© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8775.t1 |
| Gene name | |
| Location | scaffold_072:52252..53407 |
| Strand | - |
| Gene length (bp) | 1155 |
| Transcript length (bp) | 762 |
| Coding sequence length (bp) | 762 |
| Protein length (aa) | 254 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12138 | Spherulin4 | Spherulation-specific family 4 | 3.4E-58 | 8 | 246 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8775.t1 MTLPKSGVLVPLYIYPLTPTTWDPLYNAIAAYPDLEFLVIVNPNSGPGALPCPDANYAREVARLNACPNVYPVGY IRIDYCRKPLAVACEEIDRYASWAAEYATTGLGVGGIMVDETPNHFNAAQAEYLRALHSHIKACSGLLRDRLVVH NPGTPPDPEMADAGSDLLLVCEEPFARWQTNEVQHRLGELPYPRDRCGYMVTEVPNHHIPALVRDLRRRAAYIFV TEIVGDFYERFGPSSWGILMETLSELGQ* |
| Coding | >Ani_SJS100_1|g8775.t1 ATGACGCTTCCCAAGTCCGGCGTGCTCGTGCCCTTGTATATCTATCCCTTAACTCCGACCACCTGGGATCCACTT TATAACGCAATCGCTGCCTATCCCGACCTCGAGTTCCTGGTGATCGTCAACCCCAACAGTGGACCCGGTGCCTTG CCGTGCCCCGATGCCAATTATGCGCGCGAAGTGGCCCGCCTGAATGCCTGCCCTAATGTCTATCCCGTCGGCTAT ATCCGCATCGACTATTGCCGAAAGCCATTGGCCGTCGCCTGTGAGGAGATCGATCGCTATGCCAGCTGGGCCGCC GAGTATGCCACTACCGGCTTAGGCGTGGGTGGCATCATGGTCGATGAGACTCCCAACCACTTCAATGCCGCTCAG GCCGAGTATTTGCGCGCGCTTCATAGTCACATCAAGGCTTGCTCGGGCCTTCTCCGCGACCGATTGGTGGTACAC AATCCAGGCACCCCCCCGGATCCCGAGATGGCCGATGCAGGCTCAGATCTCCTGCTGGTCTGTGAGGAGCCTTTT GCACGCTGGCAAACCAATGAGGTGCAGCATCGTCTAGGCGAGCTTCCATATCCTCGCGATCGCTGCGGCTACATG GTCACGGAAGTCCCGAACCATCATATTCCCGCCCTGGTGCGCGATCTGCGTCGTCGTGCCGCCTACATATTTGTC ACCGAAATCGTAGGCGATTTCTACGAGCGCTTCGGTCCCTCCAGCTGGGGCATATTGATGGAGACTTTGTCGGAA TTGGGACAGTAG |
| Transcript | >Ani_SJS100_1|g8775.t1 ATGACGCTTCCCAAGTCCGGCGTGCTCGTGCCCTTGTATATCTATCCCTTAACTCCGACCACCTGGGATCCACTT TATAACGCAATCGCTGCCTATCCCGACCTCGAGTTCCTGGTGATCGTCAACCCCAACAGTGGACCCGGTGCCTTG CCGTGCCCCGATGCCAATTATGCGCGCGAAGTGGCCCGCCTGAATGCCTGCCCTAATGTCTATCCCGTCGGCTAT ATCCGCATCGACTATTGCCGAAAGCCATTGGCCGTCGCCTGTGAGGAGATCGATCGCTATGCCAGCTGGGCCGCC GAGTATGCCACTACCGGCTTAGGCGTGGGTGGCATCATGGTCGATGAGACTCCCAACCACTTCAATGCCGCTCAG GCCGAGTATTTGCGCGCGCTTCATAGTCACATCAAGGCTTGCTCGGGCCTTCTCCGCGACCGATTGGTGGTACAC AATCCAGGCACCCCCCCGGATCCCGAGATGGCCGATGCAGGCTCAGATCTCCTGCTGGTCTGTGAGGAGCCTTTT GCACGCTGGCAAACCAATGAGGTGCAGCATCGTCTAGGCGAGCTTCCATATCCTCGCGATCGCTGCGGCTACATG GTCACGGAAGTCCCGAACCATCATATTCCCGCCCTGGTGCGCGATCTGCGTCGTCGTGCCGCCTACATATTTGTC ACCGAAATCGTAGGCGATTTCTACGAGCGCTTCGGTCCCTCCAGCTGGGGCATATTGATGGAGACTTTGTCGGAA TTGGGACAGTAG |
| Gene | >Ani_SJS100_1|g8775.t1 ATGACGCTTCCCAAGTCCGGCGTGCTCGTGCCCTTGTATATCTATCCCTTAACTCCGACCACCTGGGATCCACTT TATAACGCGTAAAGTTTACCTACCTTCTTTCTTGCTTGCTTGCTTTTTCTTCACTTTTTTTCTTTTTTTTTTCTT TTCTCTGGTTGATGGTCTATCCACATCATTCTTGCCTAGCAAAGTGACTGATCGGTAGGGAGTGTAACTGTAGAA TCGCTGCCTATCCCGACCTCGAGTTCCTGGTGATCGTCAACCCCAACAGTGGACCCGGTGCCTTGCCGTGCCCCG ATGCCAATTATGCGCGCGAAGTGGCCCGCCTGAATGCCTGCCCTAATGTCTATCCCGTCGGCTATATCCGCATCG ACTATTGCCGAAAGCCATTGGCCGTCGCCTGTGAGGAGATCGATCGCTATGCCAGCTGGGCCGCCGAGTATGCCA CTACCGGCTTAGGCGTGGGTGGCATCATGGTCGATGAGACTCCCAACCACTTCAATGCCGCTCAGGCCGAGTATT TGCGCGCGCTTCATAGTCACATCAAGGCTTGCTCGGGCCTTCTCCGCGACCGATTGGTAAGCATTTGTCCCTCTT ATTATGATTATTATGATGGTGGTTTTCTTTTTTTTTCTTTGGTTCAGCCACTGCCCCTCTCTCTCTCCTCATTCT CCTACCTTGGTGGAGGAGAAAAAAGGAAATGAAAACTCCGACAGCTGTTTTCTGTCTGTGTCACTGAAACCCGAC AAACGAGAAAACATGGAAACAACGTGGCTGATTTCTTTTCTAATAATAATAATAATAATAACGATGATGATGATG ATGATGCAGGTGGTACACAATCCAGGCACCCCCCCGGATCCCGAGATGGCCGATGCAGGCTCAGATCTCCTGCTG GTCTGTGAGGAGCCTTTTGCACGCTGGCAAACCAATGAGGTGCAGCATCGTCTAGGCGAGCTTCCATATCCTCGC GATCGCTGCGGCTACATGGTCACGGAAGTCCCGAACCATCATATTCCCGCCCTGGTGCGCGATCTGCGTCGTCGT GCCGCCTACATATTTGTCACCGAAATCGTAGGCGATTTCTACGAGCGCTTCGGTCCCTCCAGCTGGGGCATATTG ATGGAGACTTTGTCGGAATTGGGACAGTAG |