© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8776.t1 |
| Gene name | |
| Location | scaffold_072:54160..55193 |
| Strand | - |
| Gene length (bp) | 1033 |
| Transcript length (bp) | 870 |
| Coding sequence length (bp) | 870 |
| Protein length (aa) | 290 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12138 | Spherulin4 | Spherulation-specific family 4 | 1.5E-69 | 48 | 286 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8776.t1 MPRPNLTRPRRPWCIAISIAIALVIIIVIVVPCAVILTRKHGGEKTNVLFPLYIYPTNDSTWDPLYESVTAHPDL NFTVIINPSSGPGSSAYPSEEYTSSVERLSTYSNVRKVGYVRTAYATRNITDVLDDVATYAGWANRSLTLAMDGI FFDEAPYDYSATKVEYMQTISEAVKSSSGLGRDRMVIHNPGTIPDSRYENNATDVTVVFESSYQDFHSEKHSLNA MASNRTAYAYMLHSVPDSLSNSTLRSFVNQMSRKAEYLFLTTLTEDYYESFDPEGETICDVMPT* |
| Coding | >Ani_SJS100_1|g8776.t1 ATGCCTCGCCCTAATCTTACGCGCCCCCGGCGGCCTTGGTGCATCGCCATTTCCATTGCCATTGCCCTAGTGATC ATTATTGTCATTGTTGTCCCCTGTGCAGTCATATTGACTCGCAAGCATGGTGGTGAAAAGACGAATGTTCTGTTC CCACTATACATCTACCCCACCAATGACAGTACATGGGATCCTTTATATGAATCGGTCACGGCGCACCCGGACCTG AACTTCACGGTCATCATCAATCCGTCGAGCGGACCCGGCTCCAGTGCGTATCCCTCGGAGGAGTATACCTCCTCA GTGGAACGACTTAGCACATATTCCAATGTACGCAAGGTTGGATATGTGCGCACGGCTTATGCCACGCGCAACATC ACCGATGTGCTGGATGATGTCGCCACTTATGCCGGGTGGGCGAATCGATCGCTGACACTAGCGATGGATGGAATT TTCTTTGACGAAGCTCCCTATGACTACTCGGCAACAAAGGTTGAGTACATGCAGACGATCAGCGAGGCCGTCAAG AGTTCTTCGGGATTGGGCCGAGATCGCATGGTGATCCACAATCCCGGTACCATTCCGGATAGTCGCTACGAGAAC AACGCGACGGACGTCACAGTGGTGTTTGAGAGTTCCTACCAGGATTTTCACTCGGAGAAACACAGTCTGAACGCC ATGGCTTCGAATCGCACAGCATATGCGTATATGCTGCACTCGGTACCTGACAGTCTCAGCAACAGCACGTTGCGC AGTTTTGTCAACCAGATGAGCCGAAAGGCCGAGTATCTGTTCCTGACCACGTTGACGGAAGACTACTACGAGAGT TTCGATCCGGAGGGTGAGACCATCTGCGACGTGATGCCGACCTGA |
| Transcript | >Ani_SJS100_1|g8776.t1 ATGCCTCGCCCTAATCTTACGCGCCCCCGGCGGCCTTGGTGCATCGCCATTTCCATTGCCATTGCCCTAGTGATC ATTATTGTCATTGTTGTCCCCTGTGCAGTCATATTGACTCGCAAGCATGGTGGTGAAAAGACGAATGTTCTGTTC CCACTATACATCTACCCCACCAATGACAGTACATGGGATCCTTTATATGAATCGGTCACGGCGCACCCGGACCTG AACTTCACGGTCATCATCAATCCGTCGAGCGGACCCGGCTCCAGTGCGTATCCCTCGGAGGAGTATACCTCCTCA GTGGAACGACTTAGCACATATTCCAATGTACGCAAGGTTGGATATGTGCGCACGGCTTATGCCACGCGCAACATC ACCGATGTGCTGGATGATGTCGCCACTTATGCCGGGTGGGCGAATCGATCGCTGACACTAGCGATGGATGGAATT TTCTTTGACGAAGCTCCCTATGACTACTCGGCAACAAAGGTTGAGTACATGCAGACGATCAGCGAGGCCGTCAAG AGTTCTTCGGGATTGGGCCGAGATCGCATGGTGATCCACAATCCCGGTACCATTCCGGATAGTCGCTACGAGAAC AACGCGACGGACGTCACAGTGGTGTTTGAGAGTTCCTACCAGGATTTTCACTCGGAGAAACACAGTCTGAACGCC ATGGCTTCGAATCGCACAGCATATGCGTATATGCTGCACTCGGTACCTGACAGTCTCAGCAACAGCACGTTGCGC AGTTTTGTCAACCAGATGAGCCGAAAGGCCGAGTATCTGTTCCTGACCACGTTGACGGAAGACTACTACGAGAGT TTCGATCCGGAGGGTGAGACCATCTGCGACGTGATGCCGACCTGA |
| Gene | >Ani_SJS100_1|g8776.t1 ATGCCTCGCCCTAATCTTACGCGCCCCCGGCGGCCTTGGTGCATCGCCATTTCCATTGCCATTGCCCTAGTGATC ATTATTGTCATTGTTGTCCCCTGTGCAGTCATATTGACTCGCAAGCATGGTGGTGAAAAGACGAATGTTCTGTTC CCACTATACATCTACCCCACCAATGACAGTACATGGGATCCTTTATATGAATCGTATGTTGAACCTGAAACACCC ACGACCCCCGATTACATTGCGCACGGTGACTGACAGTCCCAGGGTCACGGCGCACCCGGACCTGAACTTCACGGT CATCATCAATCCGTCGAGCGGACCCGGCTCCAGTGCGTATCCCTCGGAGGAGTATACCTCCTCAGTGGAACGACT TAGCACATATTCCAATGTACGCAAGGTTGGATATGTGCGCACGGCTTATGCCACGCGCAACATCACCGATGTGCT GGATGATGTCGCCACTTATGCCGGGTGGGCGAATCGATCGCTGACACTAGCGATGGATGGAATTTTCTTTGACGA AGCTCCCTATGACTACTCGGCAACAAAGGTTGAGTACATGCAGACGATCAGCGAGGCCGTCAAGAGTTCTTCGGG ATTGGGCCGAGATCGCATGGTAAGCGAGACCGCGGTTCGGGTGCAGCAAGAGCGCAGAAAATTCTTTTGCTATGA CGATCCCAGTGGCTAACTTTTTTTTGGCGGATCTGCCCTTTAGGTGATCCACAATCCCGGTACCATTCCGGATAG TCGCTACGAGAACAACGCGACGGACGTCACAGTGGTGTTTGAGAGTTCCTACCAGGATTTTCACTCGGAGAAACA CAGTCTGAACGCCATGGCTTCGAATCGCACAGCATATGCGTATATGCTGCACTCGGTACCTGACAGTCTCAGCAA CAGCACGTTGCGCAGTTTTGTCAACCAGATGAGCCGAAAGGCCGAGTATCTGTTCCTGACCACGTTGACGGAAGA CTACTACGAGAGTTTCGATCCGGAGGGTGAGACCATCTGCGACGTGATGCCGACCTGA |