© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8727.t1 |
| Gene name | |
| Location | scaffold_071:92899..94335 |
| Strand | + |
| Gene length (bp) | 1436 |
| Transcript length (bp) | 1272 |
| Coding sequence length (bp) | 1272 |
| Protein length (aa) | 424 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 26 | 48 | 22 |
| 2 | 61 | 80 | 19 |
| 3 | 105 | 127 | 22 |
| 4 | 144 | 166 | 22 |
| 5 | 191 | 213 | 22 |
| 6 | 226 | 248 | 22 |
| 7 | 263 | 285 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8727.t1 MLLPPAEVLATWPTPNYVDPVTRGPAVNIVNIVLISIAFVVTVLRLYTRFKITCTPGLDDFFIVIAFAIAVGMCA VTSLATERWGANRHVWDVPLSWLPVVTKYNLGFQITFSLSCSITKLSVLWFCKRLIGTGSKGLYRVYNIVVIVSF IFVALCCIVFLLVSIFQCSPIHAYWDLEPMYPYHCVNYGAAVFSASVVNIFTDFLCTLVPMPLIWNLKLPARQRM AVISIFGLGIFVNVAGTVRTVYVWKSMMASYDTTWMAWPILLAGSIEINLALICASAPALRPLIGFVLPHLLPSA RGYGSSFGNRELKGWSSTGPSKQSRASKMIEDRQYGYQGDTTVDRMEVLRTVEMETWTENRRPSHSNNSQVTSNH TRVATPTHHVDLKNTGVVYTSPGSDVSSTSLTRDSKEQHTFYEHQNPV* |
| Coding | >Ani_SJS100_1|g8727.t1 ATGCTTCTCCCTCCGGCCGAGGTTCTGGCCACATGGCCCACGCCCAACTACGTCGACCCGGTGACTCGCGGGCCT GCCGTGAATATCGTGAACATCGTCCTTATTTCCATCGCATTCGTCGTGACTGTCCTCCGTCTTTACACACGTTTC AAGATAACTTGCACACCTGGTCTTGATGACTTCTTCATTGTCATCGCTTTTGCTATCGCAGTCGGCATGTGTGCG GTTACTTCTCTGGCAACTGAGCGCTGGGGTGCGAACCGGCATGTGTGGGACGTACCCTTGTCCTGGCTTCCCGTC GTCACAAAATACAACCTCGGCTTTCAGATTACATTTTCTCTATCCTGTTCTATCACCAAGCTTTCGGTTCTGTGG TTCTGCAAGCGCCTCATCGGCACGGGTAGTAAGGGACTGTACAGGGTCTACAACATTGTCGTGATTGTCTCCTTC ATCTTTGTGGCCTTGTGCTGCATTGTCTTTCTGTTGGTCAGCATCTTTCAGTGCTCGCCTATCCATGCATACTGG GACTTGGAGCCAATGTATCCTTATCATTGCGTCAATTATGGCGCAGCCGTATTCTCTGCGAGTGTTGTCAACATC TTCACCGATTTCCTCTGCACTCTGGTCCCGATGCCCTTGATCTGGAACCTGAAGTTACCTGCCCGGCAGCGGATG GCCGTGATTTCGATCTTCGGTCTGGGTATCTTCGTCAACGTGGCGGGTACAGTGCGCACAGTATATGTCTGGAAG AGTATGATGGCCTCCTATGACACTACCTGGATGGCATGGCCTATCCTGCTCGCCGGATCGATCGAAATCAACTTG GCACTGATCTGTGCCTCTGCGCCTGCACTGAGACCTCTTATCGGATTTGTCTTACCCCACCTTCTCCCGTCCGCT CGTGGCTATGGATCCTCATTCGGCAACCGGGAGTTGAAGGGGTGGTCTTCCACTGGGCCGTCCAAGCAGTCTCGT GCTTCCAAAATGATCGAAGATCGCCAGTATGGCTACCAGGGCGACACCACGGTGGATCGTATGGAGGTCTTGCGC ACTGTTGAGATGGAGACATGGACCGAGAATCGGAGACCCAGCCATAGCAACAACTCCCAGGTCACGTCGAATCAC ACGCGCGTCGCAACCCCGACGCACCACGTCGACTTGAAGAACACTGGTGTGGTCTATACGTCGCCTGGTAGCGAC GTCTCCTCCACGTCACTCACCCGTGACTCCAAGGAGCAACACACATTTTACGAACACCAGAACCCCGTCTAG |
