Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g872.t1
Gene name
Locationscaffold_003:164964..166434
Strand+
Gene length (bp)1470
Transcript length (bp)1470
Coding sequence length (bp)1470
Protein length (aa) 490

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 77 99 22
2 119 141 22
3 154 176 22
4 186 208 22
5 227 244 17
6 259 281 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g872.t1
MSSSPVQTVVSVPQPAKCASGPPSPGEATLTDQTIVNELSEKVEASHSHAGNNPWDLEAQEHKVKKLSRIRYALL
NIYRRLFTLVFLANVAVFAAIMVTDRTLLALVNATAGNLMACGLARQPLVVNSIFISVCSIPRSAPKWLRLLAAK
AYHYGGVHSGCGVAAFVWYVGFVGVMSREYWTGASVLSLAPVILAYVILVLLLAIIIVAHPKFRFKRHDYFELTH
RFSGWLVVALFVILLMIFADQAKAAYHESLGRFLITLPAFWFLMVTVVAIIHPWLLLRKVPVRAEYLSSHAVRLH
FTHTTTNFGKGIQLSRHPLQDWHGFATFPDPEGKSFSALVSKAGDWTTACIQDPPTHLWKRGVLINGFAYAMRVF
KRVVVVTTGSGIGPCLSFLGDANRPELRVLWQTRAPLKTYGQDILNLVSEMDANPVVIDTNQAGRIDMVPIIRQM
VRDFDAEAVCVISNPFVTKKVVYELESHGIHAYGPIFDS*
Coding >Ani_SJS100_1|g872.t1
ATGTCATCGTCTCCAGTACAGACCGTTGTGTCGGTACCACAGCCTGCCAAATGTGCATCAGGCCCACCGAGCCCA
GGCGAGGCAACATTGACGGACCAGACTATAGTCAATGAGCTCTCAGAGAAGGTGGAGGCTTCGCACAGTCATGCA
GGCAACAACCCCTGGGACCTTGAAGCCCAAGAGCACAAGGTGAAGAAGCTATCTCGGATCCGGTATGCCTTGCTC
AACATCTACCGTCGTCTCTTCACCTTGGTCTTCCTCGCCAATGTTGCCGTGTTCGCGGCCATCATGGTCACAGAC
CGGACCCTATTAGCCCTGGTCAACGCTACCGCCGGCAACCTGATGGCATGTGGATTGGCACGACAGCCGTTGGTA
GTCAACTCAATCTTCATTTCGGTTTGCTCGATACCGAGATCAGCTCCGAAATGGTTGCGTCTGTTGGCCGCAAAG
GCATATCATTATGGCGGCGTGCACAGCGGATGTGGCGTAGCCGCTTTCGTCTGGTATGTGGGATTTGTGGGCGTG
ATGTCTCGGGAATACTGGACCGGAGCGTCGGTCCTATCCCTTGCGCCCGTTATCCTGGCATACGTTATTCTGGTC
CTGCTGCTGGCAATCATCATTGTGGCCCACCCGAAGTTCCGCTTCAAGCGGCACGACTACTTCGAGCTGACGCAC
CGGTTCTCCGGATGGCTCGTCGTGGCACTCTTTGTGATACTGCTCATGATCTTCGCCGACCAAGCCAAGGCGGCG
TACCACGAATCCCTGGGTCGGTTCCTCATCACCCTCCCTGCGTTCTGGTTCTTGATGGTCACGGTCGTGGCAATC
ATCCATCCCTGGCTTCTTCTCCGCAAAGTCCCCGTCCGGGCCGAATACCTCTCCTCGCATGCGGTGCGTCTCCAC
