Protein ID | Ani_SJS100_1|g873.t1 |
Gene name | |
Location | scaffold_003:168107..169706 |
Strand | - |
Gene length (bp) | 1599 |
Transcript length (bp) | 1599 |
Coding sequence length (bp) | 1599 |
Protein length (aa) | 533 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13002 | LDB19 | Arrestin_N terminal like | 1.4E-58 | 152 | 326 |
PF00339 | Arrestin_N | Arrestin (or S-antigen), N-terminal domain | 6.8E-08 | 188 | 228 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g873.t1 MPGRLLSSFVRPSLSHHHSHHSPVSHSNSSSSSSVNEIPPNTVVSKKPSAHGAERARSPERRLSFAVEHLIHPHR DHSKDKRRSHGRSSRSKERAGQEEIAHAHAKLDVIVESPPLVCYGSPANSTGALFSGRLKISISELAGMVTLDTF DMRLMSRLTTKKPVSRDCANCASRTEELTHWNFLTEPIHLKNGDHEFPFSYLFPGHLPASCNGSLGQVEYFLSAR AHNINGEEYTYEMPVHIKRAILPGNDKSSIRIFPPTNLTGRIVLPSVVHPIGTFPVQMTLSGIVDKKEDTQTRWR LRKMMWRIEEHQKIVSTACTKHAHKIGGEGKGVLHQETRIIGHNEEKEGWKTDFDTAGGEISMQFEANINPSCNP VCDLETPGGLEARHNLVIELIVAEEFCPNRNPKLITPTGAARVLRMQFHLHVTERSGLGISWDEEMPPVYEDVPA SPPGYTMLDGDSIMEDYHGSPIHLPEYEQLERMDSLRLDSDSTHSSIRGRSRLTTDDLTAEPTVPAASNRAPSVD SQSSRHT* |
Coding | >Ani_SJS100_1|g873.t1 ATGCCTGGCCGTCTACTCTCCAGCTTCGTTCGCCCCTCCCTCTCTCACCACCACTCTCACCATTCTCCCGTCTCC CACTCCAACTCCTCGTCCTCGTCGTCTGTGAATGAGATCCCACCGAATACTGTGGTCTCCAAGAAGCCATCCGCT CATGGTGCGGAAAGAGCCCGTTCACCCGAGCGTCGTCTGTCTTTCGCCGTCGAACACCTCATCCACCCCCACCGT GATCACAGCAAGGACAAGCGACGCAGCCATGGCCGGTCCTCCCGTTCGAAGGAGCGCGCCGGACAAGAGGAAATT GCCCATGCTCACGCTAAACTAGACGTCATCGTCGAATCCCCGCCACTTGTGTGCTACGGATCCCCTGCGAACTCC ACTGGTGCTCTCTTTTCGGGGCGTCTGAAGATCAGCATCTCCGAGCTGGCCGGCATGGTTACCCTGGACACTTTC GATATGCGCCTCATGAGCAGACTGACGACGAAGAAGCCTGTTTCCAGAGACTGCGCTAACTGCGCATCGCGCACT GAGGAGCTGACCCACTGGAACTTCCTGACGGAGCCAATCCACCTCAAGAATGGCGACCATGAATTCCCCTTCAGC TACCTGTTCCCCGGTCATCTACCCGCCTCCTGCAACGGTTCGCTTGGTCAGGTCGAGTATTTCCTTTCTGCGCGT GCCCACAACATCAACGGTGAGGAATACACCTACGAGATGCCCGTGCATATCAAGCGTGCCATCCTTCCCGGAAAC GACAAGTCCTCCATCCGCATCTTCCCTCCCACCAACCTCACCGGCCGCATCGTTCTTCCCTCTGTGGTGCACCCG ATTGGGACCTTCCCTGTTCAGATGACTCTGAGCGGAATTGTGGATAAAAAGGAAGACACACAGACTCGTTGGCGC