Protein ID | Ani_SJS100_1|g8752.t1 |
Gene name | |
Location | scaffold_071:154667..156609 |
Strand | - |
Gene length (bp) | 1942 |
Transcript length (bp) | 1635 |
Coding sequence length (bp) | 1635 |
Protein length (aa) | 545 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03619 | Solute_trans_a | Organic solute transporter Ostalpha | 2.4E-90 | 32 | 308 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 66 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 30 | 52 | 22 |
2 | 65 | 87 | 22 |
3 | 102 | 118 | 16 |
4 | 163 | 185 | 22 |
5 | 205 | 227 | 22 |
6 | 239 | 261 | 22 |
7 | 281 | 303 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8752.t1 MGWPVCNSTSEDETITEVDLWDGGITFHQLCLIMGGAFGLMAILVSFYLIGMHATHYSKKIEQRHIIRILLMVPV YSVVAWLGTYFYKNDVYYDLIGNCYEAFAISAFFSLMCAYIAPDLHSQKEYFRGVEPKPWVWPIPWLQKCTGGEK GIWRTPRSGLTWFNVIWVGVFQYCLLRVLMTIIAVVTQKFNLYCEESLNPAFSHIWVLLIECIAVSIAMYCLIQF YIQIKDDISQYQPFLKILSIKLVIFLSFWQSTLISFLTSAGAIKTTSKIQSPDLKVGLPNLLINIEMAFFAVLHL WAFSWKQYSLKNQPSEITDFYGNGKGSYEGGPFGAKGILDALNPMDLIRAIGRSFRWLFVGRKRRTMDPSYHQTA NDAFNMNATESGIDSHGTEYGGAGVMMAGGRYSPPGEEGQVLLSHAQPSPGGPPPPIDDETDPNRFYNHNRLSAA SLLEPTATHTARPYSPYEEDAYNPYLVNSHLEQDHYHEPVHANPPYPDHPSDINNPYHPTTTLQEQPPIPLPESY QPPPPNYDSDHQQQQQQRR* |
Coding | >Ani_SJS100_1|g8752.t1 ATGGGCTGGCCAGTGTGCAATTCGACCTCGGAAGATGAAACCATCACGGAGGTTGACCTCTGGGATGGCGGCATC ACCTTCCACCAACTCTGCCTGATCATGGGCGGGGCTTTTGGTCTCATGGCTATACTTGTTTCCTTCTACCTGATC GGAATGCACGCTACACATTACAGCAAAAAGATAGAGCAACGGCATATCATTCGAATCCTGCTTATGGTCCCCGTT TATTCTGTCGTCGCATGGCTCGGTACCTACTTCTACAAGAACGATGTCTACTATGATTTGATCGGCAACTGTTAT GAAGCGTTTGCGATTTCGGCTTTCTTCTCTCTTATGTGCGCATACATTGCGCCCGACTTGCATAGCCAGAAAGAA TACTTCCGTGGAGTCGAACCCAAACCGTGGGTCTGGCCGATCCCGTGGCTTCAGAAGTGTACGGGTGGAGAGAAG GGCATTTGGAGGACACCGCGCAGTGGTTTAACATGGTTCAACGTTATCTGGGTGGGCGTTTTTCAATACTGCCTC CTCCGGGTCTTGATGACTATCATTGCGGTCGTCACGCAAAAGTTTAACCTGTACTGCGAGGAATCCCTCAACCCG GCGTTTTCGCATATCTGGGTTCTCCTCATTGAATGTATTGCAGTCTCCATCGCCATGTACTGTCTGATCCAGTTC TACATTCAGATCAAAGACGACATCAGCCAGTATCAGCCATTCTTGAAGATTTTGTCAATCAAGTTGGTCATTTTC CTGTCCTTCTGGCAATCGACTTTGATCTCATTCCTTACCTCAGCCGGAGCGATCAAAACCACCTCTAAAATACAG AGTCCCGATCTTAAAGTTGGACTGCCGAACCTACTCATCAATATTGAGATGGCCTTCTTTGCCGTCCTTCACCTG TGGGCATTCTCCTGGAAACAGTATTCGCTCAAGAACCAGCCGTCCGAGATCACCGACTTCTACGGCAACGGCAAA GGCAGCTATGAGGGCGGTCCCTTCGGCGCTAAAGGCATACTCGACGCCTTGAACCCAATGGACCTCATCAGAGCA ATTGGTCGCAGTTTCCGCTGGCTCTTCGTCGGCCGGAAGAGACGCACGATGGATCCCAGCTACCACCAAACCGCA AATGACGCCTTCAACATGAACGCTACCGAGAGCGGTATCGATTCCCACGGCACCGAATACGGCGGCGCAGGCGTA ATGATGGCCGGTGGACGCTACAGTCCCCCCGGCGAAGAAGGACAGGTCCTCCTGTCGCACGCCCAGCCAAGCCCC GGTGGTCCCCCCCCTCCGATCGACGACGAAACGGACCCGAACCGCTTCTACAACCATAACCGACTCAGCGCAGCC TCCCTCCTGGAGCCAACAGCCACGCATACTGCCCGGCCGTACTCCCCTTACGAGGAGGACGCATACAACCCCTAC CTCGTGAACTCCCACCTGGAACAAGACCACTACCACGAGCCCGTCCACGCCAATCCACCTTACCCAGACCACCCT TCCGACATCAACAATCCCTACCACCCCACCACAACGCTGCAAGAACAGCCTCCCATTCCTCTCCCGGAATCCTAC CAACCCCCTCCCCCGAACTACGACAGTGACCACCAGCAACAACAACAACAACGAAGGTAA |
Transcript | >Ani_SJS100_1|g8752.t1 ATGGGCTGGCCAGTGTGCAATTCGACCTCGGAAGATGAAACCATCACGGAGGTTGACCTCTGGGATGGCGGCATC ACCTTCCACCAACTCTGCCTGATCATGGGCGGGGCTTTTGGTCTCATGGCTATACTTGTTTCCTTCTACCTGATC GGAATGCACGCTACACATTACAGCAAAAAGATAGAGCAACGGCATATCATTCGAATCCTGCTTATGGTCCCCGTT TATTCTGTCGTCGCATGGCTCGGTACCTACTTCTACAAGAACGATGTCTACTATGATTTGATCGGCAACTGTTAT GAAGCGTTTGCGATTTCGGCTTTCTTCTCTCTTATGTGCGCATACATTGCGCCCGACTTGCATAGCCAGAAAGAA TACTTCCGTGGAGTCGAACCCAAACCGTGGGTCTGGCCGATCCCGTGGCTTCAGAAGTGTACGGGTGGAGAGAAG GGCATTTGGAGGACACCGCGCAGTGGTTTAACATGGTTCAACGTTATCTGGGTGGGCGTTTTTCAATACTGCCTC CTCCGGGTCTTGATGACTATCATTGCGGTCGTCACGCAAAAGTTTAACCTGTACTGCGAGGAATCCCTCAACCCG GCGTTTTCGCATATCTGGGTTCTCCTCATTGAATGTATTGCAGTCTCCATCGCCATGTACTGTCTGATCCAGTTC TACATTCAGATCAAAGACGACATCAGCCAGTATCAGCCATTCTTGAAGATTTTGTCAATCAAGTTGGTCATTTTC CTGTCCTTCTGGCAATCGACTTTGATCTCATTCCTTACCTCAGCCGGAGCGATCAAAACCACCTCTAAAATACAG AGTCCCGATCTTAAAGTTGGACTGCCGAACCTACTCATCAATATTGAGATGGCCTTCTTTGCCGTCCTTCACCTG TGGGCATTCTCCTGGAAACAGTATTCGCTCAAGAACCAGCCGTCCGAGATCACCGACTTCTACGGCAACGGCAAA GGCAGCTATGAGGGCGGTCCCTTCGGCGCTAAAGGCATACTCGACGCCTTGAACCCAATGGACCTCATCAGAGCA ATTGGTCGCAGTTTCCGCTGGCTCTTCGTCGGCCGGAAGAGACGCACGATGGATCCCAGCTACCACCAAACCGCA AATGACGCCTTCAACATGAACGCTACCGAGAGCGGTATCGATTCCCACGGCACCGAATACGGCGGCGCAGGCGTA ATGATGGCCGGTGGACGCTACAGTCCCCCCGGCGAAGAAGGACAGGTCCTCCTGTCGCACGCCCAGCCAAGCCCC GGTGGTCCCCCCCCTCCGATCGACGACGAAACGGACCCGAACCGCTTCTACAACCATAACCGACTCAGCGCAGCC TCCCTCCTGGAGCCAACAGCCACGCATACTGCCCGGCCGTACTCCCCTTACGAGGAGGACGCATACAACCCCTAC CTCGTGAACTCCCACCTGGAACAAGACCACTACCACGAGCCCGTCCACGCCAATCCACCTTACCCAGACCACCCT TCCGACATCAACAATCCCTACCACCCCACCACAACGCTGCAAGAACAGCCTCCCATTCCTCTCCCGGAATCCTAC CAACCCCCTCCCCCGAACTACGACAGTGACCACCAGCAACAACAACAACAACGAAGGTAA |
Gene | >Ani_SJS100_1|g8752.t1 ATGGGCTGGCCAGTGTGCAATTCGACCTCGGAAGATGAAACCAGTAGGCAACCCCCCCCTCTGCGCCTTGTTGAT TGCGACTCGGGTGGGTGTCATTGAATTGGGCTGACGCGGACTTTGACAGTCACGGAGGTTGACCTCTGGGATGGC GGCATCACCTTCCACCAACTCTGCCTGATCATGGGCGGGGCTTTTGGTCTCATGGCTATACTTGTTTCCTTCTAC CTGATCGGAATGCACGCTACACATTACAGCAAAAAGATAGAGCAACGGCAGTATGATTTCTCCTCACTCACTGGC ACTTAGTCTCTTGCTGATAGCTAACTTTCTCTTCCCTTCACTAGTATCATTCGAATCCTGCTTATGGTCCCCGTT TATTCTGTCGTCGCATGGCTCGGTACCTACTTCTACAAGAACGATGTCTACTATGATTTGATCGGCAACTGTTAT GAAGCGTTTGCGATTTCGGCTTTCTTCTCTCTTATGTGCGCATACATTGCGCCCGACTTGCATAGCCAGAAAGAA TACTTCCGTGGAGTCGAACCCAAACCGTGGGTCTGGCCGATCCCGTGGCTTCAGAAGTGTACGGGTGGAGAGAAG GGCATTTGGAGGACACCGCGCAGTGGTTTAACATGGTTCAACGTGGGTGCCGACAAGCCAGAACGTGCGCGATCG AAGTTGTGCTAACATGGGCGCTAGGTTATCTGGGTGGGCGTTTTTCAATACTGCCTCCTCCGGGTCTTGATGACT ATCATTGCGGTCGTCACGCAAAAGTTTAACCTGTACTGCGAGGAATCCCTCAACCCGGCGTTTTCGCATATCTGG GTATGTGTTGTGCGACTTTGTTACGAACTCGGCTAACATGCAATAGGTTCTCCTCATTGAATGTATTGCAGTCTC CATCGCCATGTACTGTCTGATCCAGTTCTACATTCAGATCAAAGACGACATCAGCCAGTATCAGCCATTCTTGAA GATTTTGTCAATCAAGTTGGTCATTTTCCTGTCCTTCTGGCAATCGGTAAGCGCAGCATTTTGCCTGCATGCCCA TTCCGGTCGTCTAACCCATTTCTAGACTTTGATCTCATTCCTTACCTCAGCCGGAGCGATCAAAACCACCTCTAA AATACAGAGTCCCGATCTTAAAGTTGGACTGCCGAACCTACTCATCAATATTGAGATGGCCTTCTTTGCCGTCCT TCACCTGTGGGCATTCTCCTGGAAACAGTATTCGCTCAAGAACCAGCCGTCCGAGATCACCGACTTCTACGGCAA CGGCAAAGGCAGCTATGAGGGCGGTCCCTTCGGCGCTAAAGGCATACTCGACGCCTTGAACCCAATGGACCTCAT CAGAGCAATTGGTCGCAGTTTCCGCTGGCTCTTCGTCGGCCGGAAGAGACGCACGATGGATCCCAGCTACCACCA AACCGCAAATGACGCCTTCAACATGAACGCTACCGAGAGCGGTATCGATTCCCACGGCACCGAATACGGCGGCGC AGGCGTAATGATGGCCGGTGGACGCTACAGTCCCCCCGGCGAAGAAGGACAGGTCCTCCTGTCGCACGCCCAGCC AAGCCCCGGTGGTCCCCCCCCTCCGATCGACGACGAAACGGACCCGAACCGCTTCTACAACCATAACCGACTCAG CGCAGCCTCCCTCCTGGAGCCAACAGCCACGCATACTGCCCGGCCGTACTCCCCTTACGAGGAGGACGCATACAA CCCCTACCTCGTGAACTCCCACCTGGAACAAGACCACTACCACGAGCCCGTCCACGCCAATCCACCTTACCCAGA CCACCCTTCCGACATCAACAATCCCTACCACCCCACCACAACGCTGCAAGAACAGCCTCCCATTCCTCTCCCGGA ATCCTACCAACCCCCTCCCCCGAACTACGACAGTGACCACCAGCAACAACAACAACAACGAAGGTAA |