© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g880.t1 |
| Gene name | |
| Location | scaffold_003:189628..193257 |
| Strand | - |
| Gene length (bp) | 3629 |
| Transcript length (bp) | 2553 |
| Coding sequence length (bp) | 2553 |
| Protein length (aa) | 851 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01544 | CorA | CorA-like Mg2+ transporter protein | 9.9E-18 | 718 | 816 |
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 3.0E-08 | 105 | 155 |
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 1.1E-07 | 103 | 158 |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | 9.0E-08 | 105 | 153 |
| PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | 1.9E-07 | 104 | 135 |
| PF13639 | zf-RING_2 | Ring finger domain | 2.5E-06 | 104 | 156 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030001 | metal ion transport | Yes |
| GO:0046872 | metal ion binding | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0046873 | metal ion transmembrane transporter activity | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0043167 | ion binding | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0043169 | cation binding | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0006812 | cation transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 767 | 789 | 22 |
| 2 | 799 | 816 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g880.t1 MNSASPRRRASVARHLSLEPSPSAPRRLSHGSIDALETSGHQRKRRRTSHPERQEDAPPDAVDLTTTEDMDPVSR TQAKQRADVILAQQSLDHNKGESVLLAYKCPVCMDTPVDATSTACGHLFCHKCIIDTLKFSEEQRSDMSGKGPRG TCPVCRKYLSRNDLPGPKRNLLCVCFSLTSVTQYGICQCLRVPFIAGTDPPLLSVPTTPTSSIDHIARMSIYSQD HAQSAAGLQSSQDIADIEANPRTPNPPISPTTKVPPSPPPETFTTAARLNSRETVRNRLRRSTTARSYYREDGAH DPNWQPGTEPGIDPSQPLPAYSTEWMASTPTELHGTSEITVVDFSQNEMRQYVLDNDTLEPFLAREREPWVQCRW INVNGLSWDAIRILGNEKGLHRLAVEDLINATNRTKVDWYSDHAYIVLKLQKLIKLKDDDSDSEDEEDENTHWTN ERKSSASSISLRRPTKRTLVLEALKDLFRPKTREDSPDERYPAKDAPSGKGRSTSKASNLDDGSNVRFTPRSIQR YRGGPNEDRIAFMERHAILAAKGLCVTLEQVSIFLHADNTVTSFFETSADDIEGPIVRRLSTPETMLRQSCDASM VVQAILDAIIDLAIPVTTAYQDAIGDLELEVLTDPDVDQSKSLYVLTSEIAILRNCMQPIATVINALRDHRSDPV HTPGLGVLRNVGTATPTNDWSPYIGTATPNLKSLSGSSVSISPMCHTYLGDALDHCITIVEGYDQMRRAADNMID LIFNTIGAYQNESMKQLTIVTCFYLPLTFLTGYFGMNFTSFAGIEHSDAYFWMIAVPFVFVTTIFLMRDKLQRYL VLLAQKRLITSSRRSRRRKRATERT* |
