© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8654.t1 |
| Gene name | |
| Location | scaffold_070:67320..69602 |
| Strand | + |
| Gene length (bp) | 2282 |
| Transcript length (bp) | 2160 |
| Coding sequence length (bp) | 2160 |
| Protein length (aa) | 720 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05011 | DBR1 | Lariat debranching enzyme, C-terminal domain | 1.2E-45 | 529 | 670 |
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | 4.7E-05 | 12 | 240 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006397 | mRNA processing | Yes |
| GO:0016787 | hydrolase activity | Yes |
| GO:0016788 | hydrolase activity, acting on ester bonds | Yes |
| GO:0009987 | cellular process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0016071 | mRNA metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0006396 | RNA processing | No |
| GO:0008152 | metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8654.t1 MEMPTSESSSIRVAFEGCGHGCLHDIYASVDKAAALKGWDGVDLVIIGGDFQAVRNANDLACMSVPMKYRELGDF HEYYSGQRVAPYLTIFVGGNHEASNHMFELYYGGWVAPNIYYLGAANVIRCGPLRIAGMSGIWKGYDYRRPHFER LPYNSDDVQSIYHIRELDVRKLLQIRTQVDLGLSHDWPKQVERSGDFETLFRKKLGFREDSQNGRLGSMAAKHVL DRLRPAYWFSAHLHVKFAALVQHAEYVVPEHPAAKRQAATAPTDASQSSSAPQAFALDGAVFTSLVLGEENPLNE HMASASTAKSGKPNESHAVNTGDSQLQSESGQPARQPSKTDASAGEAAGDMATKLSAWNNFHAVAARNEAAENDL YLSGKAQNHGPNPYEIKHNLTWKRVETDMDGVNRKIASVEREVSPDRQSNKKQKVQHESEVVKNSDEIDLDLDSD SDDASSKAQPETAVSGNTGSPTHTPTTNQMERDNGNAQAEPDKAADVAQDVRNQLPASFARPQPDPYPVNGPLPE AISNKMTSFLALDKCLPNREFLQLLEINPISDLDGAKVERPYRLQYDKEWLAITRAFANDLHLGDPNARPSADKG DVVYRPQILEEEKWVEQNVVKPGKLVVPENFTQTAPVYDPAVPLTTEEMPMEYTNPQTTEFCELIGIENKFDMSD AERQARMARGPRPNSNRGGMNRPPRRGGFGRGRGRGGRGRGNRY* |
| Coding | >Ani_SJS100_1|g8654.t1 ATGGAGATGCCAACTTCGGAGTCTTCCTCGATTCGGGTCGCGTTTGAAGGATGTGGCCATGGATGTCTTCATGAC ATCTATGCGTCAGTCGATAAGGCTGCCGCTCTCAAGGGCTGGGATGGTGTCGATTTAGTGATCATTGGCGGCGAT TTCCAGGCCGTCAGAAATGCCAATGACCTGGCCTGCATGTCGGTGCCAATGAAGTACAGAGAATTGGGAGACTTT CATGAATACTACAGTGGGCAGCGTGTTGCTCCCTACCTCACAATCTTTGTTGGCGGCAACCACGAAGCTAGCAAC CACATGTTTGAACTCTACTATGGAGGGTGGGTAGCCCCGAATATCTACTACCTCGGTGCGGCCAACGTCATCCGG TGTGGGCCCCTTCGCATCGCCGGAATGTCTGGCATATGGAAGGGATATGACTATCGGCGGCCTCATTTTGAGAGG CTGCCTTACAATAGTGATGATGTTCAAAGCATCTATCACATCAGAGAACTCGACGTCCGGAAATTGCTCCAAATC CGTACACAAGTTGATCTGGGATTATCCCACGACTGGCCTAAGCAGGTCGAGCGTAGCGGAGACTTTGAGACTTTG TTCAGAAAGAAGCTTGGATTCCGCGAGGATTCCCAGAATGGCCGACTTGGTAGCATGGCTGCTAAGCATGTTCTT GATCGGCTGCGCCCAGCCTATTGGTTCTCGGCACATCTACACGTTAAATTCGCGGCCCTAGTTCAGCATGCCGAG TATGTTGTTCCTGAGCATCCAGCTGCTAAGAGGCAGGCTGCCACCGCTCCAACTGATGCCAGTCAGAGTTCAAGC GCTCCACAGGCATTTGCGCTGGATGGTGCCGTATTCACTTCGCTGGTTCTCGGTGAAGAGAACCCATTGAATGAG CATATGGCCTCCGCTTCTACTGCAAAGTCTGGTAAGCCAAATGAAAGCCACGCTGTAAATACCGGAGATTCTCAG CTGCAGTCGGAGAGTGGACAACCTGCTCGTCAGCCATCCAAAACCGACGCATCGGCCGGAGAAGCAGCTGGCGAC ATGGCGACTAAGCTATCAGCGTGGAATAACTTCCACGCGGTTGCTGCCCGAAATGAAGCGGCTGAGAATGATCTC TATTTGTCGGGCAAGGCACAGAATCATGGACCCAACCCTTATGAGATCAAGCACAACCTGACCTGGAAAAGGGTT GAGACTGACATGGATGGCGTTAATCGAAAGATTGCAAGCGTCGAGAGAGAAGTTAGCCCTGACCGCCAAAGCAAT AAAAAGCAGAAGGTTCAGCATGAGTCTGAAGTAGTGAAGAATAGCGACGAGATCGACCTAGATCTAGACAGTGAC TCTGATGACGCATCTAGTAAGGCGCAGCCTGAAACAGCAGTTTCAGGAAATACTGGCTCTCCCACGCACACGCCT ACGACAAACCAAATGGAACGCGATAATGGCAACGCCCAAGCAGAACCAGACAAAGCGGCTGATGTCGCGCAGGAT GTGCGCAACCAGCTGCCTGCCAGCTTCGCACGTCCACAGCCTGATCCGTATCCGGTCAATGGCCCCTTGCCCGAG GCAATCTCCAACAAGATGACTAGTTTTCTTGCATTGGATAAATGCCTACCAAACCGCGAATTTCTCCAGCTCCTT GAGATCAATCCTATTTCGGACTTAGATGGGGCGAAGGTTGAACGCCCATATCGCTTGCAATACGATAAGGAATGG CTGGCAATCACACGTGCGTTTGCCAATGACCTTCACCTTGGTGATCCCAACGCCAGACCCTCTGCGGATAAGGGC GACGTCGTTTACCGACCCCAGATTCTTGAAGAGGAGAAGTGGGTCGAGCAGAACGTTGTTAAGCCTGGAAAGCTT GTCGTCCCGGAGAACTTCACTCAAACGGCGCCCGTCTACGATCCCGCCGTACCTCTGACGACTGAAGAGATGCCA ATGGAGTACACCAATCCTCAGACCACCGAATTTTGCGAGTTGATTGGTATTGAAAATAAATTCGACATGAGTGAC GCCGAACGCCAGGCTAGAATGGCTCGGGGGCCCCGTCCTAATAGCAACAGAGGCGGCATGAACCGTCCTCCTCGT CGTGGCGGCTTTGGACGGGGTCGCGGACGCGGTGGTCGTGGACGCGGCAACCGTTACTGA |
| Transcript | >Ani_SJS100_1|g8654.t1 ATGGAGATGCCAACTTCGGAGTCTTCCTCGATTCGGGTCGCGTTTGAAGGATGTGGCCATGGATGTCTTCATGAC ATCTATGCGTCAGTCGATAAGGCTGCCGCTCTCAAGGGCTGGGATGGTGTCGATTTAGTGATCATTGGCGGCGAT TTCCAGGCCGTCAGAAATGCCAATGACCTGGCCTGCATGTCGGTGCCAATGAAGTACAGAGAATTGGGAGACTTT CATGAATACTACAGTGGGCAGCGTGTTGCTCCCTACCTCACAATCTTTGTTGGCGGCAACCACGAAGCTAGCAAC CACATGTTTGAACTCTACTATGGAGGGTGGGTAGCCCCGAATATCTACTACCTCGGTGCGGCCAACGTCATCCGG TGTGGGCCCCTTCGCATCGCCGGAATGTCTGGCATATGGAAGGGATATGACTATCGGCGGCCTCATTTTGAGAGG CTGCCTTACAATAGTGATGATGTTCAAAGCATCTATCACATCAGAGAACTCGACGTCCGGAAATTGCTCCAAATC CGTACACAAGTTGATCTGGGATTATCCCACGACTGGCCTAAGCAGGTCGAGCGTAGCGGAGACTTTGAGACTTTG TTCAGAAAGAAGCTTGGATTCCGCGAGGATTCCCAGAATGGCCGACTTGGTAGCATGGCTGCTAAGCATGTTCTT GATCGGCTGCGCCCAGCCTATTGGTTCTCGGCACATCTACACGTTAAATTCGCGGCCCTAGTTCAGCATGCCGAG TATGTTGTTCCTGAGCATCCAGCTGCTAAGAGGCAGGCTGCCACCGCTCCAACTGATGCCAGTCAGAGTTCAAGC GCTCCACAGGCATTTGCGCTGGATGGTGCCGTATTCACTTCGCTGGTTCTCGGTGAAGAGAACCCATTGAATGAG CATATGGCCTCCGCTTCTACTGCAAAGTCTGGTAAGCCAAATGAAAGCCACGCTGTAAATACCGGAGATTCTCAG CTGCAGTCGGAGAGTGGACAACCTGCTCGTCAGCCATCCAAAACCGACGCATCGGCCGGAGAAGCAGCTGGCGAC ATGGCGACTAAGCTATCAGCGTGGAATAACTTCCACGCGGTTGCTGCCCGAAATGAAGCGGCTGAGAATGATCTC TATTTGTCGGGCAAGGCACAGAATCATGGACCCAACCCTTATGAGATCAAGCACAACCTGACCTGGAAAAGGGTT GAGACTGACATGGATGGCGTTAATCGAAAGATTGCAAGCGTCGAGAGAGAAGTTAGCCCTGACCGCCAAAGCAAT AAAAAGCAGAAGGTTCAGCATGAGTCTGAAGTAGTGAAGAATAGCGACGAGATCGACCTAGATCTAGACAGTGAC TCTGATGACGCATCTAGTAAGGCGCAGCCTGAAACAGCAGTTTCAGGAAATACTGGCTCTCCCACGCACACGCCT ACGACAAACCAAATGGAACGCGATAATGGCAACGCCCAAGCAGAACCAGACAAAGCGGCTGATGTCGCGCAGGAT GTGCGCAACCAGCTGCCTGCCAGCTTCGCACGTCCACAGCCTGATCCGTATCCGGTCAATGGCCCCTTGCCCGAG GCAATCTCCAACAAGATGACTAGTTTTCTTGCATTGGATAAATGCCTACCAAACCGCGAATTTCTCCAGCTCCTT GAGATCAATCCTATTTCGGACTTAGATGGGGCGAAGGTTGAACGCCCATATCGCTTGCAATACGATAAGGAATGG CTGGCAATCACACGTGCGTTTGCCAATGACCTTCACCTTGGTGATCCCAACGCCAGACCCTCTGCGGATAAGGGC GACGTCGTTTACCGACCCCAGATTCTTGAAGAGGAGAAGTGGGTCGAGCAGAACGTTGTTAAGCCTGGAAAGCTT GTCGTCCCGGAGAACTTCACTCAAACGGCGCCCGTCTACGATCCCGCCGTACCTCTGACGACTGAAGAGATGCCA ATGGAGTACACCAATCCTCAGACCACCGAATTTTGCGAGTTGATTGGTATTGAAAATAAATTCGACATGAGTGAC GCCGAACGCCAGGCTAGAATGGCTCGGGGGCCCCGTCCTAATAGCAACAGAGGCGGCATGAACCGTCCTCCTCGT CGTGGCGGCTTTGGACGGGGTCGCGGACGCGGTGGTCGTGGACGCGGCAACCGTTACTGA |