CTGCGCAAGATGATGTGGCGGATCGAAGAACACCAAAAGATCGTGTCCACCGCTTGCACCAAGCATGCACACAAG ATTGGGGGCGAGGGCAAGGGAGTTCTGCACCAAGAGACGCGCATCATCGGCCACAACGAAGAGAAAGAAGGCTGG AAGACTGACTTTGATACCGCTGGCGGCGAAATCAGCATGCAGTTCGAGGCGAACATCAACCCTTCTTGCAACCCT GTTTGCGATCTCGAAACCCCCGGTGGCTTGGAAGCGAGGCACAACCTTGTCATTGAATTGATCGTGGCTGAGGAA TTTTGCCCGAACCGGAACCCCAAGCTCATCACTCCTACTGGAGCAGCGCGCGTGTTGCGCATGCAGTTCCACCTT CATGTTACGGAGCGCAGCGGTCTTGGAATTAGCTGGGATGAAGAGATGCCTCCAGTGTACGAAGATGTGCCTGCC AGCCCGCCTGGATACACCATGCTGGACGGCGACAGCATCATGGAGGACTATCACGGATCCCCCATTCACCTGCCA GAGTATGAGCAATTGGAGCGCATGGACTCCCTTCGACTGGACAGTGACTCTACTCACTCTTCCATCCGTGGTCGG TCTCGCCTGACAACCGATGATCTGACTGCGGAGCCGACGGTACCTGCAGCCAGCAATCGAGCGCCGTCTGTCGAT TCTCAAAGCTCAAGACACACGTAA |
Transcript | >Ani_SJS100_1|g873.t1 ATGCCTGGCCGTCTACTCTCCAGCTTCGTTCGCCCCTCCCTCTCTCACCACCACTCTCACCATTCTCCCGTCTCC CACTCCAACTCCTCGTCCTCGTCGTCTGTGAATGAGATCCCACCGAATACTGTGGTCTCCAAGAAGCCATCCGCT CATGGTGCGGAAAGAGCCCGTTCACCCGAGCGTCGTCTGTCTTTCGCCGTCGAACACCTCATCCACCCCCACCGT GATCACAGCAAGGACAAGCGACGCAGCCATGGCCGGTCCTCCCGTTCGAAGGAGCGCGCCGGACAAGAGGAAATT GCCCATGCTCACGCTAAACTAGACGTCATCGTCGAATCCCCGCCACTTGTGTGCTACGGATCCCCTGCGAACTCC ACTGGTGCTCTCTTTTCGGGGCGTCTGAAGATCAGCATCTCCGAGCTGGCCGGCATGGTTACCCTGGACACTTTC GATATGCGCCTCATGAGCAGACTGACGACGAAGAAGCCTGTTTCCAGAGACTGCGCTAACTGCGCATCGCGCACT GAGGAGCTGACCCACTGGAACTTCCTGACGGAGCCAATCCACCTCAAGAATGGCGACCATGAATTCCCCTTCAGC TACCTGTTCCCCGGTCATCTACCCGCCTCCTGCAACGGTTCGCTTGGTCAGGTCGAGTATTTCCTTTCTGCGCGT GCCCACAACATCAACGGTGAGGAATACACCTACGAGATGCCCGTGCATATCAAGCGTGCCATCCTTCCCGGAAAC GACAAGTCCTCCATCCGCATCTTCCCTCCCACCAACCTCACCGGCCGCATCGTTCTTCCCTCTGTGGTGCACCCG ATTGGGACCTTCCCTGTTCAGATGACTCTGAGCGGAATTGTGGATAAAAAGGAAGACACACAGACTCGTTGGCGC CTGCGCAAGATGATGTGGCGGATCGAAGAACACCAAAAGATCGTGTCCACCGCTTGCACCAAGCATGCACACAAG ATTGGGGGCGAGGGCAAGGGAGTTCTGCACCAAGAGACGCGCATCATCGGCCACAACGAAGAGAAAGAAGGCTGG AAGACTGACTTTGATACCGCTGGCGGCGAAATCAGCATGCAGTTCGAGGCGAACATCAACCCTTCTTGCAACCCT GTTTGCGATCTCGAAACCCCCGGTGGCTTGGAAGCGAGGCACAACCTTGTCATTGAATTGATCGTGGCTGAGGAA TTTTGCCCGAACCGGAACCCCAAGCTCATCACTCCTACTGGAGCAGCGCGCGTGTTGCGCATGCAGTTCCACCTT