| Coding | >Ani_SJS100_1|g880.t1 ATGAATAGCGCATCTCCCAGGCGTCGGGCTTCAGTTGCTCGTCATCTTTCCCTAGAACCCTCACCCTCCGCTCCT CGTCGGCTATCCCATGGAAGCATAGACGCACTAGAAACCTCTGGCCACCAAAGGAAGCGCCGTCGGACCAGTCAT CCTGAGCGACAGGAGGATGCGCCCCCGGATGCAGTCGATCTTACAACCACCGAGGACATGGACCCTGTGTCGAGG ACGCAAGCCAAACAACGAGCAGACGTTATCCTCGCACAGCAGTCCCTAGATCATAACAAAGGGGAGTCTGTTCTA CTTGCATACAAGTGTCCCGTCTGCATGGACACCCCGGTTGATGCTACTAGTACTGCATGTGGGCATCTTTTCTGC CACAAGTGTATTATCGATACCTTGAAGTTCAGCGAAGAACAGCGGTCGGATATGTCTGGAAAAGGCCCCCGGGGC ACTTGCCCTGTGTGCAGAAAGTATCTCTCGCGCAACGACTTGCCCGGTCCAAAGAGGAACCTCCTCTGTGTTTGC TTCAGTCTCACCTCTGTGACTCAGTATGGCATATGTCAATGCTTGCGAGTGCCGTTCATTGCTGGCACCGATCCA CCCTTACTGAGTGTCCCGACAACACCCACCAGCAGCATTGACCACATTGCAAGGATGAGCATCTACTCGCAAGAT CATGCGCAGTCGGCAGCGGGGCTGCAGTCGTCTCAGGACATAGCTGATATTGAGGCTAATCCGCGCACCCCCAAT CCGCCCATATCCCCAACTACTAAGGTGCCGCCTTCGCCTCCCCCTGAAACTTTCACCACGGCCGCTAGGCTCAAC TCCCGTGAAACTGTCCGAAACCGACTTCGACGCTCCACCACCGCTCGCTCATACTATCGCGAAGATGGCGCGCAC GATCCGAATTGGCAGCCCGGCACGGAGCCAGGCATCGATCCAAGCCAGCCGCTTCCTGCTTATAGCACGGAATGG ATGGCATCAACACCCACAGAGCTTCACGGGACAAGTGAAATTACCGTTGTGGACTTTTCGCAAAATGAAATGAGG CAATATGTTCTGGACAATGATACCCTTGAACCGTTTCTTGCGCGGGAGAGAGAGCCTTGGGTACAATGCAGATGG ATCAACGTCAACGGACTTAGCTGGGATGCCATTAGAATCTTAGGTAACGAAAAAGGTCTGCATAGGCTTGCGGTT GAGGATCTAATCAACGCAACAAACCGCACAAAAGTCGACTGGTACTCCGATCATGCATATATCGTGCTGAAACTC CAGAAACTGATAAAACTCAAAGATGACGACAGTGATTCTGAGGATGAGGAAGATGAAAATACACACTGGACGAAT GAGCGCAAAAGTTCTGCAAGCAGTATATCTCTGAGAAGGCCTACTAAAAGAACACTAGTGTTGGAAGCATTGAAG GATCTTTTCCGGCCCAAAACCCGCGAGGACAGTCCCGATGAAAGATACCCAGCGAAAGATGCCCCCTCAGGTAAG GGGAGGTCTACTTCGAAGGCATCTAATCTTGATGATGGTTCTAACGTTAGGTTCACACCCCGGAGCATTCAACGT TACCGCGGTGGCCCGAACGAGGACCGGATAGCCTTCATGGAGCGCCATGCTATACTGGCGGCAAAGGGACTGTGT GTTACTCTGGAACAGGTCTCAATTTTCCTACATGCGGATAATACGGTGACTTCATTCTTTGAAACGAGTGCCGAT GATATTGAAGGTCCAATCGTCCGACGTCTCAGTACCCCGGAGACGATGTTGCGCCAATCGTGTGATGCTAGTATG GTTGTGCAAGCCATTCTCGATGCTATTATAGACTTGGCCATACCGGTAACCACAGCTTACCAAGACGCTATTGGC GACCTTGAGCTCGAGGTACTGACAGATCCAGACGTGGATCAGTCCAAAAGCCTGTACGTCCTCACTTCGGAAATA GCAATTCTCCGAAACTGCATGCAACCAATCGCAACTGTCATTAATGCCCTTCGTGACCACCGATCCGACCCTGTA CATACTCCTGGCTTGGGAGTGTTGAGGAATGTCGGAACCGCAACTCCTACAAATGATTGGAGTCCATACATTGGA ACGGCGACCCCAAACCTGAAAAGCCTGAGCGGATCGAGCGTTTCCATCAGTCCAATGTGTCATACATACCTGGGA