TTCACGCATACCACCACGAACTTCGGCAAGGGCATCCAATTATCTCGACACCCACTGCAAGACTGGCATGGCTTT
GCCACGTTCCCAGACCCAGAAGGTAAAAGCTTCTCTGCATTGGTCTCCAAAGCAGGGGACTGGACGACAGCCTGC
ATCCAAGACCCACCCACCCATCTCTGGAAGCGAGGGGTTCTGATAAACGGCTTTGCATACGCAATGCGGGTCTTC
AAGCGCGTGGTGGTTGTAACGACAGGATCCGGAATCGGCCCGTGTCTCTCCTTCCTGGGGGATGCGAACCGGCCA
GAACTCCGAGTGCTCTGGCAGACGCGGGCACCACTCAAGACCTACGGTCAGGACATCCTGAACCTGGTCTCCGAG
ATGGACGCGAACCCGGTCGTCATTGACACCAACCAGGCCGGGCGAATCGACATGGTCCCAATAATCCGACAGATG
GTTAGGGACTTCGACGCCGAGGCTGTCTGCGTGATTAGCAATCCGTTCGTCACGAAAAAGGTAGTATACGAACTG
GAGTCTCACGGCATCCATGCATATGGACCGATTTTCGATTCATGA
Transcript >Ani_SJS100_1|g872.t1
ATGTCATCGTCTCCAGTACAGACCGTTGTGTCGGTACCACAGCCTGCCAAATGTGCATCAGGCCCACCGAGCCCA
GGCGAGGCAACATTGACGGACCAGACTATAGTCAATGAGCTCTCAGAGAAGGTGGAGGCTTCGCACAGTCATGCA
GGCAACAACCCCTGGGACCTTGAAGCCCAAGAGCACAAGGTGAAGAAGCTATCTCGGATCCGGTATGCCTTGCTC
AACATCTACCGTCGTCTCTTCACCTTGGTCTTCCTCGCCAATGTTGCCGTGTTCGCGGCCATCATGGTCACAGAC
CGGACCCTATTAGCCCTGGTCAACGCTACCGCCGGCAACCTGATGGCATGTGGATTGGCACGACAGCCGTTGGTA
GTCAACTCAATCTTCATTTCGGTTTGCTCGATACCGAGATCAGCTCCGAAATGGTTGCGTCTGTTGGCCGCAAAG
GCATATCATTATGGCGGCGTGCACAGCGGATGTGGCGTAGCCGCTTTCGTCTGGTATGTGGGATTTGTGGGCGTG
ATGTCTCGGGAATACTGGACCGGAGCGTCGGTCCTATCCCTTGCGCCCGTTATCCTGGCATACGTTATTCTGGTC
CTGCTGCTGGCAATCATCATTGTGGCCCACCCGAAGTTCCGCTTCAAGCGGCACGACTACTTCGAGCTGACGCAC
CGGTTCTCCGGATGGCTCGTCGTGGCACTCTTTGTGATACTGCTCATGATCTTCGCCGACCAAGCCAAGGCGGCG
TACCACGAATCCCTGGGTCGGTTCCTCATCACCCTCCCTGCGTTCTGGTTCTTGATGGTCACGGTCGTGGCAATC
ATCCATCCCTGGCTTCTTCTCCGCAAAGTCCCCGTCCGGGCCGAATACCTCTCCTCGCATGCGGTGCGTCTCCAC
TTCACGCATACCACCACGAACTTCGGCAAGGGCATCCAATTATCTCGACACCCACTGCAAGACTGGCATGGCTTT
GCCACGTTCCCAGACCCAGAAGGTAAAAGCTTCTCTGCATTGGTCTCCAAAGCAGGGGACTGGACGACAGCCTGC
ATCCAAGACCCACCCACCCATCTCTGGAAGCGAGGGGTTCTGATAAACGGCTTTGCATACGCAATGCGGGTCTTC
AAGCGCGTGGTGGTTGTAACGACAGGATCCGGAATCGGCCCGTGTCTCTCCTTCCTGGGGGATGCGAACCGGCCA