CATGTTACGGAGCGCAGCGGTCTTGGAATTAGCTGGGATGAAGAGATGCCTCCAGTGTACGAAGATGTGCCTGCC AGCCCGCCTGGATACACCATGCTGGACGGCGACAGCATCATGGAGGACTATCACGGATCCCCCATTCACCTGCCA GAGTATGAGCAATTGGAGCGCATGGACTCCCTTCGACTGGACAGTGACTCTACTCACTCTTCCATCCGTGGTCGG TCTCGCCTGACAACCGATGATCTGACTGCGGAGCCGACGGTACCTGCAGCCAGCAATCGAGCGCCGTCTGTCGAT TCTCAAAGCTCAAGACACACGTAA |
Gene | >Ani_SJS100_1|g873.t1 ATGCCTGGCCGTCTACTCTCCAGCTTCGTTCGCCCCTCCCTCTCTCACCACCACTCTCACCATTCTCCCGTCTCC CACTCCAACTCCTCGTCCTCGTCGTCTGTGAATGAGATCCCACCGAATACTGTGGTCTCCAAGAAGCCATCCGCT CATGGTGCGGAAAGAGCCCGTTCACCCGAGCGTCGTCTGTCTTTCGCCGTCGAACACCTCATCCACCCCCACCGT GATCACAGCAAGGACAAGCGACGCAGCCATGGCCGGTCCTCCCGTTCGAAGGAGCGCGCCGGACAAGAGGAAATT GCCCATGCTCACGCTAAACTAGACGTCATCGTCGAATCCCCGCCACTTGTGTGCTACGGATCCCCTGCGAACTCC ACTGGTGCTCTCTTTTCGGGGCGTCTGAAGATCAGCATCTCCGAGCTGGCCGGCATGGTTACCCTGGACACTTTC GATATGCGCCTCATGAGCAGACTGACGACGAAGAAGCCTGTTTCCAGAGACTGCGCTAACTGCGCATCGCGCACT GAGGAGCTGACCCACTGGAACTTCCTGACGGAGCCAATCCACCTCAAGAATGGCGACCATGAATTCCCCTTCAGC TACCTGTTCCCCGGTCATCTACCCGCCTCCTGCAACGGTTCGCTTGGTCAGGTCGAGTATTTCCTTTCTGCGCGT GCCCACAACATCAACGGTGAGGAATACACCTACGAGATGCCCGTGCATATCAAGCGTGCCATCCTTCCCGGAAAC GACAAGTCCTCCATCCGCATCTTCCCTCCCACCAACCTCACCGGCCGCATCGTTCTTCCCTCTGTGGTGCACCCG ATTGGGACCTTCCCTGTTCAGATGACTCTGAGCGGAATTGTGGATAAAAAGGAAGACACACAGACTCGTTGGCGC CTGCGCAAGATGATGTGGCGGATCGAAGAACACCAAAAGATCGTGTCCACCGCTTGCACCAAGCATGCACACAAG ATTGGGGGCGAGGGCAAGGGAGTTCTGCACCAAGAGACGCGCATCATCGGCCACAACGAAGAGAAAGAAGGCTGG AAGACTGACTTTGATACCGCTGGCGGCGAAATCAGCATGCAGTTCGAGGCGAACATCAACCCTTCTTGCAACCCT GTTTGCGATCTCGAAACCCCCGGTGGCTTGGAAGCGAGGCACAACCTTGTCATTGAATTGATCGTGGCTGAGGAA TTTTGCCCGAACCGGAACCCCAAGCTCATCACTCCTACTGGAGCAGCGCGCGTGTTGCGCATGCAGTTCCACCTT CATGTTACGGAGCGCAGCGGTCTTGGAATTAGCTGGGATGAAGAGATGCCTCCAGTGTACGAAGATGTGCCTGCC AGCCCGCCTGGATACACCATGCTGGACGGCGACAGCATCATGGAGGACTATCACGGATCCCCCATTCACCTGCCA GAGTATGAGCAATTGGAGCGCATGGACTCCCTTCGACTGGACAGTGACTCTACTCACTCTTCCATCCGTGGTCGG TCTCGCCTGACAACCGATGATCTGACTGCGGAGCCGACGGTACCTGCAGCCAGCAATCGAGCGCCGTCTGTCGAT TCTCAAAGCTCAAGACACACGTAA |