Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g8763.t1
Gene name
Location	scaffold_072:13753..14956
Strand	-
Gene length (bp)	1203
Transcript length (bp)	1020
Coding sequence length (bp)	1020
Protein length (aa)	340

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	30	20
2	43	65	22
3	92	114	22
4	126	148	22
5	174	196	22
6	209	228	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g8763.t1 MSNSGDDAAIIVGYLLATLAISIMGLRLYMRRYRRQSFVISDYITLFCCLCLVYIMNITLVFGTIGNVAVSYLTG ESPSRADIKRTQMSSKVTYAGAIIYFTYLWCQKAVVLCFINRLLGVLPLPYIWIRVMWAILCITYITLLLLFLTV CRPLSLYFQVYPDPGPCIRSTYHISVHAALNCVTDVMLIILPINWLLKIRRPWYKRAQLVGLFSVGIVLVVISAL RFPFHQGALDTPLQTILSPIEELLSALVANVPTLYSLRRARQPETPPQQTQSSPKRLPRAVDSIIIMQTVDVEDS RTDDQTLSTTMTDRALSTTMADHDLNDDSDGHLVRNGPE*
Coding	>Ani_SJS100_1\|g8763.t1 ATGAGCAATTCTGGGGATGATGCCGCCATTATCGTGGGGTACCTCCTTGCGACGCTGGCAATCAGCATCATGGGC CTCCGGCTCTATATGCGCCGCTATAGACGACAGTCCTTCGTCATTAGCGACTATATTACCTTGTTTTGCTGCCTG TGTCTGGTCTATATCATGAACATTACTCTTGTTTTTGGGACGATTGGTAACGTGGCCGTCTCATACTTGACGGGC GAATCACCGAGTCGCGCCGATATCAAGCGTACCCAAATGAGCAGCAAAGTCACCTACGCTGGCGCGATCATCTAC TTCACTTATCTTTGGTGTCAAAAGGCCGTCGTTCTCTGCTTCATCAACCGGCTCCTGGGGGTGCTTCCGTTGCCA TACATATGGATTCGGGTTATGTGGGCCATTCTATGCATTACCTACATAACGTTGCTCCTTCTCTTCCTCACCGTA TGCAGACCACTAAGTCTGTACTTCCAAGTCTATCCCGACCCAGGTCCTTGTATCAGATCAACATATCACATATCC GTCCACGCCGCTCTGAACTGTGTCACAGACGTAATGCTGATTATCCTTCCAATTAACTGGCTTCTCAAGATTCGG CGTCCCTGGTACAAACGTGCCCAGCTCGTCGGCCTCTTCTCCGTCGGCATTGTCCTCGTGGTGATCTCCGCTCTC CGGTTCCCCTTCCACCAAGGCGCGCTAGATACTCCATTGCAGACTATCTTGAGTCCCATCGAGGAGCTTCTCTCC GCACTGGTTGCCAACGTGCCCACATTGTACAGCCTCCGACGGGCCAGGCAGCCAGAGACGCCTCCGCAGCAGACG CAGTCATCCCCAAAGAGACTTCCACGAGCGGTCGACAGCATCATAATTATGCAGACTGTGGATGTAGAGGACTCC CGCACGGATGATCAGACACTCTCTACAACCATGACCGATCGAGCGTTATCCACTACCATGGCTGATCACGACCTG AACGACGACAGCGACGGACACCTTGTTCGCAATGGACCGGAATAA
