© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8788.t1 |
| Gene name | |
| Location | scaffold_072:100808..101663 |
| Strand | - |
| Gene length (bp) | 855 |
| Transcript length (bp) | 798 |
| Coding sequence length (bp) | 798 |
| Protein length (aa) | 266 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06966 | DUF1295 | Protein of unknown function (DUF1295) | 1.8E-09 | 120 | 213 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 73 | 95 | 22 |
| 2 | 105 | 127 | 22 |
| 3 | 140 | 162 | 22 |
| 4 | 203 | 225 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8788.t1 MPSNSLRDNVSRRKDASPLGRGIFIGLRALDVWWQHHLLTRGWATRAIETLGGQAVSTSHIISSTNFTGLQPYYG LVNLLSLGSSIKQIATMIFISEQETPVASAIIVAAFNTIINSVNTLLSVWAVTSQVPSTLSSNNSSNFLLASPLV AVGAGAYLIGILTEAVSEFQRTAFKKDPANKGKPYGGGLFSLATNINYGGYTIWRAGYALVTGGLPLAAINFSFF FYDFAARGVPVLDAYLTDRYGDEYKEIKSRVKYRLFPGIY* |
| Coding | >Ani_SJS100_1|g8788.t1 ATGCCTTCAAATTCCCTGCGCGATAACGTCTCCCGCCGCAAGGATGCCTCTCCCCTCGGCAGAGGTATCTTCATC GGGCTTCGTGCCCTAGATGTCTGGTGGCAACACCATCTACTCACCCGCGGATGGGCTACACGAGCCATCGAAACG CTTGGGGGTCAAGCAGTCTCAACAAGCCATATTATATCTTCTACCAATTTTACGGGCCTTCAACCTTACTACGGT CTCGTGAACCTGCTCTCCCTTGGCAGCAGCATCAAGCAGATTGCGACCATGATCTTCATTTCCGAGCAAGAGACC CCCGTGGCCTCCGCCATCATTGTCGCCGCATTCAACACTATCATCAACTCCGTGAACACTCTTCTGTCTGTTTGG GCCGTGACCTCCCAAGTGCCCAGCACCCTATCTTCCAACAACTCTTCCAACTTCTTACTCGCGAGTCCTCTCGTT GCCGTGGGCGCAGGCGCATACCTCATCGGCATCCTAACTGAAGCAGTCTCCGAATTCCAACGGACAGCTTTCAAG AAAGACCCCGCCAACAAAGGCAAGCCTTATGGTGGCGGACTGTTCTCCCTTGCCACAAACATCAACTACGGTGGA TATACTATTTGGCGTGCTGGCTATGCCCTGGTCACTGGCGGTCTGCCTCTGGCGGCTATAAACTTTTCTTTCTTC TTCTACGACTTTGCGGCCCGTGGGGTCCCGGTGCTAGACGCGTATTTGACGGACAGGTACGGTGACGAGTACAAG GAGATTAAGTCGCGCGTGAAATATCGTCTCTTTCCAGGGATTTATTGA |
| Transcript | >Ani_SJS100_1|g8788.t1 ATGCCTTCAAATTCCCTGCGCGATAACGTCTCCCGCCGCAAGGATGCCTCTCCCCTCGGCAGAGGTATCTTCATC GGGCTTCGTGCCCTAGATGTCTGGTGGCAACACCATCTACTCACCCGCGGATGGGCTACACGAGCCATCGAAACG CTTGGGGGTCAAGCAGTCTCAACAAGCCATATTATATCTTCTACCAATTTTACGGGCCTTCAACCTTACTACGGT CTCGTGAACCTGCTCTCCCTTGGCAGCAGCATCAAGCAGATTGCGACCATGATCTTCATTTCCGAGCAAGAGACC CCCGTGGCCTCCGCCATCATTGTCGCCGCATTCAACACTATCATCAACTCCGTGAACACTCTTCTGTCTGTTTGG GCCGTGACCTCCCAAGTGCCCAGCACCCTATCTTCCAACAACTCTTCCAACTTCTTACTCGCGAGTCCTCTCGTT GCCGTGGGCGCAGGCGCATACCTCATCGGCATCCTAACTGAAGCAGTCTCCGAATTCCAACGGACAGCTTTCAAG AAAGACCCCGCCAACAAAGGCAAGCCTTATGGTGGCGGACTGTTCTCCCTTGCCACAAACATCAACTACGGTGGA TATACTATTTGGCGTGCTGGCTATGCCCTGGTCACTGGCGGTCTGCCTCTGGCGGCTATAAACTTTTCTTTCTTC TTCTACGACTTTGCGGCCCGTGGGGTCCCGGTGCTAGACGCGTATTTGACGGACAGGTACGGTGACGAGTACAAG GAGATTAAGTCGCGCGTGAAATATCGTCTCTTTCCAGGGATTTATTGA |
| Gene | >Ani_SJS100_1|g8788.t1 ATGCCTTCAAATTCCCTGCGCGATAACGTCTCCCGCCGCAAGGATGCCTCTCCCCTCGGCAGAGGTATCTTCATC GGGCTTCGTGCCCTAGATGTCTGGTGGCAACACCATCTACTCACCCGCGGATGGGCTACACGAGCCATCGAAACG CTTGGGGGTCAAGCAGTCTCAACAAGCCATATTATATCTTCTACCAATTTTACGGGCCTTCAACCTTACTACGGT CTCGTGAACCTGCTCTCCCTTGGCAGCAGCATCAAGCAGATTGCGACCATGATCTTCATTTCCGAGCAAGAGACC CCCGTGGCCTCCGCCATCATTGTCGCCGCATTCAACACTATCATCAACTCCGTGAACACTCTTCTGTCTGTTTGG GCCGTGACCTCCCAAGTGCCCAGCACCCTATCTTCCAACAACTCTTCCAACTTCTTACTCGCGAGTCCTCTCGTT GCCGTGGGCGCAGGCGCATACCTCATCGGCATCCTAACTGAAGCAGTCTCCGAATTCCAACGGACAGCTTTCAAG AAAGACCCCGCCAACAAAGGCAAGCCTTATGGTGGCGGACTGTTCTCCCTTGCCACAAACATCAACTACGGTGGA TATACTATTTGGCGTGCTGGCTATGCCCTGGTCACTGGCGGTCTGCCTCTGGCGGCTATAAACTTTTCTTTCTTC TTCTACGACTTTGCGGCCCGTGGGGTCCCGGTGCTAGACGCGTATTTGACGGACAGGGTAAGACTTCTTTAACGT TGACTAAAAGAAGAAGAAAGGCTAATGGTCGATATCTAGTACGGTGACGAGTACAAGGAGATTAAGTCGCGCGTG AAATATCGTCTCTTTCCAGGGATTTATTGA |