GATGCGCTAGACCATTGTATAACTATTGTGGAGGGATATGATCAAATGAGAAGGGCTGCTGACAACATGATCGAC CTGATATTCAATACAATCGGCGCATATCAGAATGAGAGTATGAAGCAACTCACCATTGTGACATGCTTCTATCTT CCACTTACATTCCTAACGGGCTACTTTGGCATGAACTTCACCTCCTTCGCTGGCATAGAACATAGCGATGCATAC TTTTGGATGATTGCGGTTCCTTTTGTGTTCGTCACAACCATTTTCTTAATGCGCGACAAGCTGCAGCGTTACTTG GTGTTGCTTGCCCAGAAACGACTGATCACCAGTTCTAGGAGGAGCAGACGAAGAAAGAGAGCCACCGAGAGGACA TAA |
| Transcript | >Ani_SJS100_1|g880.t1 ATGAATAGCGCATCTCCCAGGCGTCGGGCTTCAGTTGCTCGTCATCTTTCCCTAGAACCCTCACCCTCCGCTCCT CGTCGGCTATCCCATGGAAGCATAGACGCACTAGAAACCTCTGGCCACCAAAGGAAGCGCCGTCGGACCAGTCAT CCTGAGCGACAGGAGGATGCGCCCCCGGATGCAGTCGATCTTACAACCACCGAGGACATGGACCCTGTGTCGAGG ACGCAAGCCAAACAACGAGCAGACGTTATCCTCGCACAGCAGTCCCTAGATCATAACAAAGGGGAGTCTGTTCTA CTTGCATACAAGTGTCCCGTCTGCATGGACACCCCGGTTGATGCTACTAGTACTGCATGTGGGCATCTTTTCTGC CACAAGTGTATTATCGATACCTTGAAGTTCAGCGAAGAACAGCGGTCGGATATGTCTGGAAAAGGCCCCCGGGGC ACTTGCCCTGTGTGCAGAAAGTATCTCTCGCGCAACGACTTGCCCGGTCCAAAGAGGAACCTCCTCTGTGTTTGC TTCAGTCTCACCTCTGTGACTCAGTATGGCATATGTCAATGCTTGCGAGTGCCGTTCATTGCTGGCACCGATCCA CCCTTACTGAGTGTCCCGACAACACCCACCAGCAGCATTGACCACATTGCAAGGATGAGCATCTACTCGCAAGAT CATGCGCAGTCGGCAGCGGGGCTGCAGTCGTCTCAGGACATAGCTGATATTGAGGCTAATCCGCGCACCCCCAAT CCGCCCATATCCCCAACTACTAAGGTGCCGCCTTCGCCTCCCCCTGAAACTTTCACCACGGCCGCTAGGCTCAAC TCCCGTGAAACTGTCCGAAACCGACTTCGACGCTCCACCACCGCTCGCTCATACTATCGCGAAGATGGCGCGCAC GATCCGAATTGGCAGCCCGGCACGGAGCCAGGCATCGATCCAAGCCAGCCGCTTCCTGCTTATAGCACGGAATGG ATGGCATCAACACCCACAGAGCTTCACGGGACAAGTGAAATTACCGTTGTGGACTTTTCGCAAAATGAAATGAGG CAATATGTTCTGGACAATGATACCCTTGAACCGTTTCTTGCGCGGGAGAGAGAGCCTTGGGTACAATGCAGATGG ATCAACGTCAACGGACTTAGCTGGGATGCCATTAGAATCTTAGGTAACGAAAAAGGTCTGCATAGGCTTGCGGTT GAGGATCTAATCAACGCAACAAACCGCACAAAAGTCGACTGGTACTCCGATCATGCATATATCGTGCTGAAACTC CAGAAACTGATAAAACTCAAAGATGACGACAGTGATTCTGAGGATGAGGAAGATGAAAATACACACTGGACGAAT GAGCGCAAAAGTTCTGCAAGCAGTATATCTCTGAGAAGGCCTACTAAAAGAACACTAGTGTTGGAAGCATTGAAG GATCTTTTCCGGCCCAAAACCCGCGAGGACAGTCCCGATGAAAGATACCCAGCGAAAGATGCCCCCTCAGGTAAG GGGAGGTCTACTTCGAAGGCATCTAATCTTGATGATGGTTCTAACGTTAGGTTCACACCCCGGAGCATTCAACGT TACCGCGGTGGCCCGAACGAGGACCGGATAGCCTTCATGGAGCGCCATGCTATACTGGCGGCAAAGGGACTGTGT GTTACTCTGGAACAGGTCTCAATTTTCCTACATGCGGATAATACGGTGACTTCATTCTTTGAAACGAGTGCCGAT GATATTGAAGGTCCAATCGTCCGACGTCTCAGTACCCCGGAGACGATGTTGCGCCAATCGTGTGATGCTAGTATG