Protein ID | Ani_SJS100_1|g8669.t1 |
Gene name | |
Location | scaffold_070:105175..108125 |
Strand | - |
Gene length (bp) | 2950 |
Transcript length (bp) | 2889 |
Coding sequence length (bp) | 2889 |
Protein length (aa) | 963 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 1.2E-09 | 909 | 954 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 127 | 149 | 22 |
2 | 170 | 187 | 17 |
3 | 386 | 408 | 22 |
4 | 428 | 450 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g8669.t1 MSILPSAASAATASLTAAQSLNTTSSIAAHSSLSSSSRELLSLPFRGLYQAEAFTFSTVPKQIAKLVGLQDMATR FWGAAPGTGLEPEAVLATQTAAEAVRDGVVDAAAQADSSLHFSDILQAVMKFSGFFSYLTSRWSLTCFTVALILN RITIYASTRRHLNLDWTRRLALRIVPIVLFITQIYALLRSIRCQTSPEYSTIRYGTPGKRLLFDHSGGGGFLHSL SSTLLPWETDEQSCSAVHMGRPVNASDISYGSFRLLWPVFIRLCLSHFVETVSCALQGRAVVTEAGMSIFEHSLA FAEAESVISQTLGLGIFGLSKQSSSKDIAGEGGQSTLHILTRAQALERMNVTPELLLIAMISCCNSLTSNVLDVI GRQSRYRLVNTAFWGLCFMSAMAWGLFGSSAVGSDNVVLKFPTVCIVGFVPHLLILLGIIACVFIYAFALIITAF SLPTQTSGPLSLRERFSLAHENMQGASQIQNIRLNWHEDFYSTLLRIGYTALTAASEAVFLNEGRRVSARRMTWL EQDRLAEIESHRKQSSWNLRSDPSGDMCSENGELDFDIPESTVEWESGYSREKKIEKPKPGSRPVRPQNDAGGVG TFRGVVRCYHGFAFFRGIFYLVLKWISYGLDKLLSRMGITARPQWLKSAVGSPKDSQKKRKGNRMDTLDFWILTD DGVLELPDDHEFDVEREMRKRERNQAAGWEESDERRLDEKLYGWWKVGGSWGNQDQTSDYTPSVGDWEDTTSVIS MSTTADSEWEGYESDGRRTPTQEDPFPGRFSRESTPAHEPLVDIGALARLLDPRDQESRHEARILSAHLAAGREG RIMTRRQFQKHVERDRAQILLSSRLARPSTYESTNGKRKPTSEEEAELLENLILSRRAEMSSARSTDEQTWESGA SGLGPSGPPCVICQTNPRSIITWPCRCLCICEDCRVSLAMNNFGNCVTCRQDVAGYVRLWVP* |
Coding | >Ani_SJS100_1|g8669.t1 ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCCTGAACACCACTTCA TCGATCGCCGCTCATTCCTCATTGTCCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAGATATGGCGACACGA TTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCCTCCAGGCAGTCATG AAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGCTCTCATATTGAAC AGGATTACCATATATGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTT CCCATTGTCCTCTTTATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCT ACGATACGCTATGGTACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTA AGCTCCACCCTTTTGCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCC TCGGACATATCATATGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAG ACCGTGTCTTGCGCTTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCA TTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCT AAAGATATCGCTGGGGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAAT GTCACCCCCGAGTTATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACGTTCTAGATGTCATT GGCAGACAAAGTCGTTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGC TTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGTCGTTCTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTT CCGCACCTTCTAATCCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTT TCGCTACCTACGCAGACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATGAGAATATGCAGGGC GCCAGCCAGATTCAGAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACG GCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTA GAACAGGACAGGCTGGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGG GATATGTGCTCTGAGAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCG CGCGAAAAGAAGATCGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGT ACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGG ATTTCTTACGGTTTGGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTA GGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTTGGATTTTGACAGAT GATGGAGTTTTAGAGCTGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAG GCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCC TGGGGCAATCAGGACCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCG ATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCC TTTCCAGGTCGTTTCTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTG CTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGT CGGATAATGACCCGTCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTG GCACGGCCTTCCACATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAA AACCTCATCCTTTCGCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCC TCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCATCACCTGGCCATGT CGGTGTCTCTGTATTTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGC CAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCCATAA |
Transcript | >Ani_SJS100_1|g8669.t1 ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCCTGAACACCACTTCA TCGATCGCCGCTCATTCCTCATTGTCCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAGATATGGCGACACGA TTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCCTCCAGGCAGTCATG AAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGCTCTCATATTGAAC AGGATTACCATATATGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTT CCCATTGTCCTCTTTATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCT ACGATACGCTATGGTACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTA AGCTCCACCCTTTTGCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCC TCGGACATATCATATGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAG ACCGTGTCTTGCGCTTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCA TTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCT AAAGATATCGCTGGGGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAAT GTCACCCCCGAGTTATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACGTTCTAGATGTCATT GGCAGACAAAGTCGTTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGC TTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGTCGTTCTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTT CCGCACCTTCTAATCCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTT TCGCTACCTACGCAGACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATGAGAATATGCAGGGC GCCAGCCAGATTCAGAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACG GCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTA GAACAGGACAGGCTGGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGG GATATGTGCTCTGAGAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCG CGCGAAAAGAAGATCGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGT ACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGG ATTTCTTACGGTTTGGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTA GGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTTGGATTTTGACAGAT GATGGAGTTTTAGAGCTGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAG GCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCC TGGGGCAATCAGGACCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCG ATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCC TTTCCAGGTCGTTTCTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTG CTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGT CGGATAATGACCCGTCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTG GCACGGCCTTCCACATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAA AACCTCATCCTTTCGCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCC TCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCATCACCTGGCCATGT CGGTGTCTCTGTATTTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGC CAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCCATAA |
Gene | >Ani_SJS100_1|g8669.t1 ATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCCTGAACACCACTTCA TCGATCGCCGCTCATTCCTCATTGTCCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAG GCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAGATATGGCGACACGA TTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTC AGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCCTCCAGGCAGTCATG AAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGTAAATACCCACTGG CCCCGGCTAGTCGTTGTTGTGAAAATGGTCAGGCTAACCTATCAAGGCTCTCATATTGAACAGGATTACCATATA TGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTTCCCATTGTCCTCTT TATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATACTCTACGATACGCTATGG TACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTAAGCTCCACCCTTTT GCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCCTCGGACATATCATA TGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAGACCGTGTCTTGCGC TTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCATTTGCAGAGGCGGA ATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCTAAAGATATCGCTGG GGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAATGTCACCCCCGAGTT ATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACGTTCTAGATGTCATTGGCAGACAAAGTCG TTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGCTTGTTCGGTAGTTC GGCAGTTGGAAGCGACAATGTCGTTCTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTTCCGCACCTTCTAAT CCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGCATTTTCGCTACCTACGCA GACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATGAGAATATGCAGGGCGCCAGCCAGATTCA GAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTACACGGCTTTAACGGCTGC TAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTAGAACAGGACAGGCT GGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGGGATATGTGCTCTGA GAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCGCGCGAAAAGAAGAT CGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGTACCTTCAGGGGCGT GGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGGATTTCTTACGGTTT GGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTAGGGTCACCAAAGGA CTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTTGGATTTTGACAGATGATGGAGTTTTAGA GCTGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAGGCCGCTGGCTGGGA GGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCCTGGGGCAATCAGGA CCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCATATCGATGTCGACAACGGC CGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCCTTTCCAGGTCGTTT CTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACGACTGCTGGATCCTCGCGA TCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGTCGGATAATGACCCG TCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTGGCACGGCCTTCCAC ATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAAAACCTCATCCTTTC GCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCCTCGGGTCTTGGTCC TAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCATCACCTGGCCATGTCGGTGTCTCTGTAT TTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATGCCGCCAGGACGTTGCAGG CTATGTCCGGCTATGGGTCCCATAA |