GAACTCCGAGTGCTCTGGCAGACGCGGGCACCACTCAAGACCTACGGTCAGGACATCCTGAACCTGGTCTCCGAG
ATGGACGCGAACCCGGTCGTCATTGACACCAACCAGGCCGGGCGAATCGACATGGTCCCAATAATCCGACAGATG
GTTAGGGACTTCGACGCCGAGGCTGTCTGCGTGATTAGCAATCCGTTCGTCACGAAAAAGGTAGTATACGAACTG
GAGTCTCACGGCATCCATGCATATGGACCGATTTTCGATTCATGA
Gene >Ani_SJS100_1|g872.t1
ATGTCATCGTCTCCAGTACAGACCGTTGTGTCGGTACCACAGCCTGCCAAATGTGCATCAGGCCCACCGAGCCCA
GGCGAGGCAACATTGACGGACCAGACTATAGTCAATGAGCTCTCAGAGAAGGTGGAGGCTTCGCACAGTCATGCA
GGCAACAACCCCTGGGACCTTGAAGCCCAAGAGCACAAGGTGAAGAAGCTATCTCGGATCCGGTATGCCTTGCTC
AACATCTACCGTCGTCTCTTCACCTTGGTCTTCCTCGCCAATGTTGCCGTGTTCGCGGCCATCATGGTCACAGAC
CGGACCCTATTAGCCCTGGTCAACGCTACCGCCGGCAACCTGATGGCATGTGGATTGGCACGACAGCCGTTGGTA
GTCAACTCAATCTTCATTTCGGTTTGCTCGATACCGAGATCAGCTCCGAAATGGTTGCGTCTGTTGGCCGCAAAG
GCATATCATTATGGCGGCGTGCACAGCGGATGTGGCGTAGCCGCTTTCGTCTGGTATGTGGGATTTGTGGGCGTG
ATGTCTCGGGAATACTGGACCGGAGCGTCGGTCCTATCCCTTGCGCCCGTTATCCTGGCATACGTTATTCTGGTC
CTGCTGCTGGCAATCATCATTGTGGCCCACCCGAAGTTCCGCTTCAAGCGGCACGACTACTTCGAGCTGACGCAC
CGGTTCTCCGGATGGCTCGTCGTGGCACTCTTTGTGATACTGCTCATGATCTTCGCCGACCAAGCCAAGGCGGCG
TACCACGAATCCCTGGGTCGGTTCCTCATCACCCTCCCTGCGTTCTGGTTCTTGATGGTCACGGTCGTGGCAATC
ATCCATCCCTGGCTTCTTCTCCGCAAAGTCCCCGTCCGGGCCGAATACCTCTCCTCGCATGCGGTGCGTCTCCAC
TTCACGCATACCACCACGAACTTCGGCAAGGGCATCCAATTATCTCGACACCCACTGCAAGACTGGCATGGCTTT
GCCACGTTCCCAGACCCAGAAGGTAAAAGCTTCTCTGCATTGGTCTCCAAAGCAGGGGACTGGACGACAGCCTGC
ATCCAAGACCCACCCACCCATCTCTGGAAGCGAGGGGTTCTGATAAACGGCTTTGCATACGCAATGCGGGTCTTC
AAGCGCGTGGTGGTTGTAACGACAGGATCCGGAATCGGCCCGTGTCTCTCCTTCCTGGGGGATGCGAACCGGCCA
GAACTCCGAGTGCTCTGGCAGACGCGGGCACCACTCAAGACCTACGGTCAGGACATCCTGAACCTGGTCTCCGAG
ATGGACGCGAACCCGGTCGTCATTGACACCAACCAGGCCGGGCGAATCGACATGGTCCCAATAATCCGACAGATG
GTTAGGGACTTCGACGCCGAGGCTGTCTGCGTGATTAGCAATCCGTTCGTCACGAAAAAGGTAGTATACGAACTG
GAGTCTCACGGCATCCATGCATATGGACCGATTTTCGATTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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