| Gene | >Ani_SJS100_1|g8654.t1 ATGGAGATGCCAACTTCGGAGTCTTCCTCGATTCGGGTCGCGTTTGAAGGATGTGTAAGTCAACTTTACATTTCT ATACCTTGTACTTATTATCTTGCTGACCACAGAAACTTCTCTAGGGCCATGGATGTCTTCATGACATCTATGCGT CAGTCGATAAGGCTGCCGCTCTCAAGGGCTGGGATGGTGTCGATTTAGTGATCATTGGCGGCGATTTCCAGGTAG GACTTATATTGCCCCTGTCAACTTTCCTGCCTCTCCAGCTAACCTCAACCTAGGCCGTCAGAAATGCCAATGACC TGGCCTGCATGTCGGTGCCAATGAAGTACAGAGAATTGGGAGACTTTCATGAATACTACAGTGGGCAGCGTGTTG CTCCCTACCTCACAATCTTTGTTGGCGGCAACCACGAAGCTAGCAACCACATGTTTGAACTCTACTATGGAGGGT GGGTAGCCCCGAATATCTACTACCTCGGTGCGGCCAACGTCATCCGGTGTGGGCCCCTTCGCATCGCCGGAATGT CTGGCATATGGAAGGGATATGACTATCGGCGGCCTCATTTTGAGAGGCTGCCTTACAATAGTGATGATGTTCAAA GCATCTATCACATCAGAGAACTCGACGTCCGGAAATTGCTCCAAATCCGTACACAAGTTGATCTGGGATTATCCC ACGACTGGCCTAAGCAGGTCGAGCGTAGCGGAGACTTTGAGACTTTGTTCAGAAAGAAGCTTGGATTCCGCGAGG ATTCCCAGAATGGCCGACTTGGTAGCATGGCTGCTAAGCATGTTCTTGATCGGCTGCGCCCAGCCTATTGGTTCT CGGCACATCTACACGTTAAATTCGCGGCCCTAGTTCAGCATGCCGAGTATGTTGTTCCTGAGCATCCAGCTGCTA AGAGGCAGGCTGCCACCGCTCCAACTGATGCCAGTCAGAGTTCAAGCGCTCCACAGGCATTTGCGCTGGATGGTG CCGTATTCACTTCGCTGGTTCTCGGTGAAGAGAACCCATTGAATGAGCATATGGCCTCCGCTTCTACTGCAAAGT CTGGTAAGCCAAATGAAAGCCACGCTGTAAATACCGGAGATTCTCAGCTGCAGTCGGAGAGTGGACAACCTGCTC GTCAGCCATCCAAAACCGACGCATCGGCCGGAGAAGCAGCTGGCGACATGGCGACTAAGCTATCAGCGTGGAATA ACTTCCACGCGGTTGCTGCCCGAAATGAAGCGGCTGAGAATGATCTCTATTTGTCGGGCAAGGCACAGAATCATG GACCCAACCCTTATGAGATCAAGCACAACCTGACCTGGAAAAGGGTTGAGACTGACATGGATGGCGTTAATCGAA AGATTGCAAGCGTCGAGAGAGAAGTTAGCCCTGACCGCCAAAGCAATAAAAAGCAGAAGGTTCAGCATGAGTCTG AAGTAGTGAAGAATAGCGACGAGATCGACCTAGATCTAGACAGTGACTCTGATGACGCATCTAGTAAGGCGCAGC CTGAAACAGCAGTTTCAGGAAATACTGGCTCTCCCACGCACACGCCTACGACAAACCAAATGGAACGCGATAATG GCAACGCCCAAGCAGAACCAGACAAAGCGGCTGATGTCGCGCAGGATGTGCGCAACCAGCTGCCTGCCAGCTTCG CACGTCCACAGCCTGATCCGTATCCGGTCAATGGCCCCTTGCCCGAGGCAATCTCCAACAAGATGACTAGTTTTC TTGCATTGGATAAATGCCTACCAAACCGCGAATTTCTCCAGCTCCTTGAGATCAATCCTATTTCGGACTTAGATG GGGCGAAGGTTGAACGCCCATATCGCTTGCAATACGATAAGGAATGGCTGGCAATCACACGTGCGTTTGCCAATG ACCTTCACCTTGGTGATCCCAACGCCAGACCCTCTGCGGATAAGGGCGACGTCGTTTACCGACCCCAGATTCTTG AAGAGGAGAAGTGGGTCGAGCAGAACGTTGTTAAGCCTGGAAAGCTTGTCGTCCCGGAGAACTTCACTCAAACGG CGCCCGTCTACGATCCCGCCGTACCTCTGACGACTGAAGAGATGCCAATGGAGTACACCAATCCTCAGACCACCG AATTTTGCGAGTTGATTGGTATTGAAAATAAATTCGACATGAGTGACGCCGAACGCCAGGCTAGAATGGCTCGGG GGCCCCGTCCTAATAGCAACAGAGGCGGCATGAACCGTCCTCCTCGTCGTGGCGGCTTTGGACGGGGTCGCGGAC GCGGTGGTCGTGGACGCGGCAACCGTTACTGA |