Transcript	>Ani_SJS100_1\|g8763.t1 ATGAGCAATTCTGGGGATGATGCCGCCATTATCGTGGGGTACCTCCTTGCGACGCTGGCAATCAGCATCATGGGC CTCCGGCTCTATATGCGCCGCTATAGACGACAGTCCTTCGTCATTAGCGACTATATTACCTTGTTTTGCTGCCTG TGTCTGGTCTATATCATGAACATTACTCTTGTTTTTGGGACGATTGGTAACGTGGCCGTCTCATACTTGACGGGC GAATCACCGAGTCGCGCCGATATCAAGCGTACCCAAATGAGCAGCAAAGTCACCTACGCTGGCGCGATCATCTAC TTCACTTATCTTTGGTGTCAAAAGGCCGTCGTTCTCTGCTTCATCAACCGGCTCCTGGGGGTGCTTCCGTTGCCA TACATATGGATTCGGGTTATGTGGGCCATTCTATGCATTACCTACATAACGTTGCTCCTTCTCTTCCTCACCGTA TGCAGACCACTAAGTCTGTACTTCCAAGTCTATCCCGACCCAGGTCCTTGTATCAGATCAACATATCACATATCC GTCCACGCCGCTCTGAACTGTGTCACAGACGTAATGCTGATTATCCTTCCAATTAACTGGCTTCTCAAGATTCGG CGTCCCTGGTACAAACGTGCCCAGCTCGTCGGCCTCTTCTCCGTCGGCATTGTCCTCGTGGTGATCTCCGCTCTC CGGTTCCCCTTCCACCAAGGCGCGCTAGATACTCCATTGCAGACTATCTTGAGTCCCATCGAGGAGCTTCTCTCC GCACTGGTTGCCAACGTGCCCACATTGTACAGCCTCCGACGGGCCAGGCAGCCAGAGACGCCTCCGCAGCAGACG CAGTCATCCCCAAAGAGACTTCCACGAGCGGTCGACAGCATCATAATTATGCAGACTGTGGATGTAGAGGACTCC CGCACGGATGATCAGACACTCTCTACAACCATGACCGATCGAGCGTTATCCACTACCATGGCTGATCACGACCTG AACGACGACAGCGACGGACACCTTGTTCGCAATGGACCGGAATAA
Gene	>Ani_SJS100_1\|g8763.t1 ATGAGCAATTCTGGGGATGATGCCGCCATTATCGTGGGGTACCTCCTTGCGACGCTGGCAATCAGCATCATGGGC CTCCGGCTCTATATGCGCCGCTATAGACGACAGTCCTTCGTCATTAGCGACTATATTACCTTGTTTTGCTGCCTG TGTCTGGTCTATATCATGAACATTACTCTTGTTTTTGGGACGATTGGTAACGTGGCCGTCTCATACTTGACGGGC GAATCACCGAGTCGCGCCGATATCAAGCGTACCCAAATGAGCAGCAAAGTCACCTACGCTGGCGCGATCATCTAC TTCACTTAGTAAGTAGAATACCCAATCCAGCATACATACCGGGCCTCTACATGAAAAAAGATTACTGAGACCACG AAGTCTTTGGTGTCAAAAGGCCGTCGTTCTCTGCTTCATCAACCGGCTCCTGGGGGTGCTTCCGTTGCCATACAT ATGGATTCGGGTTATGTGGGCCATTCTATGCATTACCTACATAACGTTGCTCCTTCTCTTCCTCACCGTATGCAG ACCACTAAGTCTGTACTTCCAAGTCTATCCCGACCCAGGTGCGTACTTCACCATGCAGTGGCTAAATGTCTCCTA ACCCGTGCTTTCTTTGATCGCAGGTCCTTGTATCAGATCAACATATCACATATCCGTCCACGCCGCTCTGAACTG TGTCACAGACGTAATGCTGATTATCCTTCCAATTAACTGGCTTCTCAAGATTCGGCGTCCCTGGTACAAGTGAGT GAGAACGCTGAAATCAACAATCTTCATCCGTACTGACCGATGCGAAGACGTGCCCAGCTCGTCGGCCTCTTCTCC GTCGGCATTGTCCTCGTGGTGATCTCCGCTCTCCGGTTCCCCTTCCACCAAGGCGCGCTAGATACTCCATTGCAG ACTATCTTGAGTCCCATCGAGGAGCTTCTCTCCGCACTGGTTGCCAACGTGCCCACATTGTACAGCCTCCGACGG GCCAGGCAGCCAGAGACGCCTCCGCAGCAGACGCAGTCATCCCCAAAGAGACTTCCACGAGCGGTCGACAGCATC ATAATTATGCAGACTGTGGATGTAGAGGACTCCCGCACGGATGATCAGACACTCTCTACAACCATGACCGATCGA GCGTTATCCACTACCATGGCTGATCACGACCTGAACGACGACAGCGACGGACACCTTGTTCGCAATGGACCGGAA TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail