Protein ID | Ani_SJS100_1|g8738.t1 |
Gene name | |
Location | scaffold_071:122440..123802 |
Strand | - |
Gene length (bp) | 1362 |
Transcript length (bp) | 1362 |
Coding sequence length (bp) | 1362 |
Protein length (aa) | 454 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00117 | GATase | Glutamine amidotransferase class-I | 8.1E-47 | 222 | 397 |
PF00988 | CPSase_sm_chain | Carbamoyl-phosphate synthase small chain, CPSase domain | 6.2E-45 | 45 | 177 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8738.t1 MFARVFKAMPARAPAFTSVNASIQSRFMATVRQGRPATERATFTIRDGPIFHGKSFGARSNISGEAVFTTSLVGY PESLTDPSYRGQILVFTQPLIGNYGVPSAERDQHGLLKYFESPNLQAAGVVVADVAEQYSHWTAVESLGEWCARE GVPAISGVDTRAIVTYLREQGSSLARITVGEEYDADQDEAFVDPEQIHLVRQVSTKAPFHVSAADPQCHVAVIDC GVKENILRSLVSRGASITVFPFDYPIHKVAHHFDGVFISNGPGDPTHCQDTVYHLRRLMETSQVPIFGICLGHQL LALANGARTIKLKYGNRAHNIPALDTTTGRCHITSQNHGYAVDASTLPSDWKPYFVNLNDSSNEGMIHKTRPIFS TQFHPEAKGGPLDSSYLFDIYLDSVVKYKNHQLAFHPNRNTVPSPLLVDLLAKERVGVQPTIGMQNVAAAAAAAV AAA* |
Coding | >Ani_SJS100_1|g8738.t1 ATGTTCGCTCGTGTGTTCAAGGCCATGCCCGCCAGGGCCCCTGCCTTCACCTCCGTGAATGCTTCTATCCAGTCC CGATTCATGGCTACCGTCCGTCAGGGACGTCCCGCCACTGAACGTGCCACTTTCACGATCCGAGATGGCCCCATC TTCCATGGGAAGTCCTTTGGAGCCCGCTCCAACATTTCGGGTGAAGCCGTTTTCACCACTTCCCTGGTCGGATAC CCCGAGTCTCTGACCGACCCCTCCTACCGTGGTCAGATCCTGGTCTTCACCCAGCCTCTGATCGGTAACTATGGT GTTCCCTCCGCTGAGAGGGACCAGCACGGTCTGCTCAAGTACTTTGAGTCTCCCAACCTCCAGGCCGCTGGTGTC GTCGTCGCCGATGTGGCTGAGCAGTACAGCCACTGGACTGCCGTCGAGAGTCTCGGTGAATGGTGTGCCCGTGAG GGTGTGCCCGCCATCTCCGGCGTCGACACTCGTGCCATTGTCACCTACCTCCGTGAGCAGGGTTCTTCCCTCGCT CGTATCACCGTCGGTGAGGAGTACGACGCTGACCAGGATGAGGCCTTCGTCGACCCTGAGCAGATCCACCTGGTC CGTCAGGTCAGCACCAAGGCTCCTTTCCACGTCAGCGCCGCCGACCCCCAGTGCCACGTCGCTGTGATCGACTGC GGTGTCAAGGAGAACATTCTGCGTAGCTTGGTCAGCCGTGGAGCCAGTATCACTGTGTTCCCCTTCGACTACCCC ATCCACAAGGTCGCTCACCACTTTGATGGTGTCTTCATCTCCAACGGCCCCGGTGACCCGACTCACTGCCAGGAC ACCGTCTACCACCTCCGTCGCCTGATGGAGACCTCCCAGGTGCCCATCTTCGGTATCTGTCTGGGTCACCAGCTC CTGGCTCTGGCCAACGGTGCTCGTACCATCAAGCTCAAGTATGGTAACCGTGCTCACAACATCCCGGCACTGGAC ACCACTACTGGCCGCTGCCACATCACCAGCCAGAACCACGGTTATGCTGTTGATGCCTCCACCCTGCCTTCCGAC TGGAAGCCCTACTTCGTCAACCTGAACGATTCTAGCAACGAGGGTATGATCCACAAGACTCGTCCCATCTTCAGC ACCCAGTTCCACCCCGAGGCCAAGGGCGGTCCCCTGGACTCCTCTTACCTCTTCGACATCTACCTGGACAGCGTC GTCAAGTACAAGAACCACCAGCTGGCGTTCCACCCCAACCGGAACACCGTCCCCAGCCCTCTCTTGGTTGACCTC TTGGCCAAGGAGCGTGTGGGCGTCCAGCCTACCATTGGCATGCAGAACGTGGCTGCCGCCGCTGCTGCTGCCGTT GCTGCCGCTTAA |
Transcript | >Ani_SJS100_1|g8738.t1 ATGTTCGCTCGTGTGTTCAAGGCCATGCCCGCCAGGGCCCCTGCCTTCACCTCCGTGAATGCTTCTATCCAGTCC CGATTCATGGCTACCGTCCGTCAGGGACGTCCCGCCACTGAACGTGCCACTTTCACGATCCGAGATGGCCCCATC TTCCATGGGAAGTCCTTTGGAGCCCGCTCCAACATTTCGGGTGAAGCCGTTTTCACCACTTCCCTGGTCGGATAC CCCGAGTCTCTGACCGACCCCTCCTACCGTGGTCAGATCCTGGTCTTCACCCAGCCTCTGATCGGTAACTATGGT GTTCCCTCCGCTGAGAGGGACCAGCACGGTCTGCTCAAGTACTTTGAGTCTCCCAACCTCCAGGCCGCTGGTGTC GTCGTCGCCGATGTGGCTGAGCAGTACAGCCACTGGACTGCCGTCGAGAGTCTCGGTGAATGGTGTGCCCGTGAG GGTGTGCCCGCCATCTCCGGCGTCGACACTCGTGCCATTGTCACCTACCTCCGTGAGCAGGGTTCTTCCCTCGCT CGTATCACCGTCGGTGAGGAGTACGACGCTGACCAGGATGAGGCCTTCGTCGACCCTGAGCAGATCCACCTGGTC CGTCAGGTCAGCACCAAGGCTCCTTTCCACGTCAGCGCCGCCGACCCCCAGTGCCACGTCGCTGTGATCGACTGC GGTGTCAAGGAGAACATTCTGCGTAGCTTGGTCAGCCGTGGAGCCAGTATCACTGTGTTCCCCTTCGACTACCCC ATCCACAAGGTCGCTCACCACTTTGATGGTGTCTTCATCTCCAACGGCCCCGGTGACCCGACTCACTGCCAGGAC ACCGTCTACCACCTCCGTCGCCTGATGGAGACCTCCCAGGTGCCCATCTTCGGTATCTGTCTGGGTCACCAGCTC CTGGCTCTGGCCAACGGTGCTCGTACCATCAAGCTCAAGTATGGTAACCGTGCTCACAACATCCCGGCACTGGAC ACCACTACTGGCCGCTGCCACATCACCAGCCAGAACCACGGTTATGCTGTTGATGCCTCCACCCTGCCTTCCGAC TGGAAGCCCTACTTCGTCAACCTGAACGATTCTAGCAACGAGGGTATGATCCACAAGACTCGTCCCATCTTCAGC ACCCAGTTCCACCCCGAGGCCAAGGGCGGTCCCCTGGACTCCTCTTACCTCTTCGACATCTACCTGGACAGCGTC GTCAAGTACAAGAACCACCAGCTGGCGTTCCACCCCAACCGGAACACCGTCCCCAGCCCTCTCTTGGTTGACCTC TTGGCCAAGGAGCGTGTGGGCGTCCAGCCTACCATTGGCATGCAGAACGTGGCTGCCGCCGCTGCTGCTGCCGTT GCTGCCGCTTAA |
Gene | >Ani_SJS100_1|g8738.t1 ATGTTCGCTCGTGTGTTCAAGGCCATGCCCGCCAGGGCCCCTGCCTTCACCTCCGTGAATGCTTCTATCCAGTCC CGATTCATGGCTACCGTCCGTCAGGGACGTCCCGCCACTGAACGTGCCACTTTCACGATCCGAGATGGCCCCATC TTCCATGGGAAGTCCTTTGGAGCCCGCTCCAACATTTCGGGTGAAGCCGTTTTCACCACTTCCCTGGTCGGATAC CCCGAGTCTCTGACCGACCCCTCCTACCGTGGTCAGATCCTGGTCTTCACCCAGCCTCTGATCGGTAACTATGGT GTTCCCTCCGCTGAGAGGGACCAGCACGGTCTGCTCAAGTACTTTGAGTCTCCCAACCTCCAGGCCGCTGGTGTC GTCGTCGCCGATGTGGCTGAGCAGTACAGCCACTGGACTGCCGTCGAGAGTCTCGGTGAATGGTGTGCCCGTGAG GGTGTGCCCGCCATCTCCGGCGTCGACACTCGTGCCATTGTCACCTACCTCCGTGAGCAGGGTTCTTCCCTCGCT CGTATCACCGTCGGTGAGGAGTACGACGCTGACCAGGATGAGGCCTTCGTCGACCCTGAGCAGATCCACCTGGTC CGTCAGGTCAGCACCAAGGCTCCTTTCCACGTCAGCGCCGCCGACCCCCAGTGCCACGTCGCTGTGATCGACTGC GGTGTCAAGGAGAACATTCTGCGTAGCTTGGTCAGCCGTGGAGCCAGTATCACTGTGTTCCCCTTCGACTACCCC ATCCACAAGGTCGCTCACCACTTTGATGGTGTCTTCATCTCCAACGGCCCCGGTGACCCGACTCACTGCCAGGAC ACCGTCTACCACCTCCGTCGCCTGATGGAGACCTCCCAGGTGCCCATCTTCGGTATCTGTCTGGGTCACCAGCTC CTGGCTCTGGCCAACGGTGCTCGTACCATCAAGCTCAAGTATGGTAACCGTGCTCACAACATCCCGGCACTGGAC ACCACTACTGGCCGCTGCCACATCACCAGCCAGAACCACGGTTATGCTGTTGATGCCTCCACCCTGCCTTCCGAC TGGAAGCCCTACTTCGTCAACCTGAACGATTCTAGCAACGAGGGTATGATCCACAAGACTCGTCCCATCTTCAGC ACCCAGTTCCACCCCGAGGCCAAGGGCGGTCCCCTGGACTCCTCTTACCTCTTCGACATCTACCTGGACAGCGTC GTCAAGTACAAGAACCACCAGCTGGCGTTCCACCCCAACCGGAACACCGTCCCCAGCCCTCTCTTGGTTGACCTC TTGGCCAAGGAGCGTGTGGGCGTCCAGCCTACCATTGGCATGCAGAACGTGGCTGCCGCCGCTGCTGCTGCCGTT GCTGCCGCTTAA |