Protein ID | Ani_SJS100_1|g8776.t1 |
Gene name | |
Location | scaffold_072:54160..55193 |
Strand | - |
Gene length (bp) | 1033 |
Transcript length (bp) | 870 |
Coding sequence length (bp) | 870 |
Protein length (aa) | 290 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12138 | Spherulin4 | Spherulation-specific family 4 | 1.5E-69 | 48 | 286 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH135 | 1.2E-85 | 48 | 282 |
Orthofinder run ID | 3 |
Orthogroup | 8918 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8776.t1 MPRPNLTRPRRPWCIAISIAIALVIIIVIVVPCAVILTRKHGGEKTNVLFPLYIYPTNDSTWDPLYESVTAHPDL NFTVIINPSSGPGSSAYPSEEYTSSVERLSTYSNVRKVGYVRTAYATRNITDVLDDVATYAGWANRSLTLAMDGI FFDEAPYDYSATKVEYMQTISEAVKSSSGLGRDRMVIHNPGTIPDSRYENNATDVTVVFESSYQDFHSEKHSLNA MASNRTAYAYMLHSVPDSLSNSTLRSFVNQMSRKAEYLFLTTLTEDYYESFDPEGETICDVMPT* |
Coding | >Ani_SJS100_1|g8776.t1 ATGCCTCGCCCTAATCTTACGCGCCCCCGGCGGCCTTGGTGCATCGCCATTTCCATTGCCATTGCCCTAGTGATC ATTATTGTCATTGTTGTCCCCTGTGCAGTCATATTGACTCGCAAGCATGGTGGTGAAAAGACGAATGTTCTGTTC CCACTATACATCTACCCCACCAATGACAGTACATGGGATCCTTTATATGAATCGGTCACGGCGCACCCGGACCTG AACTTCACGGTCATCATCAATCCGTCGAGCGGACCCGGCTCCAGTGCGTATCCCTCGGAGGAGTATACCTCCTCA GTGGAACGACTTAGCACATATTCCAATGTACGCAAGGTTGGATATGTGCGCACGGCTTATGCCACGCGCAACATC ACCGATGTGCTGGATGATGTCGCCACTTATGCCGGGTGGGCGAATCGATCGCTGACACTAGCGATGGATGGAATT TTCTTTGACGAAGCTCCCTATGACTACTCGGCAACAAAGGTTGAGTACATGCAGACGATCAGCGAGGCCGTCAAG AGTTCTTCGGGATTGGGCCGAGATCGCATGGTGATCCACAATCCCGGTACCATTCCGGATAGTCGCTACGAGAAC AACGCGACGGACGTCACAGTGGTGTTTGAGAGTTCCTACCAGGATTTTCACTCGGAGAAACACAGTCTGAACGCC ATGGCTTCGAATCGCACAGCATATGCGTATATGCTGCACTCGGTACCTGACAGTCTCAGCAACAGCACGTTGCGC AGTTTTGTCAACCAGATGAGCCGAAAGGCCGAGTATCTGTTCCTGACCACGTTGACGGAAGACTACTACGAGAGT TTCGATCCGGAGGGTGAGACCATCTGCGACGTGATGCCGACCTGA |
Transcript | >Ani_SJS100_1|g8776.t1 ATGCCTCGCCCTAATCTTACGCGCCCCCGGCGGCCTTGGTGCATCGCCATTTCCATTGCCATTGCCCTAGTGATC ATTATTGTCATTGTTGTCCCCTGTGCAGTCATATTGACTCGCAAGCATGGTGGTGAAAAGACGAATGTTCTGTTC CCACTATACATCTACCCCACCAATGACAGTACATGGGATCCTTTATATGAATCGGTCACGGCGCACCCGGACCTG AACTTCACGGTCATCATCAATCCGTCGAGCGGACCCGGCTCCAGTGCGTATCCCTCGGAGGAGTATACCTCCTCA GTGGAACGACTTAGCACATATTCCAATGTACGCAAGGTTGGATATGTGCGCACGGCTTATGCCACGCGCAACATC ACCGATGTGCTGGATGATGTCGCCACTTATGCCGGGTGGGCGAATCGATCGCTGACACTAGCGATGGATGGAATT TTCTTTGACGAAGCTCCCTATGACTACTCGGCAACAAAGGTTGAGTACATGCAGACGATCAGCGAGGCCGTCAAG AGTTCTTCGGGATTGGGCCGAGATCGCATGGTGATCCACAATCCCGGTACCATTCCGGATAGTCGCTACGAGAAC AACGCGACGGACGTCACAGTGGTGTTTGAGAGTTCCTACCAGGATTTTCACTCGGAGAAACACAGTCTGAACGCC ATGGCTTCGAATCGCACAGCATATGCGTATATGCTGCACTCGGTACCTGACAGTCTCAGCAACAGCACGTTGCGC AGTTTTGTCAACCAGATGAGCCGAAAGGCCGAGTATCTGTTCCTGACCACGTTGACGGAAGACTACTACGAGAGT TTCGATCCGGAGGGTGAGACCATCTGCGACGTGATGCCGACCTGA |
Gene | >Ani_SJS100_1|g8776.t1 ATGCCTCGCCCTAATCTTACGCGCCCCCGGCGGCCTTGGTGCATCGCCATTTCCATTGCCATTGCCCTAGTGATC ATTATTGTCATTGTTGTCCCCTGTGCAGTCATATTGACTCGCAAGCATGGTGGTGAAAAGACGAATGTTCTGTTC CCACTATACATCTACCCCACCAATGACAGTACATGGGATCCTTTATATGAATCGTATGTTGAACCTGAAACACCC ACGACCCCCGATTACATTGCGCACGGTGACTGACAGTCCCAGGGTCACGGCGCACCCGGACCTGAACTTCACGGT CATCATCAATCCGTCGAGCGGACCCGGCTCCAGTGCGTATCCCTCGGAGGAGTATACCTCCTCAGTGGAACGACT TAGCACATATTCCAATGTACGCAAGGTTGGATATGTGCGCACGGCTTATGCCACGCGCAACATCACCGATGTGCT GGATGATGTCGCCACTTATGCCGGGTGGGCGAATCGATCGCTGACACTAGCGATGGATGGAATTTTCTTTGACGA AGCTCCCTATGACTACTCGGCAACAAAGGTTGAGTACATGCAGACGATCAGCGAGGCCGTCAAGAGTTCTTCGGG ATTGGGCCGAGATCGCATGGTAAGCGAGACCGCGGTTCGGGTGCAGCAAGAGCGCAGAAAATTCTTTTGCTATGA CGATCCCAGTGGCTAACTTTTTTTTGGCGGATCTGCCCTTTAGGTGATCCACAATCCCGGTACCATTCCGGATAG TCGCTACGAGAACAACGCGACGGACGTCACAGTGGTGTTTGAGAGTTCCTACCAGGATTTTCACTCGGAGAAACA CAGTCTGAACGCCATGGCTTCGAATCGCACAGCATATGCGTATATGCTGCACTCGGTACCTGACAGTCTCAGCAA CAGCACGTTGCGCAGTTTTGTCAACCAGATGAGCCGAAAGGCCGAGTATCTGTTCCTGACCACGTTGACGGAAGA CTACTACGAGAGTTTCGATCCGGAGGGTGAGACCATCTGCGACGTGATGCCGACCTGA |