| Transcript | >Ani_SJS100_1|g8727.t1 ATGCTTCTCCCTCCGGCCGAGGTTCTGGCCACATGGCCCACGCCCAACTACGTCGACCCGGTGACTCGCGGGCCT GCCGTGAATATCGTGAACATCGTCCTTATTTCCATCGCATTCGTCGTGACTGTCCTCCGTCTTTACACACGTTTC AAGATAACTTGCACACCTGGTCTTGATGACTTCTTCATTGTCATCGCTTTTGCTATCGCAGTCGGCATGTGTGCG GTTACTTCTCTGGCAACTGAGCGCTGGGGTGCGAACCGGCATGTGTGGGACGTACCCTTGTCCTGGCTTCCCGTC GTCACAAAATACAACCTCGGCTTTCAGATTACATTTTCTCTATCCTGTTCTATCACCAAGCTTTCGGTTCTGTGG TTCTGCAAGCGCCTCATCGGCACGGGTAGTAAGGGACTGTACAGGGTCTACAACATTGTCGTGATTGTCTCCTTC ATCTTTGTGGCCTTGTGCTGCATTGTCTTTCTGTTGGTCAGCATCTTTCAGTGCTCGCCTATCCATGCATACTGG GACTTGGAGCCAATGTATCCTTATCATTGCGTCAATTATGGCGCAGCCGTATTCTCTGCGAGTGTTGTCAACATC TTCACCGATTTCCTCTGCACTCTGGTCCCGATGCCCTTGATCTGGAACCTGAAGTTACCTGCCCGGCAGCGGATG GCCGTGATTTCGATCTTCGGTCTGGGTATCTTCGTCAACGTGGCGGGTACAGTGCGCACAGTATATGTCTGGAAG AGTATGATGGCCTCCTATGACACTACCTGGATGGCATGGCCTATCCTGCTCGCCGGATCGATCGAAATCAACTTG GCACTGATCTGTGCCTCTGCGCCTGCACTGAGACCTCTTATCGGATTTGTCTTACCCCACCTTCTCCCGTCCGCT CGTGGCTATGGATCCTCATTCGGCAACCGGGAGTTGAAGGGGTGGTCTTCCACTGGGCCGTCCAAGCAGTCTCGT GCTTCCAAAATGATCGAAGATCGCCAGTATGGCTACCAGGGCGACACCACGGTGGATCGTATGGAGGTCTTGCGC ACTGTTGAGATGGAGACATGGACCGAGAATCGGAGACCCAGCCATAGCAACAACTCCCAGGTCACGTCGAATCAC ACGCGCGTCGCAACCCCGACGCACCACGTCGACTTGAAGAACACTGGTGTGGTCTATACGTCGCCTGGTAGCGAC GTCTCCTCCACGTCACTCACCCGTGACTCCAAGGAGCAACACACATTTTACGAACACCAGAACCCCGTCTAG |
| Gene | >Ani_SJS100_1|g8727.t1 ATGCTTCTCCCTCCGGCCGAGGTTCTGGCCACATGGCCCACGCCCAACTACGTCGACCCGGTGACTCGCGGGCCT GCCGTGAATATCGTGAACATCGTCCTTATTTCCATCGCATTCGTCGTGACTGTCCTCCGTCTTTACACACGTTTC AAGATAACTTGCACACCTGGTCTTGATGACTTCTTCATTGTCATCGCTTTTGTACGTCTAAAGATGCATCTATGC TGGGGTTACTGGCCTGTCTAACACTTCCTAGGCTATCGCAGTCGGCATGTGTGCGGTTACTTCTCTGGCAACTGA GCGCTGGGGTGCGAACCGGCATGTGTGGGACGTACCCTTGTCCTGGCTTCCCGTCGTCACAAAATACAACCTCGG CTTTCAGATTACATTTTCTCTATCCTGTTCTATCACCAAGCTTTCGGTTCTGTGGTTCTGCAAGCGCCTCATCGG CACGGGTAGTAAGGGACTGTACAGGGTCTACAACATTGTCGTGATTGTCTCCTTCATCTTTGTGGCCTTGTGCTG CATTGTCTTTCTGTTGGTCAGCATCTTTCAGTGCTCGTGAGTGCCTCCGTCCCTCGACCCACTGCGGACATTGAC TAATTGTGCTGCTATCAGGCCTATCCATGCATACTGGGACTTGGAGCCAATGTATCCTTATCATTGCGTCAATTA TGGCGCAGCCGTATTCTCTGCGAGTGTTGTCAACATCTTCACCGATTTCCTCTGCACTCTGGTCCCGATGCCCTT GATCTGGAACCTGAAGTTACCTGCCCGGCAGCGGATGGCCGTGATTTCGATCTTCGGTCTGGGTATCTTCGTCAA CGTGGCGGGTACAGTGCGCACAGTATATGTCTGGAAGAGTATGATGGCCTCCTATGACACTACCTGGATGGCATG GCCTATCCTGCTCGCCGGATCGATCGAAATCAACTTGGCACTGGTATGATGACCCTCACAACATGTGCTCGTTTC ACGGCTAACTCTGTATTTAGATCTGTGCCTCTGCGCCTGCACTGAGACCTCTTATCGGATTTGTCTTACCCCACC TTCTCCCGTCCGCTCGTGGCTATGGATCCTCATTCGGCAACCGGGAGTTGAAGGGGTGGTCTTCCACTGGGCCGT CCAAGCAGTCTCGTGCTTCCAAAATGATCGAAGATCGCCAGTATGGCTACCAGGGCGACACCACGGTGGATCGTA TGGAGGTCTTGCGCACTGTTGAGATGGAGACATGGACCGAGAATCGGAGACCCAGCCATAGCAACAACTCCCAGG TCACGTCGAATCACACGCGCGTCGCAACCCCGACGCACCACGTCGACTTGAAGAACACTGGTGTGGTCTATACGT CGCCTGGTAGCGACGTCTCCTCCACGTCACTCACCCGTGACTCCAAGGAGCAACACACATTTTACGAACACCAGA ACCCCGTCTAG |