GTTGTGCAAGCCATTCTCGATGCTATTATAGACTTGGCCATACCGGTAACCACAGCTTACCAAGACGCTATTGGC GACCTTGAGCTCGAGGTACTGACAGATCCAGACGTGGATCAGTCCAAAAGCCTGTACGTCCTCACTTCGGAAATA GCAATTCTCCGAAACTGCATGCAACCAATCGCAACTGTCATTAATGCCCTTCGTGACCACCGATCCGACCCTGTA CATACTCCTGGCTTGGGAGTGTTGAGGAATGTCGGAACCGCAACTCCTACAAATGATTGGAGTCCATACATTGGA ACGGCGACCCCAAACCTGAAAAGCCTGAGCGGATCGAGCGTTTCCATCAGTCCAATGTGTCATACATACCTGGGA GATGCGCTAGACCATTGTATAACTATTGTGGAGGGATATGATCAAATGAGAAGGGCTGCTGACAACATGATCGAC CTGATATTCAATACAATCGGCGCATATCAGAATGAGAGTATGAAGCAACTCACCATTGTGACATGCTTCTATCTT CCACTTACATTCCTAACGGGCTACTTTGGCATGAACTTCACCTCCTTCGCTGGCATAGAACATAGCGATGCATAC TTTTGGATGATTGCGGTTCCTTTTGTGTTCGTCACAACCATTTTCTTAATGCGCGACAAGCTGCAGCGTTACTTG GTGTTGCTTGCCCAGAAACGACTGATCACCAGTTCTAGGAGGAGCAGACGAAGAAAGAGAGCCACCGAGAGGACA TAA |
| Gene | >Ani_SJS100_1|g880.t1 ATGAATAGCGCATCTCCCAGGCGTCGGGCTTCAGTTGCTCGTCATCTTTCCCTAGAACCCTCACCCTCCGCTCCT CGTCGGCTATCCCATGGAAGCATAGACGCACTAGAAACCTCTGGCCACCAAAGGAAGCGCCGTCGGACCAGTCAT CCTGAGCGACAGGAGGATGCGCCCCCGGATGCAGTCGATCTTACAACCACCGAGGACATGGACCCTGTGTCGAGG ACGCAAGCCAAACAACGAGCAGACGTTATCCTCGCACAGCAGTCCCTAGATCATAACAAAGGGGAGTCTGTTCTA CTTGCATACAAGTGTCCCGTCTGCATGGACACCCCGGTTGATGCTACTAGTACTGCATGTGGTAAGTTTAATGCT GCGATATCGCATGCTACCTAGCTGACTCGATCAAGGGCATCTTTTCTGCCACAAGTGTATTATCGATACCTTGAA GTTCAGCGAAGAACAGCGGTCGGATATGTCTGGAAAAGGCCCCCGGGGCACTTGCCCTGTGTGCAGAAAGTATCT CTCGCGCAACGACTTGCCCGGTCCAAAGAGGAACCTCGTACCTCTACAGATCAAACTTACTACTCGAAAGAGGAG AGAGACCGCGCAATGAGCAGTCATCGCTAATATCAGTCAACGATCGTTCCATTCAGCAACTCCTAACTCGCTTTT GGAGGATCATGGTTACAGACGGGGAAAAAAATGACTTCAAGAGATGGAAGTAAAAATATGGCTGCCATTTACTTT CTCACATCATGGTTATGGGACCAGTCATCTCTATTGTTGAAGGCCCTACTCTTATGGAAAATCCATGAAGGGATA ACACCGGTGACTCCAGCTTCCTGGAATCTAAAAACCTTGGCGTGAACCTGTAAAAAGGGAACCAGGGCAAAGTTC GCCCTGTCACGGCGAAAATCAGATTACCCGACGACATCGGTACAGCGAATGTCTTCCTTTAAGCGTTCTCAGCAT ACTCTAGCATACTGTGTGGGGGTTGGGAAGATAGATTCTTGGGGAGTGGCCCGGAGAATACCACGGCTCTTGCAT AGACTAATAACGTTGCGCCCCGGCTTTAATAAATAAGCTTACAGAAGCCAAGACTGATCGTGCAGTAGTTAGTAG CTTGTCCATCCACTAATGAAATGAAGACTTTAACAACTCCCTATTGTGTTGTCTATTCCCTCCTTGTTCAAGCCG CGTTCTTGCTACTTTACTATCTGTCGATCTTTAGAATGCGGATTTCCTTGCCGGTGGAACAATTGGGTCCGTGTG GCGACGTCATACCCCCGCGAAGAGGAATCACGGTTTCGCGCTCTTTCCATCCTAGCCATTTTTCCCTTTTGCTCT CCCTCTCCTATCCAAAAAGCTTATATCCACTAGACTCTACCAGCTCTGTGTTTGCTTCAGTCTCACCTCTGTGAC