© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g8640.t1 |
| Gene name | |
| Location | scaffold_070:26632..28792 |
| Strand | + |
| Gene length (bp) | 2160 |
| Transcript length (bp) | 2160 |
| Coding sequence length (bp) | 2160 |
| Protein length (aa) | 720 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02518 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 6.5E-24 | 447 | 564 |
| PF00072 | Response_reg | Response regulator receiver domain | 2.0E-22 | 601 | 711 |
| PF00512 | HisKA | His Kinase A (phospho-acceptor) domain | 1.1E-16 | 337 | 401 |
| PF13426 | PAS_9 | PAS domain | 5.1E-12 | 216 | 318 |
| PF08448 | PAS_4 | PAS fold | 1.8E-07 | 217 | 320 |
| PF00989 | PAS | PAS fold | 5.4E-09 | 216 | 315 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0007165 | signal transduction | Yes |
| GO:0000160 | phosphorelay signal transduction system | Yes |
| GO:0000155 | phosphorelay sensor kinase activity | Yes |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0065007 | biological regulation | No |
| GO:0016740 | transferase activity | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0004673 | protein histidine kinase activity | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0140299 | small molecule sensor activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
| GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0004672 | protein kinase activity | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0016301 | kinase activity | No |
| GO:0035556 | intracellular signal transduction | No |
| GO:0008150 | biological_process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0003824 | catalytic activity | No |
| GO:0009889 | regulation of biosynthetic process | No |
| Orthofinder run ID | 3 |
| Orthogroup | 8783 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g8640.t1 MDLNKRLFHLDIENKTQAQPLNFSMVTTPPDDEDDDEVNHLKLKVESKQSPHDHDKPHHRQKKMPDTDAQQPPAA LGRIYRYTPTPSVILDPSLHVVEVSDSHVAFAGLSRALLLGRFICDICPRILPALDVAILFGALRAAITTQDVQS IDKICIDDASTCYTLRITPIFENSNLLYIVLEALDITKRQATSVSKPHESYSNETYKVLLDTVKDYAIFMLDTHG HIVTWNTGAALLKGYSAKEIIGRHFSTFYSLEDRMADKPGKELEVCLREGKVEDEGWRYRKDGSRFWANVLITPM YALGRHIGFTKVTRDLTERNAAETRMIAAFEESSRLKTDFLANMSHEIRTPMNGMLLALTSLLATDLNEQQREYS SIIEDSTNVLLQVINDVLDYSKLSSGSFTLHPDTFSVDSITNAVVRNCKGALRTGVQLTSSISSNFPSQVEGDPL RYRQVLQNLVGNAVKFTEEGYVKINTTFSEDAEDPSVYYIRTEVADTGVGVPEDALGSLFTPFTRFAETGSKRYQ GTGLGLSICKSLAELMDGSVGYRPNPERHGSVFWVTAKMHRVRVAPPARTTGTGTPVEDVGDIERNIHDIAPHKH VLLVEDNLVNQMMMLKLLQNMGFARIDTAWDGAEAVRLVKQQPLSYNTILMDIGMPVLDGVQATRQIRQMGLEMP IIALTGNVMPGDIEDYAKQGMSDHIGKPIHQKQLMRLLWKWMGT* |
