTGTCGTGAGTATTCTGCGCCTGGATTCGCTTATCAACTTTGCT TCCACCGACAATGTGACGTGGGACTACGTCACAGTTGGATACTGGAGTACGATTGAATGCCATGTGGGCGTCATC TGTGCCTGTTTACCCGCCATTCGATCCTTGCTGCGCACAACGGCACCGAAGCTGTTTGGCGATACCAGCCTCAAT AAATCCTCCGGAATGAACTCGACATCACGGGGGACAGGATCTCGATTGGAGGGGGCGTTCCATGTCAGGAGCAAG CATGATGACCAAGATTTTCTACCGCTTGTAGACATGGACCACTCCAGTCAGATTGAGCTGCACCCGAACCCGAAG GGGTAG |
| Gene | >Ani_SJS100_1|g8806.t1 ATGCGTGTGTTGGGCGCAGTAGCGCTGGGCGTCGCCCTGCTATCAACGACTATAGCGGCTGCTAGTGTGAAAGAG CTGGGGGCATTGTTGCCCACATGTGCGGTAGGCGATATGATCACTACCCCGGGGTTGCGATACTGACCTTTTGTA GGTGAAATGCATGGCTGTCACTATACCGAAGACGTCCTGTACCCTCGCAGACCAGACATGCCAGTGTACGGATGA AACCTACACCGCTCTTTTGCAGGAATGTGTGGTGTCTAGCTGTACCACCAAAGAGTCGTTGAGTATGTTGCAAGT ACTTTCTTCTCCAAGTAGAGTCACTGATTCGATAGCTACGAAAAATGTCACATCCACTGCGTGCGGAGCTCCGGT ACGAGATAGAACCAAGGCTGTTTCATATGCAGGAGTCATCGGTCTCGTCATAGCATGTATCGCATTTATTCTCCG GATAGTCGCGAGGTTTAAGTGCCTCGGTGGTACGTTCGGGATGGACGATTTGACAATGGGACTGACCATGGTACA TACCCAGGACTCTCATAACTAATATTCTAATATACTGACAAATTACAGTGTCTGGTGATACCTCTTTCAGCACTA TCAGTTGTTTGTATGAACCTCCGTGGGTTATAATATATATGTTGCAAATGCCCTGACTACGTCATACAGTGGCCG ACACGGGCTTAGGCAAAGACATGTGGACTCTTCCGTTTGAAAATGTTACCCGGATTCTATACGTTAGTTTCCCAT GTTACCCCAGTGTCCGTGGTAAAGCTGACATTCTTGAACACTACAAGATTTACTTCTGGGATGAGTTGTTGTATC TCAGCATCCTGCCAATGACCAAGATCTCGATATGTTGTTTCTACCTTCGTATCTTCCCCGCCAGAAACTTCCGAA GTTTGACTTATATTGTCATCGGTCTCAACATTGCATATTTACTTGCCTTTGTCTTGGTTTCAATTTTCCAGTGTC GACCAATCCAAGGAGCATGGCTTCACTGGGACGGAGAGGGTAATTACAAGTGCAACCATATTAACGCGCAGGGGT GGGCATCGGCAATCATCAACATGCTCCTTGACCTCATTGTCATGATTCTCCCGCTGAAACAGCTTTACGAGCTCC AGCTTTCCATCAAGAAGAAGGCTTTTGTCATGTGCATGTTTAGCTTGGGTATCTTGTACGTGTTCTTGGAACCCA CTCAACGGCTGATATCGCTAACTAGGAATCTTGAACAGTGTTACTGTCGTGAGTATTCTGCGCCTGGATTCGCTT ATCAACTTTGCTTCCACCGACAATGTGACGTGTAAGTGCTGATTGAATTATCCATCGTTGAAATTTGACTCACAA TTCACTTATCAGGGGACTACGTCACAGTTGGATACTGGAGTACGATTGAATGCCATGTGGGCGTCATCTGTGCCT GTTTACCCGCCATTCGATCCTTGCTGCGCACAACGGCACCGAAGCTGTTTGGCGATACCAGCCTCAATAAATCCT CCGGAATGAACTCGACATCACGGGGGACAGGATCTCGATTGGAGGGGGCGTTCCATGTCAGGAGCAAGCATGATG ACCAAGATTTTCTACCGCTTGTAGACATGGACCACTCCAGTCAGATTGAGCTGCACCCGAACCCGAAGGGGTAG |