TCAGTATGGCATATGTCAATGCTTGCGAGTGCCGTTCATTGCTGGCACCGATCCACCCTTACTGAGTGTCCCGAC AACACCCACCAGCAGCATTGACCACATTGCAAGGATGAGCATCTACTCGCAAGATCATGCGCAGTCGGCAGCGGG GCTGCAGTCGTCTCAGGACATAGCTGATATTGAGGCTAATCCGCGCACCCCCAATCCGCCCATATCCCCAACTAC TAAGGTGCCGCCTTCGCCTCCCCCTGAAACTTTCACCACGGCCGCTAGGCTCAACTCCCGTGAAACTGTCCGAAA CCGACTTCGACGCTCCACCACCGCTCGCTCATACTATCGCGAAGATGGCGCGCACGATCCGAATTGGCAGCCCGG CACGGAGCCAGGCATCGATCCAAGCCAGCCGCTTCCTGCTTATAGCACGGAATGGATGGCATCAACACCCACAGA GCTTCACGGGACAAGTGAAATTACCGTTGTGGACTTTTCGCAAAATGAAATGAGGCAATATGTTCTGGACAATGA TACCCTTGAACCGTTTCTTGCGCGGGAGAGAGAGCCTTGGGTACAATGCAGATGGATCAACGTCAACGGACTTAG CTGGGATGCCATTAGAATCTTAGGTAACGAAAAAGGTCTGCATAGGCTTGCGGTTGAGGATCTAATCAACGCAAC AAACCGCACAAAAGTCGACTGGTACTCCGATCATGCATATATCGTGCTGAAACTCCAGAAACTGATAAAACTCAA AGATGACGACAGTGATTCTGAGGATGAGGAAGATGAAAATACACACTGGACGAATGAGCGCAAAAGTTCTGCAAG CAGTATATCTCTGAGAAGGCCTACTAAAAGAACACTAGTGTTGGAAGCATTGAAGGATCTTTTCCGGCCCAAAAC CCGCGAGGACAGTCCCGATGAAAGATACCCAGCGAAAGATGCCCCCTCAGGTAAGGGGAGGTCTACTTCGAAGGC ATCTAATCTTGATGATGGTTCTAACGTTAGGTTCACACCCCGGAGCATTCAACGTTACCGCGGTGGCCCGAACGA GGACCGGATAGCCTTCATGGAGCGCCATGCTATACTGGCGGCAAAGGGACTGTGTGTTACTCTGGAACAGGTCTC AATTTTCCTACATGCGGATAATACGGTGACTTCATTCTTTGAAACGAGTGCCGATGATATTGAAGGTCCAATCGT CCGACGTCTCAGTACCCCGGAGACGATGTTGCGCCAATCGTGTGATGCTAGTATGGTTGTGCAAGCCATTCTCGA TGCTATTATAGACTTGGCCATACCGGTAACCACAGCTTACCAAGACGCTATTGGCGACCTTGAGCTCGAGGTACT GACAGATCCAGACGTGGATCAGTCCAAAAGCCTGTACGTCCTCACTTCGGAAATAGCAATTCTCCGAAACTGCAT GCAACCAATCGCAACTGTCATTAATGCCCTTCGTGACCACCGATCCGACCCTGTACATACTCCTGGCTTGGGAGT GTTGAGGAATGTCGGAACCGCAACTCCTACAAATGATTGGAGTCCATACATTGGAACGGCGACCCCAAACCTGAA AAGCCTGAGCGGATCGAGCGTTTCCATCAGTCCAATGTGTCATACATACCTGGGAGATGCGCTAGACCATTGTAT AACTATTGTGGAGGGATATGATCAAATGAGAAGGGCTGCTGACAACATGATCGACCTGATATTCAATACAATCGG TGAGTTCAATCTCTGCCATCGAAAAATTTCATCTGAAGCTTACAGTATCTAGGCGCATATCAGAATGAGAGTATG AAGCAACTCACCATTGTGACATGCTTCTATCTTCCACTTACATTCCTAACGGTGCGTGTTCTTTCGCTTGCATAA GATGCTCATCTGACTGTAAATCAGGGCTACTTTGGCATGAACTTCACCTCCTTCGCTGGCATAGAACATAGCGAT GCGTATGTCTCTCTATCCACCCTGTAGCAATGGCTGACTCAAACTGCAGATACTTTTGGATGATTGCGGTTCCTT TTGTGTTCGTCACAACCATTTTCTTAATGTAAGTCCTACTTTGGCGTCAGACGGCAGCACCACTAACCCTCCACA GGCGCGACAAGCTGCAGCGTTACTTGGTGTTGCTTGCCCAGAAACGACTGATCACCAGTTCTAGGAGGAGCAGAC GAAGAAAGAGAGCCACCGAGAGGACATAA |