| Coding | >Ani_SJS100_1|g8640.t1 ATGGATCTCAACAAACGCCTGTTCCATCTCGATATCGAGAATAAGACCCAAGCGCAACCTCTCAACTTCTCTATG GTAACCACACCACCGGATGATGAGGATGATGACGAGGTGAACCATCTAAAGCTCAAGGTCGAGTCGAAACAATCT CCTCACGATCATGACAAGCCGCATCACCGTCAAAAGAAGATGCCCGATACCGATGCGCAGCAACCTCCAGCGGCT CTAGGTCGAATATATCGCTATACCCCCACTCCCAGCGTCATTCTTGATCCTTCGTTACATGTCGTGGAGGTATCG GATTCCCACGTGGCATTTGCCGGGCTGTCAAGGGCGCTGTTGCTCGGCCGGTTCATCTGTGACATCTGTCCACGC ATCCTGCCGGCTCTAGATGTTGCTATTCTTTTTGGCGCATTGCGCGCCGCCATCACGACGCAGGACGTCCAGTCG ATTGACAAAATCTGTATAGATGACGCTAGCACTTGCTATACTCTTCGCATCACCCCCATCTTTGAAAACTCTAAC CTGTTATACATTGTCCTGGAGGCACTTGATATCACCAAGCGTCAGGCTACATCGGTGTCCAAGCCCCATGAGTCT TACTCCAATGAGACTTACAAAGTCCTACTGGACACGGTCAAGGACTATGCCATCTTCATGCTCGACACACATGGC CATATTGTAACTTGGAACACGGGAGCGGCCCTGCTGAAAGGGTACTCGGCCAAGGAGATCATCGGACGTCACTTT TCCACCTTCTATAGCCTGGAGGATCGCATGGCGGATAAGCCCGGCAAAGAACTGGAGGTATGTCTCCGGGAGGGC AAAGTGGAGGACGAAGGCTGGCGGTACCGCAAGGACGGTTCGCGGTTCTGGGCCAACGTGCTGATCACTCCCATG TACGCCCTGGGTCGCCATATTGGCTTCACCAAGGTCACTCGCGATTTAACGGAACGCAATGCAGCCGAAACCCGC ATGATCGCAGCCTTTGAAGAATCGTCGAGATTAAAGACAGACTTCTTGGCCAACATGAGCCATGAGATTCGCACG CCAATGAACGGCATGCTCTTAGCCCTTACATCACTGCTGGCCACGGACTTGAACGAACAGCAGCGCGAATATTCC TCTATCATCGAAGATTCGACCAATGTTTTGCTCCAAGTCATCAATGACGTCCTCGACTATTCGAAATTGTCATCC GGGTCTTTTACTCTGCATCCTGATACTTTCAGTGTCGACAGTATTACCAACGCCGTCGTGCGCAACTGCAAGGGC GCTCTGAGAACCGGTGTCCAACTGACTAGCTCTATCTCATCCAACTTCCCATCCCAGGTCGAGGGTGATCCGTTG CGGTACCGTCAGGTCCTTCAGAATCTTGTCGGCAATGCAGTCAAGTTCACCGAGGAGGGCTACGTCAAGATCAAC ACCACCTTCTCGGAAGATGCGGAGGATCCTAGTGTATATTACATCCGGACGGAGGTTGCCGATACGGGCGTTGGC GTTCCCGAAGATGCTCTTGGCTCATTGTTCACACCGTTCACACGCTTCGCCGAGACTGGTTCGAAGAGATACCAA GGCACGGGCCTTGGCTTATCGATCTGCAAAAGCTTGGCCGAACTCATGGACGGAAGTGTCGGATACCGACCTAAT CCTGAGAGACATGGCAGTGTCTTCTGGGTCACAGCCAAGATGCATCGGGTGCGTGTGGCGCCGCCCGCTAGAACG ACTGGGACAGGGACACCCGTTGAAGACGTCGGTGACATTGAACGAAATATCCACGACATCGCTCCTCACAAACAC GTTCTCCTGGTTGAGGACAACCTGGTTAACCAGATGATGATGCTCAAGCTTCTCCAGAACATGGGCTTCGCGCGG ATTGATACTGCATGGGATGGGGCAGAGGCGGTTCGACTGGTGAAGCAGCAGCCTTTATCCTACAATACAATTCTT ATGGATATCGGCATGCCGGTGCTGGATGGCGTACAGGCGACACGACAGATCCGGCAAATGGGACTAGAGATGCCT ATCATTGCGCTTACGGGGAACGTCATGCCGGGAGATATAGAGGATTATGCGAAGCAGGGAATGAGCGATCATATT GGGAAACCAATCCACCAGAAACAGTTAATGCGTTTGCTCTGGAAGTGGATGGGGACATGA |
| Transcript | >Ani_SJS100_1|g8640.t1 ATGGATCTCAACAAACGCCTGTTCCATCTCGATATCGAGAATAAGACCCAAGCGCAACCTCTCAACTTCTCTATG GTAACCACACCACCGGATGATGAGGATGATGACGAGGTGAACCATCTAAAGCTCAAGGTCGAGTCGAAACAATCT CCTCACGATCATGACAAGCCGCATCACCGTCAAAAGAAGATGCCCGATACCGATGCGCAGCAACCTCCAGCGGCT CTAGGTCGAATATATCGCTATACCCCCACTCCCAGCGTCATTCTTGATCCTTCGTTACATGTCGTGGAGGTATCG GATTCCCACGTGGCATTTGCCGGGCTGTCAAGGGCGCTGTTGCTCGGCCGGTTCATCTGTGACATCTGTCCACGC ATCCTGCCGGCTCTAGATGTTGCTATTCTTTTTGGCGCATTGCGCGCCGCCATCACGACGCAGGACGTCCAGTCG ATTGACAAAATCTGTATAGATGACGCTAGCACTTGCTATACTCTTCGCATCACCCCCATCTTTGAAAACTCTAAC CTGTTATACATTGTCCTGGAGGCACTTGATATCACCAAGCGTCAGGCTACATCGGTGTCCAAGCCCCATGAGTCT TACTCCAATGAGACTTACAAAGTCCTACTGGACACGGTCAAGGACTATGCCATCTTCATGCTCGACACACATGGC CATATTGTAACTTGGAACACGGGAGCGGCCCTGCTGAAAGGGTACTCGGCCAAGGAGATCATCGGACGTCACTTT TCCACCTTCTATAGCCTGGAGGATCGCATGGCGGATAAGCCCGGCAAAGAACTGGAGGTATGTCTCCGGGAGGGC AAAGTGGAGGACGAAGGCTGGCGGTACCGCAAGGACGGTTCGCGGTTCTGGGCCAACGTGCTGATCACTCCCATG TACGCCCTGGGTCGCCATATTGGCTTCACCAAGGTCACTCGCGATTTAACGGAACGCAATGCAGCCGAAACCCGC ATGATCGCAGCCTTTGAAGAATCGTCGAGATTAAAGACAGACTTCTTGGCCAACATGAGCCATGAGATTCGCACG CCAATGAACGGCATGCTCTTAGCCCTTACATCACTGCTGGCCACGGACTTGAACGAACAGCAGCGCGAATATTCC TCTATCATCGAAGATTCGACCAATGTTTTGCTCCAAGTCATCAATGACGTCCTCGACTATTCGAAATTGTCATCC GGGTCTTTTACTCTGCATCCTGATACTTTCAGTGTCGACAGTATTACCAACGCCGTCGTGCGCAACTGCAAGGGC GCTCTGAGAACCGGTGTCCAACTGACTAGCTCTATCTCATCCAACTTCCCATCCCAGGTCGAGGGTGATCCGTTG CGGTACCGTCAGGTCCTTCAGAATCTTGTCGGCAATGCAGTCAAGTTCACCGAGGAGGGCTACGTCAAGATCAAC ACCACCTTCTCGGAAGATGCGGAGGATCCTAGTGTATATTACATCCGGACGGAGGTTGCCGATACGGGCGTTGGC GTTCCCGAAGATGCTCTTGGCTCATTGTTCACACCGTTCACACGCTTCGCCGAGACTGGTTCGAAGAGATACCAA GGCACGGGCCTTGGCTTATCGATCTGCAAAAGCTTGGCCGAACTCATGGACGGAAGTGTCGGATACCGACCTAAT CCTGAGAGACATGGCAGTGTCTTCTGGGTCACAGCCAAGATGCATCGGGTGCGTGTGGCGCCGCCCGCTAGAACG ACTGGGACAGGGACACCCGTTGAAGACGTCGGTGACATTGAACGAAATATCCACGACATCGCTCCTCACAAACAC GTTCTCCTGGTTGAGGACAACCTGGTTAACCAGATGATGATGCTCAAGCTTCTCCAGAACATGGGCTTCGCGCGG ATTGATACTGCATGGGATGGGGCAGAGGCGGTTCGACTGGTGAAGCAGCAGCCTTTATCCTACAATACAATTCTT ATGGATATCGGCATGCCGGTGCTGGATGGCGTACAGGCGACACGACAGATCCGGCAAATGGGACTAGAGATGCCT ATCATTGCGCTTACGGGGAACGTCATGCCGGGAGATATAGAGGATTATGCGAAGCAGGGAATGAGCGATCATATT GGGAAACCAATCCACCAGAAACAGTTAATGCGTTTGCTCTGGAAGTGGATGGGGACATGA |
| Gene | >Ani_SJS100_1|g8640.t1 ATGGATCTCAACAAACGCCTGTTCCATCTCGATATCGAGAATAAGACCCAAGCGCAACCTCTCAACTTCTCTATG GTAACCACACCACCGGATGATGAGGATGATGACGAGGTGAACCATCTAAAGCTCAAGGTCGAGTCGAAACAATCT CCTCACGATCATGACAAGCCGCATCACCGTCAAAAGAAGATGCCCGATACCGATGCGCAGCAACCTCCAGCGGCT CTAGGTCGAATATATCGCTATACCCCCACTCCCAGCGTCATTCTTGATCCTTCGTTACATGTCGTGGAGGTATCG GATTCCCACGTGGCATTTGCCGGGCTGTCAAGGGCGCTGTTGCTCGGCCGGTTCATCTGTGACATCTGTCCACGC ATCCTGCCGGCTCTAGATGTTGCTATTCTTTTTGGCGCATTGCGCGCCGCCATCACGACGCAGGACGTCCAGTCG ATTGACAAAATCTGTATAGATGACGCTAGCACTTGCTATACTCTTCGCATCACCCCCATCTTTGAAAACTCTAAC CTGTTATACATTGTCCTGGAGGCACTTGATATCACCAAGCGTCAGGCTACATCGGTGTCCAAGCCCCATGAGTCT TACTCCAATGAGACTTACAAAGTCCTACTGGACACGGTCAAGGACTATGCCATCTTCATGCTCGACACACATGGC CATATTGTAACTTGGAACACGGGAGCGGCCCTGCTGAAAGGGTACTCGGCCAAGGAGATCATCGGACGTCACTTT TCCACCTTCTATAGCCTGGAGGATCGCATGGCGGATAAGCCCGGCAAAGAACTGGAGGTATGTCTCCGGGAGGGC AAAGTGGAGGACGAAGGCTGGCGGTACCGCAAGGACGGTTCGCGGTTCTGGGCCAACGTGCTGATCACTCCCATG TACGCCCTGGGTCGCCATATTGGCTTCACCAAGGTCACTCGCGATTTAACGGAACGCAATGCAGCCGAAACCCGC ATGATCGCAGCCTTTGAAGAATCGTCGAGATTAAAGACAGACTTCTTGGCCAACATGAGCCATGAGATTCGCACG CCAATGAACGGCATGCTCTTAGCCCTTACATCACTGCTGGCCACGGACTTGAACGAACAGCAGCGCGAATATTCC TCTATCATCGAAGATTCGACCAATGTTTTGCTCCAAGTCATCAATGACGTCCTCGACTATTCGAAATTGTCATCC GGGTCTTTTACTCTGCATCCTGATACTTTCAGTGTCGACAGTATTACCAACGCCGTCGTGCGCAACTGCAAGGGC GCTCTGAGAACCGGTGTCCAACTGACTAGCTCTATCTCATCCAACTTCCCATCCCAGGTCGAGGGTGATCCGTTG CGGTACCGTCAGGTCCTTCAGAATCTTGTCGGCAATGCAGTCAAGTTCACCGAGGAGGGCTACGTCAAGATCAAC ACCACCTTCTCGGAAGATGCGGAGGATCCTAGTGTATATTACATCCGGACGGAGGTTGCCGATACGGGCGTTGGC GTTCCCGAAGATGCTCTTGGCTCATTGTTCACACCGTTCACACGCTTCGCCGAGACTGGTTCGAAGAGATACCAA GGCACGGGCCTTGGCTTATCGATCTGCAAAAGCTTGGCCGAACTCATGGACGGAAGTGTCGGATACCGACCTAAT CCTGAGAGACATGGCAGTGTCTTCTGGGTCACAGCCAAGATGCATCGGGTGCGTGTGGCGCCGCCCGCTAGAACG ACTGGGACAGGGACACCCGTTGAAGACGTCGGTGACATTGAACGAAATATCCACGACATCGCTCCTCACAAACAC GTTCTCCTGGTTGAGGACAACCTGGTTAACCAGATGATGATGCTCAAGCTTCTCCAGAACATGGGCTTCGCGCGG ATTGATACTGCATGGGATGGGGCAGAGGCGGTTCGACTGGTGAAGCAGCAGCCTTTATCCTACAATACAATTCTT ATGGATATCGGCATGCCGGTGCTGGATGGCGTACAGGCGACACGACAGATCCGGCAAATGGGACTAGAGATGCCT ATCATTGCGCTTACGGGGAACGTCATGCCGGGAGATATAGAGGATTATGCGAAGCAGGGAATGAGCGATCATATT GGGAAACCAATCCACCAGAAACAGTTAATGCGTTTGCTCTGGAAGTGGATGGGGACATGA |